ClCG05G005480 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGAAAATTAGGAAGAACAATTTGAAGCATTTTTTTAATGGTTGTCCATTCATTTGACGTCAGGGCTGAGGCAAACTGATTTTGGGTGTTCGAGGATCTTCAAATCCAAACGCCATTGTCTTCTTTCTAAGCCTTTCTCTAGTTTCTCCTACTGAAATCAGAGTAAAAGGATCGTCACTGAATTCAGAGTTGAACAACAAAAATGTCAGGCCCTCAATGCTGTTCAAACCCACCAACTCTAAACCCCAGCAGCGGCGCCGGCCATCTCGAACAACTCGGCGGCCTCAATACCTACGTCACCGGCTCCCCTCACTCCAAACTCGCCGTCCTCTTTATTACCGATGTCTACGGTACGGTGCCTACCCTTTTCATTCGTATATTTTTGTGTACATATATGTATATGTATATGTATATATTTATATGGTACCTACTGTAGGATAACAGGTATTTGACTTCTGGGGAAAGGGAATTTCCACTTGGGTCTGATTCTGTTCACTGTAGAATTTTAATAGATGTTCTTTTGGAAGTTTAGGAATTGATGAAAATTTCGCCTAGCCCTATGTTTGTTGATTTTCATCTATACTGCTTCATTATGCTCCTCCAAATTGCCCTGCTCTTCCTATTTTCTTAAGCACTGTTCTCTTTGCTAATAGAAATTGTGATATACTTCGATAGTCTCGATACATCCTTCAATACTAAATTGGAGTATTTTTATTGATATTAAGGATTAGGGGATAGCCAACATGAGCACAAATGTCATTGACATATACTTCTCCCTTCTAGGTCGGAGGTTCAATTTCATGGAGAAAAGGACTAAGGGGTGTGTGTGTGAAAGGAGAATTAAGGGTGTGTTGGTGGGTGTGCATGGGCCAGGCGTGTGTGTTATAAAAAAAAAGAAAAAAGAAAAAAGAAGATTGAATGAATTAAACCATTTATTAATTTAGATAAGGAATTTATAGGATTATCTATTCATATTTTATTGATCTGTAAAATTGAGACATCGATACCTCCAACAACATTGTTCTTTTAATTCGTGTTTGCTATTCATTTTTAGTTTGCCTAAACCATTGTGAACCTTTGAATATAAGTATATATGAAGTTCTTCTTTGCTTTCAATGGTATTGGATGCATGTGAAAGTCTAGTGCTCTAAGCTTTTCATGCTGCCGTGCGCTTTGCAGGATATGAAGCTCCACTTTTAAGGTATTTCTTAAACTGGAAAGATTATGCAATTACCACATGGCTTCACGTGATTTTTTACTAAAAGGAGATTGCTTTTGTTCTTGCTGTGATCGGATTGGTTTCATTTAGTCAAGAAGTTGGGATATGAAGAGCATTTTGGTAGAAGAATAAGCTGCAATTTCTAGTGAGCGTACACAAAGAAGTTGCATCTTTTTGGCTTTAAAGGAAAGAAAACTACAGGAAACTTTCGGGAAACTTTGTTTTATTTAGCTCTTCTTGATGTAAATTTTATATCCATTTAACTCGTACGTCTGTACTCAGTACTCAAATATTCCTTTGTCACTTCCTTTGCTTTGGCCTTGACCTTGACCTCTTTTCTTTGGGTGGCAATTTCATAGTCCATGAAATCCTTTTTTATACCATCAAATTAGAAAGAAGTTGAACATTAGTATCTTTTGATGCCTATATATTTGGGTTCTGCTTGGTACTAATTTCAGGCAGCCGCTTTCAATTTGTAGGAAGCTGGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATATGTTCCAGATGATGCTAATAGGCCAATTCGAGATTGGCTTCAAGATCATGGACCTGTTAGTTATTGCTTTTCATTTCACTGCAACATTTTCTTTGTTAATTATTATCCATCTGCTACTGCTGCTAAAGTGTTTTAGTCTTTTGGACAAATGTGGTACTGGAAATTAAATCGATAGGGTTGGTAAGGATTGACTGACTCGTGTGCTTGCTCACACTCGCTCACTCCTTGTCTTATCTAAGTAAACATTTTGTCAGTTTAAAAATGGGGTGGCCTTTGGTCATCATGTCGTTGTATTCTAAAGATCGCCAAAGAAAACCAATCCTTGTACCCATTGAAATGCGAGAGTTCAAATTCATGTTGATTTAATGGTTTAACAGGACAAGGGTTTTGATGATGCGAAACCAGTAGTTGAAGCTCTGAAAAATAAAGGTATCTCAGCGATTGGAGCTGTAGGCATTTGCTGGGGAGGTGAGTATATTCATCTTGTGTTTCTTGTTTCTTATGATCATAATTTGTTGGTTCTATGATTTTTTTTTGGAGTACTTCCTATGGTTGTTACTATTACCTGGATGAAACTTTCTTATTTGTGTTAAAATTATGATGAACTTTTGTACCTCAGCCAAGGTTGTGGTTGACCTTGCAAAGGTGGAGTTGATTCAAGCTGCTGTGTTGCTGCATCCCTCATTTGTTACCATCGATGACATCAAAGGTTAGTATTTTGGTTCCGTTATCTTTGTCCGCTTTGGCCTTTATTTTCTTTTATGTCCTTCTTAATAAGAAACACCTCCACTGCTGAAGATAAGGCTGCTTCAAATGCACCCCAAGTCAGACAAGAAAGAAATGAAACTTCCAACAAACAAAAACATCAGAAGAGCCTCTGAACACGGACCCAAACCATACAAAAACCACATGTGTTTATAAGCTCCCCAATTACGGAATAGATACCCATACCACAGCCAAGCATTCATAGGTGCTTAGTTATAAATCTCACTATGTCAACTCATTCTCAGGTGCTTAGTTTTAATGCACGAATGAGGCTGAAGAAACATGCAGAAGAGTATTCCCAAAAGGAAGTTTCTCCCTAATGCAATGGGCTGAACCAAAAAATCTTATTGTTTTCAGACAATTTTATTTTCCATCATTGAAGAAGGGACAGAGGCAACAACCTGACGAGCAAGATGGATAGGCCCGGCCACTTCAAACCCTTTTCCTTCACATTCATGGAACCAATTTTTTTTCTTACAAAACAAATCATGACGAAAATAGCGTAACTAAGAGGATAATTCTATTTCCCTGCCGTTATGATTGTTACTAAATCTTTCGTTTTGAAACTTTCTGCACTTCAAGCAGGACACGTTCTAAACTATGAGGCTAAGTGTTCCTTCTAGCAATAGCAAATGAAAATCTCAGATTGACTGACCTGTTCTAATTAGTATCAGGGACTATTTCTTTGTGTTTATGGGAACCAACCAGTAAGAAATGAGTGAAAATAATTTAATTAAAGCTAACTGAGTCCAATGTTTACTGATAATTGTAGGGGTCAAAGCTCACATTTCGGTACTAGGAGCGGAGATCGATCAAATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAAATCTTGTCTGCAAAGCCTGAGGTAGAATGAGAGTTGTCTTATTTTCCCTCCTTTTACTTCATCTAGTTGAATTTTTATCATAATATTTTTTGTGAATCTGATCTTGCCTCTCTTAGCAAAAGTGATTTACATTGACAACAAATACAGGTTAAATAGGCTAAGTCTAATTACTTGAATAATGTTACATAAACCATTTCCTTTGGATTTGAATCTTTTGCCACAATCATATCTATGCTCAACGTGGTTTTTCCTTACCTTCATGGCGAATGTTAGTCCAAATTATGCACTTGACTCGTACTCTGACCTTACACTTCCCTATTATCCACATATTCATTCATTCAACTTAAAAAGTAGATGTAAATTTCGGTTTGTTCAATGTCTAGGTCGACTGGTTTGTAAAGATCTTTCCAAAGGTTTCTCATGGGTGGACTGTGAGGTACAATGTGGAAGATGAAGAGGCTGTCAAATCTGCAGATGAAGCCCACGGGGACTTGTTGGCTTGGTTTACTAAGTATCTTAAGTAATTGAATTGGCCATTGTCAATCCCTCTTGTTAGTATCAGTGTTGTAGGCCATTTTACTCTTTAAGCTCAGAATAAGAAGTTTGGAAGAATGTTTGGAAATGCAGCTGCTTTCTAATATCCCAGTGAAAAACATGGGATCAGTAATAATGTTAGCTGATTTGATGATGATGATAGTACAATGAGAACGCATTTTCTTTTTGTGAGCTTGAAACATCTCTTTGATTTTGCAGGGAGAATAATTTCTCATATATATATATACACTTTTTACCTTGAA GCGAAAATTAGGAAGAACAATTTGAAGCATTTTTTTAATGGTTGTCCATTCATTTGACGTCAGGGCTGAGGCAAACTGATTTTGGGTGTTCGAGGATCTTCAAATCCAAACGCCATTGTCTTCTTTCTAAGCCTTTCTCTAGTTTCTCCTACTGAAATCAGAGTAAAAGGATCGTCACTGAATTCAGAGTTGAACAACAAAAATGTCAGGCCCTCAATGCTGTTCAAACCCACCAACTCTAAACCCCAGCAGCGGCGCCGGCCATCTCGAACAACTCGGCGGCCTCAATACCTACGTCACCGGCTCCCCTCACTCCAAACTCGCCGTCCTCTTTATTACCGATGTCTACGGATATGAAGCTCCACTTTTAAGGCAGCCGCTTTCAATTTGTAGGAAGCTGGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATATGTTCCAGATGATGCTAATAGGCCAATTCGAGATTGGCTTCAAGATCATGGACCTGACAAGGGTTTTGATGATGCGAAACCAGTAGTTGAAGCTCTGAAAAATAAAGGTATCTCAGCGATTGGAGCTGTAGGCATTTGCTGGGGAGCCAAGGTTGTGGTTGACCTTGCAAAGGTGGAGTTGATTCAAGCTGCTGTGTTGCTGCATCCCTCATTTGTTACCATCGATGACATCAAAGGGGTCAAAGCTCACATTTCGGTACTAGGAGCGGAGATCGATCAAATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAAATCTTGTCTGCAAAGCCTGAGGTCGACTGGTTTGTAAAGATCTTTCCAAAGGTTTCTCATGGGTGGACTGTGAGGTACAATGTGGAAGATGAAGAGGCTGTCAAATCTGCAGATGAAGCCCACGGGGACTTGTTGGCTTGGTTTACTAAGTATCTTAAGTAATTGAATTGGCCATTGTCAATCCCTCTTGTTAGTATCAGTGTTGTAGGCCATTTTACTCTTTAAGCTCAGAATAAGAAGTTTGGAAGAATGTTTGGAAATGCAGCTGCTTTCTAATATCCCAGTGAAAAACATGGGATCAGTAATAATGTTAGCTGATTTGATGATGATGATAGTACAATGAGAACGCATTTTCTTTTTGTGAGCTTGAAACATCTCTTTGATTTTGCAGGGAGAATAATTTCTCATATATATATATACACTTTTTACCTTGAA ATGTCAGGCCCTCAATGCTGTTCAAACCCACCAACTCTAAACCCCAGCAGCGGCGCCGGCCATCTCGAACAACTCGGCGGCCTCAATACCTACGTCACCGGCTCCCCTCACTCCAAACTCGCCGTCCTCTTTATTACCGATGTCTACGGATATGAAGCTCCACTTTTAAGGCAGCCGCTTTCAATTTGTAGGAAGCTGGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATATGTTCCAGATGATGCTAATAGGCCAATTCGAGATTGGCTTCAAGATCATGGACCTGACAAGGGTTTTGATGATGCGAAACCAGTAGTTGAAGCTCTGAAAAATAAAGGTATCTCAGCGATTGGAGCTGTAGGCATTTGCTGGGGAGCCAAGGTTGTGGTTGACCTTGCAAAGGTGGAGTTGATTCAAGCTGCTGTGTTGCTGCATCCCTCATTTGTTACCATCGATGACATCAAAGGGGTCAAAGCTCACATTTCGGTACTAGGAGCGGAGATCGATCAAATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAAATCTTGTCTGCAAAGCCTGAGGTCGACTGGTTTGTAAAGATCTTTCCAAAGGTTTCTCATGGGTGGACTGTGAGGTACAATGTGGAAGATGAAGAGGCTGTCAAATCTGCAGATGAAGCCCACGGGGACTTGTTGGCTTGGTTTACTAAGTATCTTAAGTAA MSGPQCCSNPPTLNPSSGAGHLEQLGGLNTYVTGSPHSKLAVLFITDVYGYEAPLLRQPLSICRKLADKVAAAGFFVVAPDFFKGDPYVPDDANRPIRDWLQDHGPDKGFDDAKPVVEALKNKGISAIGAVGICWGAKVVVDLAKVELIQAAVLLHPSFVTIDDIKGVKAHISVLGAEIDQMSPPELLKQFEEILSAKPEVDWFVKIFPKVSHGWTVRYNVEDEEAVKSADEAHGDLLAWFTKYLK
BLAST of ClCG05G005480 vs. Swiss-Prot
Match: E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.8e-35 Identity = 90/204 (44.12%), Postives = 120/204 (58.82%), Query Frame = 1
BLAST of ClCG05G005480 vs. Swiss-Prot
Match: AIM2_YEAST (Protein AIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AIM2 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.0e-17 Identity = 77/249 (30.92%), Postives = 112/249 (44.98%), Query Frame = 1
BLAST of ClCG05G005480 vs. Swiss-Prot
Match: YI7F_SCHPO (Uncharacterized AIM2 family protein C977.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.15 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-09 Identity = 61/236 (25.85%), Postives = 99/236 (41.95%), Query Frame = 1
BLAST of ClCG05G005480 vs. Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain VF5) GN=aq_1997 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.9e-06 Identity = 60/215 (27.91%), Postives = 99/215 (46.05%), Query Frame = 1
BLAST of ClCG05G005480 vs. TrEMBL
Match: A0A0A0LAG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150110 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 3.0e-119 Identity = 216/246 (87.80%), Postives = 227/246 (92.28%), Query Frame = 1
BLAST of ClCG05G005480 vs. TrEMBL
Match: A0A067L7L8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02087 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 2.3e-103 Identity = 180/246 (73.17%), Postives = 214/246 (86.99%), Query Frame = 1
BLAST of ClCG05G005480 vs. TrEMBL
Match: A0A059D125_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01156 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.1e-101 Identity = 178/246 (72.36%), Postives = 209/246 (84.96%), Query Frame = 1
BLAST of ClCG05G005480 vs. TrEMBL
Match: A0A059D264_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01156 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 8.1e-101 Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 1
BLAST of ClCG05G005480 vs. TrEMBL
Match: A0A059D1K2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01156 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 8.1e-101 Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 1
BLAST of ClCG05G005480 vs. TAIR10
Match: AT3G23600.1 (AT3G23600.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 357.5 bits (916), Expect = 6.8e-99 Identity = 169/246 (68.70%), Postives = 205/246 (83.33%), Query Frame = 1
BLAST of ClCG05G005480 vs. TAIR10
Match: AT3G23570.1 (AT3G23570.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-87 Identity = 153/246 (62.20%), Postives = 189/246 (76.83%), Query Frame = 1
BLAST of ClCG05G005480 vs. TAIR10
Match: AT1G35420.2 (AT1G35420.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-09 Identity = 50/212 (23.58%), Postives = 91/212 (42.92%), Query Frame = 1
BLAST of ClCG05G005480 vs. NCBI nr
Match: gi|659076528|ref|XP_008438729.1| (PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X1 [Cucumis melo]) HSP 1 Score: 451.4 bits (1160), Expect = 9.8e-124 Identity = 222/246 (90.24%), Postives = 231/246 (93.90%), Query Frame = 1
BLAST of ClCG05G005480 vs. NCBI nr
Match: gi|449432741|ref|XP_004134157.1| (PREDICTED: endo-1,3;1,4-beta-D-glucanase isoform X2 [Cucumis sativus]) HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-119 Identity = 216/246 (87.80%), Postives = 227/246 (92.28%), Query Frame = 1
BLAST of ClCG05G005480 vs. NCBI nr
Match: gi|778678605|ref|XP_011650996.1| (PREDICTED: endo-1,3;1,4-beta-D-glucanase isoform X1 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117 Identity = 216/248 (87.10%), Postives = 227/248 (91.53%), Query Frame = 1
BLAST of ClCG05G005480 vs. NCBI nr
Match: gi|659076526|ref|XP_008438728.1| (PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Cucumis melo]) HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115 Identity = 208/242 (85.95%), Postives = 220/242 (90.91%), Query Frame = 1
BLAST of ClCG05G005480 vs. NCBI nr
Match: gi|802579506|ref|XP_012069506.1| (PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Jatropha curcas]) HSP 1 Score: 383.3 bits (983), Expect = 3.3e-103 Identity = 180/246 (73.17%), Postives = 214/246 (86.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |