ClCG05G007350 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGATTTATATTACTATTGTATCTCCGTTTTCTCTTCGAGTCAGGGGAATTTTTTTGGATCGGTTGACTCTTCTTCAACGTCACTAATCTTGGGGGGAAATCAGATCTTCCACAACTAAGCGAAGCATTTCAGCTGAATCTTTGTCGGGCAGCTTGATTTTCTTGCTGGGGTTAGTAAGAATCGTTTGCATCTTTCTCTTTTGTTGTTCTTCACTTTGATCTTTGCATTTTTCATAGTCCCGGAGAAAAATTAGTAGAAGGGTCGATTTCTTTTTTTGCCCCCAAGGTTTGATTCTTATAAGTTTGAATATAAATCGTTTCTTCCCCGTTCTGTCGATGCAATGCTTTTGAAATGATGGGAGATTGTTGGATTGGATGCAAATTTCTTACAATTTTCAGTTTCCCAGAAACATAAATTGTGGGGTTCTTGATTTATTGATTCTATTTTGTCGGTGAATGATTTCAGATGGGGGATGGGGCTGCGCCTTCTCGGTATGTGAAATTGAAGAAAGATCAAGCGCCTCTGGAAGATATCAAGCCAGGGGAGCTTAACCAGCCCATTGAAGTTCCTCAGGTTAATTGAGGGGGCAAAAGCATACATTACTTGGAATTATTTTTGCTATTGTTTCTTACTCACATTTCTCTCTGTAGATTCGAGCTTTTCTGTTGATATCATTGGGGTTTTATATATATATGGGGGTAGAATTTGCAAAGCAAATTTGGGTATCACTTAATGATTTTGTAGTTTTGTTTGTAGATCCAATTGTGAGACAATTTACTAGTAGTGAATGTTTTTCTAGAAGTGGTGTATTTCGATGTAAAAGTTCCCTAAATAAATGTCATAGAAAATGTAGAATTAGTGAAGAGTATATCACATATGCAATGAGTCCAGTGAGGCTATACTCAAAGGAGCAAGGTAGACATTTGTTTATGAGGTGATAGGTTAAACTTGTGGTGGCCTTTTTTTAACATTAAAAGTTGTAGGGTTTGCTGTTTATTAAGATTGATGAATGTTAAACAATGGAGGAATGCTAAACTTCGAGGATGTTTCCCTGTTCCTGTTTATTGTGTGTCAATAATGTCCTAACAACACGCATATTTGTTAGACTGTTCGTTTGTTTGATGTTGATGGCACTGTTCGTTTTTTAGCTGTTGATGGCATTGTTCATTTGTTAGATGCTGATAATGATGGCATTGTTAAGGCAAGTTTGGAAGTCATTTTGAAATCACTCTAAAGCACACCTTTAATTACTCGAAATCAAATTAATGTTTAATTTTACACTTCTAAATGCACTTTTCATACTATGAAAAATGATTTTTGATTTTGAATGATTAAAGGCATTTTATGAGTGATTTTGAAAATGACAAAAGTGATTTCAACCATTTTAGAATCACTCCCTAACATGCTATTAGTCAGGTTGTTTAAGTGGTGTCTCTAGGGATATAATCAATAGAAACTTCAAGCCACGTATTCTGAAATTTTTATCTGATATCAACCATCTTTTCTTCTGTAGTAAAGTCTTCCATTACACTGGAGCAGTTTTGGATTTCAGATTTCTTGATTTTCATCTGTTTGACTTCTTTATATGCATACTATAATTCTTTTGCAGATACTATTCTATGGTTTTCTGGGTTGTGCTTTTTATATTATGTGTATGGCCATTTATATAATTTTGATAGGAACTTTTTAAGAATATCCTTGGGAAAACTAAAAAACATACCATTTTCAATTGCAATCCTCTGGCTAAATTTCAGTTAAATGTAAGAAAATGTAACGAGTGTGGACAGCCGCTACCTGAAAGCTTTGAGCCTCCAGCGGATGAACCTTGGACAACTGGGATTTTTGGCTGCGCTGAAGATCCGCAAAGTTGTAAGTTTCCATATATATAGTATTCTTCTTAATCTATGGTTCTTAGATGGGATCTTGGTAAACAGCTTTGCATTATGATTATGATAAAAATTTCTCCAAATTATTTCTAAGATTAAAGCTTGTCCGTGATACACTTTCTTTTGAGTTATGCCCGTGTTTCTGAACATTAAACCTTGTTAAGTGAATTGTAGAAATAACCTGATATTATATGTGGAGTAATTATGAAAGAGTGAGAAAGGATGTTTGTGTTTACTCAAGGCAAGAGTGAATTTTGGATGACTTTTGAAAGTTCTGGTTTTCAAGTAAAAATACTTCTATAGCACTTTTTTTAGGAGCACTATGTTTGCATTGACTTTTAAGCAAGTTTTTCTTCAGAACACTTTGAATTTAGAAGTTTCAACATTGCTTCCAATTTTTAAACATTATGGAAACTTTGAGATGTGTTATTTACCATTACCTCCCTTCCTATCCTTACCTAAACTATGAACTCTTCCGAGTTCCCTTAGATTCCTTGCTCTCTTTCCACGTCTAGCATACATTGAACGTTTGGAAAACCTTGTAAATGTAAAAAATTGATACTTCTGCAATTGTACACTTGGCGTTGCTCGTTACATATGCCAATTTCGTGCATACAGGCTGGACTGGACTGTTTTGTCCATGCGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGATTGGACGAGGCCATGTGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCAACGGCAACTGCAGCGCTCCATTGCATTGATCCAAACACGACATTTCTCATTTGTGAGGGATTATTGTTTACGTGGTGGATGTGTGGCATATACACTGGACTCGTCCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGGTAATATTCTGTTTATGTGCTTAACTAGATGCTAACTATTATTATTATTATTTTTTTTTAATGATTGTCAAGCATATTGAATAAAAGCATCACTTGTTCTGGAACTGTTTGTTTCATGTTTTGTCAAGTGTCCTTTCATCTGTTTTATGAGGAGAAAATCTCCCAGAATTTTCCGGACCGTGTTATATATCTAGTTTAAAACTGTTTCATTCTCTTCTTTTGGGATATTGTTTTGCGGGCTTTTGGATGGTTTTTACATGTCATAATACCATTTTTGATACTTTGGCTTCCTTATGGGTGGGTCATCATTTTGGTGGTATTAAGAAGACGTTTTGGTTGGATATGTTGCATGCTTTCTTTTGGAGTTTGTGGGGTGAAAGAAGTAGAGGCTTTTTCGTGACTCTTTTTCCTCCTTCAATAATAATTTTATTATTATTATGGAGTTGGTTTTGTCTATTGCTTTTTTTTTTTTTTTTTCGCAAAGCAAAGCACCCTTTCATTCTTTATAGTCTATCTTTGTTAGTCTAATTGGTACTCTCTTTTGTAATCACCTTTAGGTATTTGGTGCTCTTCCCTGATTTCGTTAAGATGTCTCTTTTACTAAAAACAGTTTCGTTCTCCCATGTTGGTATGATGATGTTTTTCTATGATTGTCGTGCACTGAAATATGGACTGTGACAAGCCTGGAAAGAATAACCTTCCTTTGTGGGGAAGCTCGAATAGTTCGATCTAAGACAGTAGCTCGAGTTACACTTTAGAAACTCATGACATAATTCAATAATGTGATGGTTTAAAGCGATCGTTCCCTTTCTTTTAGACATGTGTGACCCACATTGGACCAATCGATGTTGTATGGAGTCGAGATAGTTGTTACCATCACATGTTTTCCGGTACGTGCTGTATGCTACTAATTAGTTGTACTGTTGATTGCAGAACTCCCCATGTGATCCTTGCATGACACATTGTTGCCTGCACTGGTGCGCTCTATGTCAAGAACACAGGGAGATGAAGGGACGTCTGACCGATAACTTTGCGGTGCCAATGACTATCGTGAACCCGCCACCGGTTCAAGAAATGAAGTCGGAAAATGATGATGAAGGCACAACTTCATCTTCCAACATGGGCAATGGGCAGACCAATTTGGAAATGCAAGCTTTGTAGATTCCATCATAGATAAGATAACCACCACAGCATACATTAGATAGTAGTTTCAATGAGCCTTTCCAAGACCAAGGGTGTAATGAACTCGCACAGTCTTGAATCATTTATATTTTAAATTTCTTTAATATTTGATTTTTTTTTT GTGATTTATATTACTATTGTATCTCCGTTTTCTCTTCGAGTCAGGGGAATTTTTTTGGATCGGTTGACTCTTCTTCAACGTCACTAATCTTGGGGGGAAATCAGATCTTCCACAACTAAGCGAAGCATTTCAGCTGAATCTTTGTCGGGCAGCTTGATTTTCTTGCTGGGATGGGGGATGGGGCTGCGCCTTCTCGGTATGTGAAATTGAAGAAAGATCAAGCGCCTCTGGAAGATATCAAGCCAGGGGAGCTTAACCAGCCCATTGAAGTTCCTCAGTTAAATGTAAGAAAATGTAACGAGTGTGGACAGCCGCTACCTGAAAGCTTTGAGCCTCCAGCGGATGAACCTTGGACAACTGGGATTTTTGGCTGCGCTGAAGATCCGCAAAGTTGCTGGACTGGACTGTTTTGTCCATGCGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGATTGGACGAGGCCATGTGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCAACGGCAACTGCAGCGCTCCATTGCATTGATCCAAACACGACATTTCTCATTTGTGAGGGATTATTGTTTACGTGGTGGATGTGTGGCATATACACTGGACTCGTCCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGTTGCCTGCACTGGTGCGCTCTATGTCAAGAACACAGGGAGATGAAGGGACGTCTGACCGATAACTTTGCGGTGCCAATGACTATCGTGAACCCGCCACCGGTTCAAGAAATGAAGTCGGAAAATGATGATGAAGGCACAACTTCATCTTCCAACATGGGCAATGGGCAGACCAATTTGGAAATGCAAGCTTTGTAGATTCCATCATAGATAAGATAACCACCACAGCATACATTAGATAGTAGTTTCAATGAGCCTTTCCAAGACCAAGGGTGTAATGAACTCGCACAGTCTTGAATCATTTATATTTTAAATTTCTTTAATATTTGATTTTTTTTTT ATGGGGGATGGGGCTGCGCCTTCTCGGTATGTGAAATTGAAGAAAGATCAAGCGCCTCTGGAAGATATCAAGCCAGGGGAGCTTAACCAGCCCATTGAAGTTCCTCAGTTAAATGTAAGAAAATGTAACGAGTGTGGACAGCCGCTACCTGAAAGCTTTGAGCCTCCAGCGGATGAACCTTGGACAACTGGGATTTTTGGCTGCGCTGAAGATCCGCAAAGTTGCTGGACTGGACTGTTTTGTCCATGCGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGATTGGACGAGGCCATGTGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCAACGGCAACTGCAGCGCTCCATTGCATTGATCCAAACACGACATTTCTCATTTGTGAGGGATTATTGTTTACGTGGTGGATGTGTGGCATATACACTGGACTCGTCCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGTTGCCTGCACTGGTGCGCTCTATGTCAAGAACACAGGGAGATGAAGGGACGTCTGACCGATAACTTTGCGGTGCCAATGACTATCGTGAACCCGCCACCGGTTCAAGAAATGAAGTCGGAAAATGATGATGAAGGCACAACTTCATCTTCCAACATGGGCAATGGGCAGACCAATTTGGAAATGCAAGCTTTGTAG MGDGAAPSRYVKLKKDQAPLEDIKPGELNQPIEVPQLNVRKCNECGQPLPESFEPPADEPWTTGIFGCAEDPQSCWTGLFCPCVLFGRNVESLRDDDMDWTRPCVCHAIFVEGGIALATATAALHCIDPNTTFLICEGLLFTWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMTHCCLHWCALCQEHREMKGRLTDNFAVPMTIVNPPPVQEMKSENDDEGTTSSSNMGNGQTNLEMQAL
BLAST of ClCG05G007350 vs. Swiss-Prot
Match: CNR6_MAIZE (Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 5.8e-97 Identity = 158/223 (70.85%), Postives = 182/223 (81.61%), Query Frame = 1
BLAST of ClCG05G007350 vs. Swiss-Prot
Match: PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20 Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 1
BLAST of ClCG05G007350 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 54/152 (35.53%), Postives = 72/152 (47.37%), Query Frame = 1
BLAST of ClCG05G007350 vs. Swiss-Prot
Match: PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 41/138 (29.71%), Postives = 57/138 (41.30%), Query Frame = 1
BLAST of ClCG05G007350 vs. Swiss-Prot
Match: CNR8_MAIZE (Cell number regulator 8 OS=Zea mays GN=CNR8 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 49/188 (26.06%), Postives = 76/188 (40.43%), Query Frame = 1
BLAST of ClCG05G007350 vs. TrEMBL
Match: A0A0A0L8B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175650 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-141 Identity = 231/239 (96.65%), Postives = 236/239 (98.74%), Query Frame = 1
BLAST of ClCG05G007350 vs. TrEMBL
Match: A0A068UHP0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025170001 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 9.6e-115 Identity = 190/239 (79.50%), Postives = 207/239 (86.61%), Query Frame = 1
BLAST of ClCG05G007350 vs. TrEMBL
Match: M1B6S6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014815 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 1.6e-114 Identity = 191/239 (79.92%), Postives = 205/239 (85.77%), Query Frame = 1
BLAST of ClCG05G007350 vs. TrEMBL
Match: A0A058ZXW7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00163 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.2e-110 Identity = 186/239 (77.82%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of ClCG05G007350 vs. TrEMBL
Match: A0A0V0HWN5_SOLCH (Putative cell number regulator 6-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.6e-109 Identity = 186/240 (77.50%), Postives = 198/240 (82.50%), Query Frame = 1
BLAST of ClCG05G007350 vs. TAIR10
Match: AT5G51400.1 (AT5G51400.1 PLAC8 family protein) HSP 1 Score: 350.5 bits (898), Expect = 8.1e-97 Identity = 156/240 (65.00%), Postives = 188/240 (78.33%), Query Frame = 1
BLAST of ClCG05G007350 vs. TAIR10
Match: AT2G45010.1 (AT2G45010.1 PLAC8 family protein) HSP 1 Score: 349.0 bits (894), Expect = 2.4e-96 Identity = 159/228 (69.74%), Postives = 187/228 (82.02%), Query Frame = 1
BLAST of ClCG05G007350 vs. TAIR10
Match: AT2G40935.1 (AT2G40935.1 PLAC8 family protein) HSP 1 Score: 101.3 bits (251), Expect = 8.5e-22 Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 1
BLAST of ClCG05G007350 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11 Identity = 41/138 (29.71%), Postives = 57/138 (41.30%), Query Frame = 1
BLAST of ClCG05G007350 vs. TAIR10
Match: AT2G37110.1 (AT2G37110.1 PLAC8 family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09 Identity = 46/177 (25.99%), Postives = 76/177 (42.94%), Query Frame = 1
BLAST of ClCG05G007350 vs. NCBI nr
Match: gi|659077208|ref|XP_008439084.1| (PREDICTED: cell number regulator 6 [Cucumis melo]) HSP 1 Score: 519.2 bits (1336), Expect = 3.7e-144 Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 1
BLAST of ClCG05G007350 vs. NCBI nr
Match: gi|449460826|ref|XP_004148145.1| (PREDICTED: cell number regulator 6 [Cucumis sativus]) HSP 1 Score: 510.4 bits (1313), Expect = 1.7e-141 Identity = 231/239 (96.65%), Postives = 236/239 (98.74%), Query Frame = 1
BLAST of ClCG05G007350 vs. NCBI nr
Match: gi|697186532|ref|XP_009602303.1| (PREDICTED: cell number regulator 6-like [Nicotiana tomentosiformis]) HSP 1 Score: 429.9 bits (1104), Expect = 3.0e-117 Identity = 194/239 (81.17%), Postives = 209/239 (87.45%), Query Frame = 1
BLAST of ClCG05G007350 vs. NCBI nr
Match: gi|698512177|ref|XP_009801117.1| (PREDICTED: cell number regulator 6-like [Nicotiana sylvestris]) HSP 1 Score: 427.6 bits (1098), Expect = 1.5e-116 Identity = 193/239 (80.75%), Postives = 208/239 (87.03%), Query Frame = 1
BLAST of ClCG05G007350 vs. NCBI nr
Match: gi|460378812|ref|XP_004235162.1| (PREDICTED: cell number regulator 6 [Solanum lycopersicum]) HSP 1 Score: 422.5 bits (1085), Expect = 4.7e-115 Identity = 193/239 (80.75%), Postives = 205/239 (85.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |