ClCG05G003850 (gene) Watermelon (Charleston Gray)

NameClCG05G003850
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 3604551 .. 3606497 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTCAGAGTTTAAGGAAGAAGAAAACAGTTTGAGTGTCGAGGAAGATGATTTTTGGGTATTAAAATCATTTCACCATGTGGAATTCACCTCTATAGCTCTGAAAAGTTTTTAAAAAATATGTTAGTTTGCCATATTAAAAACTTTTTGAGTTAGAAAAAATAATTTTTTGGATCATATTGGGGTTAGAAAGAAAGAGAGGTGGAAAATGGTGGGTTCGTTACCCCGTTGGCGTCGGTGTGTTCATCATCTTCAATGTTGAAACAATTTTGCTATTTATAATTAATAGTCCTAAAAATTCTTTTGCTATCTTTTTCCAATTTTTTTCCAATTGTGCTATTTATTAAAACCAATCTTTAAATTTTGTTATTTTTCTTGTCACCCCTTTAAAAAAAAAAAAATGCATGGGCAAACGTCATCAAACCCATTAAACCAATTTTACGATTCGGACCTATTTCTATTGATCCACCCATTGAAATCAAGATAGCTTACCCCATTTTTCACAAAATTCTATCTCATTATTTTGCAAAATCCTTCTAAAATTTTATTTATTACACTTACGTCATATTTTTAGAAATAGGTTATTTATTTAGTACATTCAAAAAAAAAAAAAAAAATTATGGATTGCCCTTTGTTTAATTTAATTTGTCATTATTGTTCTTATTAGTGTTAAATTAGTGCGAAGAGCAATACACTCTACTACCTACTTTTATTACATTAAGTTAATTAAACATCAAATTTTAAAATTTTGAAATTTAAAAAAATTTTGTAACTTCACATCCTACCACTATAAATAATAGCTTTCTTTATCACTTTTATTCATCAACTCCTAAAACTTCATTGTTTCTTTGTTTTCGCTCTCACAATGCATTGTTCTAAAAGTTACCTAAATTTTCAAGGCATCTTGAAGATAATAATACATTCATTTGCAAACGATGATGCATATGTCATATCTATATCATAAATAATATTTCAATAAAATATTCAAAAAAATAAAAAATGTAAAAATAATGCAATGCACGTAGTAGAATACTAGTAAAATAAAAAAATAAAAAACCAAATTTGATGATATTGGAAATTGCATTTAAAAAATAAAATAAAATATAAAATTGATTTTAAATATGAGAAAAATGATGTTAGGCTGTGGAATGTGCTAAATTTGTAAATATGAAGTTAAGGAGATATATAAATCAGAGTAAGGAAAAAAAAAAGTGATATAAATACTGAGGAAGAAGAGTAAAACCCTAAACGCCGGTTGAGTTGAGAATTGGGAATTGGGAGGAAAGATATGATGAAAATGGTGGGTGCGGTACTCTGTTGGCGTTGGCTGTGTTCATGACCTTCATCAGGTGGGTTGATCGGGAATCGGAATCTCCTCTGCCGCGCATTCTCAGCAGCCACCCCTGCACCTCAAGAACCTACCAGACTCGACAACATCAATCTTGAAAGCAAGCGGTACGAGGTATATCTATCTATATATATATATATATATATTTTGTTCTGATTTCCTTGTGATTATTGGCTTAGTCTGTGTTGTAAGGGCATTAATATGTAGATAGTTAACTCTCTGTTGAATTTGGGTATTATATATATATGTTTTTGTAGTGGGGTTGGGAATCAATTGCAGATGTACAAGGTTTGGAGAATTGGGAGACGTTCAAGTCATGGATGTTGGAGCACAATAAGAGGTAGGAGAGCGAGGAAGAGATGTTGTATAGGTTTGGGACATATTATTCAACCATACTTTAAAGTCGATTGAGAAGTGGAACAAGGAGGAGGATTCAGGATGTACCTCTGGGTTGAATCTCTTCACTTCTTTTCCTCTCATCTCTTTTTGTCTCCCATTTAATCCAATCATCCTTCCTACAAATGACTTTATGATTAGCTTTATTTTGAAACAATGTTGGGTTTTGTGAAGATTTGCAATTAATGGTTAATATTAAAA

mRNA sequence

ATGATCTCAGAGTTTAAGGAAGAAGAAAACAGTTTGAGTGTCGAGGAAGATGATTTTTGGTTGAGAATTGGGAATTGGGAGGAAAGATATGATGAAAATGGTGGGTGCGGTGGGTTGATCGGGAATCGGAATCTCCTCTGCCGCGCATTCTCAGCAGCCACCCCTGCACCTCAAGAACCTACCAGACTCGACAACATCAATCTTGAAAGCAAGCGGTACGAGTGGGGTTGGGAATCAATTGCAGATGTACAAGGTTTGGAGAATTGGGAGACGTTCAAGTCATGGATGTTGGAGCACAATAAGAGGTAGGAGAGCGAGGAAGAGATGTTGTATAGGTTTGGGACATATTATTCAACCATACTTTAAAGTCGATTGAGAAGTGGAACAAGGAGGAGGATTCAGGATGTACCTCTGGGTTGAATCTCTTCACTTCTTTTCCTCTCATCTCTTTTTGTCTCCCATTTAATCCAATCATCCTTCCTACAAATGACTTTATGATTAGCTTTATTTTGAAACAATGTTGGGTTTTGTGAAGATTTGCAATTAATGGTTAATATTAAAA

Coding sequence (CDS)

ATGATCTCAGAGTTTAAGGAAGAAGAAAACAGTTTGAGTGTCGAGGAAGATGATTTTTGGTTGAGAATTGGGAATTGGGAGGAAAGATATGATGAAAATGGTGGGTGCGGTGGGTTGATCGGGAATCGGAATCTCCTCTGCCGCGCATTCTCAGCAGCCACCCCTGCACCTCAAGAACCTACCAGACTCGACAACATCAATCTTGAAAGCAAGCGGTACGAGTGGGGTTGGGAATCAATTGCAGATGTACAAGGTTTGGAGAATTGGGAGACGTTCAAGTCATGGATGTTGGAGCACAATAAGAGGTAG

Protein sequence

MISEFKEEENSLSVEEDDFWLRIGNWEERYDENGGCGGLIGNRNLLCRAFSAATPAPQEPTRLDNINLESKRYEWGWESIADVQGLENWETFKSWMLEHNKR
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G003850.1ClCG05G003850.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G003850Cla97C05G084500Watermelon (97103) v2wcgwmbB229
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G003850Silver-seed gourdcarwcgB0220
ClCG05G003850Silver-seed gourdcarwcgB0226
ClCG05G003850Silver-seed gourdcarwcgB0757
ClCG05G003850Silver-seed gourdcarwcgB0935
ClCG05G003850Silver-seed gourdcarwcgB1045
ClCG05G003850Cucumber (Chinese Long) v3cucwcgB148
ClCG05G003850Cucumber (Chinese Long) v3cucwcgB225
ClCG05G003850Cucumber (Chinese Long) v3cucwcgB246
ClCG05G003850Watermelon (97103) v2wcgwmbB237
ClCG05G003850Watermelon (97103) v2wcgwmbB242
ClCG05G003850Wax gourdwcgwgoB412
ClCG05G003850Wax gourdwcgwgoB447
ClCG05G003850Watermelon (Charleston Gray)wcgwcgB160
ClCG05G003850Watermelon (Charleston Gray)wcgwcgB164
ClCG05G003850Cucumber (Gy14) v1cgywcgB238
ClCG05G003850Cucumber (Gy14) v1cgywcgB451
ClCG05G003850Cucumber (Gy14) v1cgywcgB653
ClCG05G003850Cucurbita maxima (Rimu)cmawcgB233
ClCG05G003850Cucurbita maxima (Rimu)cmawcgB319
ClCG05G003850Cucurbita maxima (Rimu)cmawcgB464
ClCG05G003850Cucurbita maxima (Rimu)cmawcgB737
ClCG05G003850Cucurbita maxima (Rimu)cmawcgB795
ClCG05G003850Cucurbita moschata (Rifu)cmowcgB219
ClCG05G003850Cucurbita moschata (Rifu)cmowcgB315
ClCG05G003850Cucurbita moschata (Rifu)cmowcgB463
ClCG05G003850Cucurbita moschata (Rifu)cmowcgB743
ClCG05G003850Cucurbita moschata (Rifu)cmowcgB792
ClCG05G003850Wild cucumber (PI 183967)cpiwcgB141
ClCG05G003850Wild cucumber (PI 183967)cpiwcgB226
ClCG05G003850Wild cucumber (PI 183967)cpiwcgB247
ClCG05G003850Cucumber (Chinese Long) v2cuwcgB136
ClCG05G003850Cucumber (Chinese Long) v2cuwcgB222
ClCG05G003850Cucumber (Chinese Long) v2cuwcgB240
ClCG05G003850Melon (DHL92) v3.5.1mewcgB335
ClCG05G003850Melon (DHL92) v3.5.1mewcgB385
ClCG05G003850Melon (DHL92) v3.5.1mewcgB427
ClCG05G003850Watermelon (97103) v1wcgwmB286
ClCG05G003850Watermelon (97103) v1wcgwmB311
ClCG05G003850Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G003850Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G003850Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G003850Cucurbita pepo (Zucchini)cpewcgB679
ClCG05G003850Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G003850Bottle gourd (USVL1VR-Ls)lsiwcgB016
ClCG05G003850Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G003850Bottle gourd (USVL1VR-Ls)lsiwcgB337
ClCG05G003850Cucumber (Gy14) v2cgybwcgB129
ClCG05G003850Cucumber (Gy14) v2cgybwcgB203
ClCG05G003850Cucumber (Gy14) v2cgybwcgB222
ClCG05G003850Melon (DHL92) v3.6.1medwcgB329
ClCG05G003850Melon (DHL92) v3.6.1medwcgB376
ClCG05G003850Melon (DHL92) v3.6.1medwcgB416