ClCG05G003400 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAGCCCACAACTCGGCCCGACGCCACGCACGTCGTTCATGTGTTGAAATCGGCTCGGCGATTTCCGATTCATCTCGTTTTTCGACGACCACAGGGTTCACAGATTCTCTCCAGGATGGAATTCTGCAATTCCTTCATCTTCTTCACTCTGTTAATCATCCTCCCTCTCGCTAGGGTTTGTTCTATCTGCTCAATTTCCTTGATTCTTTCTAATTCTGAACTTTTTTTTCGCGGATTAATACTTTGGAGCATCCCCGGGATCTGATAATTCTTCAATTTGACGTGTTTTCATTTTTCTGGTTTGATCCAGTGCGAGGTTACTGGCTCGGTGCTCTTCGTTGATAGCTCGTCGCATCAATATCTTCGATCTCATTCGCCCGATGATGGCTTTGAGGTAATTTGGTTTCTTCTGTATTTTCTTTGCCCTGGAATGATCGGTTCGGTTGGTTAGACTTGAGTTGAGTTTCGTGCTTAAATTGAGGAAATCGAGTTGAGTTTTTTTTGCCCTAGCAGTGAATAGACTTGAGTTGCGTGCTTGAATTGTTTTGAATTCTTTTTCCATGTCCGTGTTGGTGTCGCGAATTCAGGCGGATTGAGGAAATTGAATCTGGAACTACTTATTTTTGAACTGAGTCGAGATGTTCTTTCTTAAATTTTAACATTGTATCTGTTTCACATCGTAGTATACGGATGATTGCATATAGGAATTCACTAACTCATCTATCTAATACGTGTTATTAGCTATTATCTGTTTGTAATTGATGTGCAATTGTGTACGGATTAAGAAAACCTATGCCTCACATTTCGTGACGTTGAAGTTTAAAAGCACTTTTGAGGGTTTTTTTTTCTTTTTCCCGCCGATGGTCTGACAACGTTGTGAACCCTTCTAGTTTCAACCAATCCGACCATGGATGAACAATTTTAAATGTTTTGTCATGTTGTAAAACCATATTATGCCCATTCTTACCCTATTTTCAGTGGAAAATATCAATGTGACAGTATGTAGAATAGAACTTTGCTCTGTTATTATTGTTGGATAAAATATTAGTTAATCTTATCATGTTATGCTTGCATATTTGATTTCCACAGGTTAGTTCAATGTCACTACCAGAAGTTGGTTCTGCTGTGTCAGTCTTGCTTGGTTTTGCGCCTCCTTCAACGCTTTCAGCTTCTGGTTCATCTAAGGTTCTTCATTGTTTGATAAGTTCCGCAGAAGTTTTCCTTGTGCATTTTACATATGCATGCGGTTGTATTGTTTTGATCATGTTATTAATGCCTTTTGCAGCTGAATGGGATTTTGATGCCAAATCCGCTTGATAGGCCTCGTTCAGTCTTTATGCTTCAAATTAAAGGAGAATATGGTCTCTGCAGTTTTTTTGAAAATGAAATCGAAAATTTTATCTTGTATGCATGGTTTTTAAAGACGTTAACCCTTTTCAATTCTGATACTTGTAGACCCTGAAATTGTAAGCCTAGAAAGTGGCATGTCCAGCAATGTTCTTACGAGCAAGGTTCATGTAGGTTCTGAGAGTGCTGACATCCAACTTCCTGGTATTTGTTCCTTCAAAAATCATTATTGGTATGCTTTTTTCCCCCAAATATTTTCAGCTGCCCTTTGGCCTTTCTAATGCTCGTTATTAGCAGGTGAAGATGAAGTGTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTATACTGATGAAGATATTAAAGAGTTTGTAAGTTGTGAATCAAGATTTTTATTGTATAATTAAAAGCCTATATTTTTATTTTTTACATATTTCCTTTTTAACAAGTTTTAATTTTGTTTGAATATCTGACTAGGCATCTTTAATAGGTGGATCATATGTTGCTGATGCATCAAAAACTTTAAATGGAGAGTTTACTGTGCGCCTGACTGATGATGTTAAGATCAATCTTCATCTGTCTAAGGTTTTACTTGATCTGTTTAGAATGTTATCTGGTTATATTCTATAGACATTTCTATTAATGTGTTCATTGGCGCATTATCTCATTTGCAGACGGGGGACAGAGAATTTATAGGTAGTCTTTTGTGTCTCTTTCACAATATTAAGAGGGCTATTCACATTCATGAGGATTTGTCACAAAATGTTCCAAGTCCATCTGAGCTCATCACTGGCTCTTTTGATAGCATCAAGGTACGCTGTTTTCCTTGATTTTGATGTTTCTTTTTTTGGATGATGTTATTCAACTTCTGTTCCTATCATGCAATTTTTTGTTCAACTTTGTTTCAGTTGCAACAGCTAAACATTGGTAGAGACATTGATGTGGTTATTAGTGCTATACTTTATTGTGTTACACAACTATAGTACTTATGGGTCATAGAGCATGGTGTGCCCATTGGGAGCCTGAAACCTTGATTCTGCTGCCTTCTTGAAAAAACCGCTTTTGCAATAAATTAACATATATTGAATGTGATTGTGTTTTGATTTTCCCCAATACTCAATAGCGTTTTCAATTTTTTCTTTGTTTTCTTTATAAACAATGCGTACATTTATTCTAATCAACATTTCACCAACGGTTTGGCAGGCATTCCAGGATGAAATTGATTCTGAGGGAGATGTTGATCGTAGATCGAGACTATTTGTCGTTGCTTTGTCCAAGATATTCCACTTACTCCAAAAAGCATATGATGGTAAGTGGTCGGTTGCTTTGGTTTGAGGAGCATGTCAATTGTTCATTATGTAGCTATAGTCTCTTTCAGCTGCCTATTTCTTGTCAAGAAGTGAAATTTTAGTAACCTGTTATATTTCATATTGCCTTCGATGTTATTCTTGCTCAACGATGACTTGACAAATATGCATATTAATGTCAATGGCACCCCTTTTTTGATTTTTGAACAAAGAATTTGGGTTTTTAAGATGCTAGTTTACTTAGATACCTGTAATTTAACTTGTAGGTCAAATTGTTGGAGTTGTTTTCTTTTCTGGATCATCATCACCAAAGGCAGAAAAAGGATTAAATGTGATGTTTAACCCTCGGTTGACTCCACGTTGGTTGGTCGAAGAAGTCAAAGTTAACACAACTATTCAAGAAGTGATTTTGGTTAGGACAACCCTTGCCTGGCTCACAGGAATCATCCTTTTGATTGCTACTCTTATGGGGGTAAATTTTGCACCTCTACTCCATTTTGCTCCATCTAATTTAATCATGTTATTTTCTGCTTTTTCTCTACAATGGGTTTTATTTTTTTGTGACCTTAGACATATGACTGACTAGTGCCTTTGAACTCTCAACTAAATAGCAGCAGTTCATTTTAATTTTTGGTGCTTCTGGAGAGTAATTCTCATCAATTTTTAGGAAACCGGTAGACTCAATCTAAGGAAGTAATGTAATAGATATTTAAGCCTAAGGACTTCATTTTTGGATAAGAAACAATTTCATTGATGGTATGAAATTACAAAAGAAAGGGGAAAGAGCCCAAGGGAGAGATTACAAAAGACCTTTCTAGTTTCAAAGTAGACTAGACTAGTATTGCTATAGCCTTGAAATAAGGGAGAGCATTAACACCAAGTCACAATCTTGTTAACTATAGCATCGAAATTAAGCAAAGGACTTCAGGAAACAAACTTTTCTTATGCGTAACTGAACAATTACATTTTCATAATCAAGCTCTCTTTTAGAATTGACTTTTGACATCCATCTTTTTTTGGTTGTGTACTCCGAATCTTATTTTGGCTAACTTTCATGTAAAACTGGACTAAAATGTGACAAACATATATATTGATGGTTGGTACATTTTGGGTGAATTCGATTTTTGTTGACCTTGTGTCCTTTTGCCGCAGTCGTGCTGCCTTCTAAGGATGCCTCTCACGAGGGACACCCTTCTCTACTCTAATGTGAAACTGGACTAAGATAGAATTAAACCGCCAACTGCATAGATGATGCCCGAGATGATCTATGTCTGCCATTGAAGCATTGAGGGCATGAGATTTGTGTAAGTGCCCTTTCAACAACGTTCTTATCTACATTTTGGTGTAGAAAACTTTGAAATTATTAAAGGTAGCAATGGTATGATGTGCTTCCTACAAGATAATGATGGCTATATAATTGGATCGACAACGAGATTTGGGTTGTATAATAAAGTTATTTTTGAAATGAGATTCGTTTATGTATATTATCATCAATGTCACAACTCAGAGGTCGAGACTCTTCTCATCGGTGACGTGGAAGACTGTGAGAGGTGGCAATGCATTGATTCATCTTTGTTGTACTTTATTTTTGGTGAACATTGAGTTTTTCCAAGGTCCAAAATAAATTCCATTATTAGAATCTTTAATCTCTTTGCATTCTATGTTAAGCTTCGTTATTTT CAAAAGCCCACAACTCGGCCCGACGCCACGCACGTCGTTCATGTGTTGAAATCGGCTCGGCGATTTCCGATTCATCTCGTTTTTCGACGACCACAGGGTTCACAGATTCTCTCCAGGATGGAATTCTGCAATTCCTTCATCTTCTTCACTCTGTTAATCATCCTCCCTCTCGCTAGGTGCGAGGTTACTGGCTCGGTGCTCTTCGTTGATAGCTCGTCGCATCAATATCTTCGATCTCATTCGCCCGATGATGGCTTTGAGGTTAGTTCAATGTCACTACCAGAAGTTGGTTCTGCTGTGTCAGTCTTGCTTGGTTTTGCGCCTCCTTCAACGCTTTCAGCTTCTGGTTCATCTAAGCTGAATGGGATTTTGATGCCAAATCCGCTTGATAGGCCTCGTTCAGTCTTTATGCTTCAAATTAAAGGAGAATATGACCCTGAAATTGTAAGCCTAGAAAGTGGCATGTCCAGCAATGTTCTTACGAGCAAGGTTCATGTAGGTTCTGAGAGTGCTGACATCCAACTTCCTGGTGAAGATGAAGTGTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTATACTGATGAAGATATTAAAGAGTTTGCATCTTTAATAGGTGGATCATATGTTGCTGATGCATCAAAAACTTTAAATGGAGAGTTTACTGTGCGCCTGACTGATGATGTTAAGATCAATCTTCATCTGTCTAAGACGGGGGACAGAGAATTTATAGGTAGTCTTTTGTGTCTCTTTCACAATATTAAGAGGGCTATTCACATTCATGAGGATTTGTCACAAAATGTTCCAAGTCCATCTGAGCTCATCACTGGCTCTTTTGATAGCATCAAGGCATTCCAGGATGAAATTGATTCTGAGGGAGATGTTGATCGTAGATCGAGACTATTTGTCGTTGCTTTGTCCAAGATATTCCACTTACTCCAAAAAGCATATGATGGTCAAATTGTTGGAGTTGTTTTCTTTTCTGGATCATCATCACCAAAGGCAGAAAAAGGATTAAATGTGATGTTTAACCCTCGGTTGACTCCACGTTGGTTGGTCGAAGAAGTCAAAGTTAACACAACTATTCAAGAAGTGATTTTGGTTAGGACAACCCTTGCCTGGCTCACAGGAATCATCCTTTTGATTGCTACTCTTATGGGGTCGTGCTGCCTTCTAAGGATGCCTCTCACGAGGGACACCCTTCTCTACTCTAATGTGAAACTGGACTAAGATAGAATTAAACCGCCAACTGCATAGATGATGCCCGAGATGATCTATGTCTGCCATTGAAGCATTGAGGGCATGAGATTTGTGTAAGTGCCCTTTCAACAACGTTCTTATCTACATTTTGGTGTAGAAAACTTTGAAATTATTAAAGGTAGCAATGGTATGATGTGCTTCCTACAAGATAATGATGGCTATATAATTGGATCGACAACGAGATTTGGGTTGTATAATAAAGTTATTTTTGAAATGAGATTCGTTTATGTATATTATCATCAATGTCACAACTCAGAGGTCGAGACTCTTCTCATCGGTGACGTGGAAGACTGTGAGAGGTGGCAATGCATTGATTCATCTTTGTTGTACTTTATTTTTGGTGAACATTGAGTTTTTCCAAGGTCCAAAATAAATTCCATTATTAGAATCTTTAATCTCTTTGCATTCTATGTTAAGCTTCGTTATTTT ATGGAATTCTGCAATTCCTTCATCTTCTTCACTCTGTTAATCATCCTCCCTCTCGCTAGGTGCGAGGTTACTGGCTCGGTGCTCTTCGTTGATAGCTCGTCGCATCAATATCTTCGATCTCATTCGCCCGATGATGGCTTTGAGGTTAGTTCAATGTCACTACCAGAAGTTGGTTCTGCTGTGTCAGTCTTGCTTGGTTTTGCGCCTCCTTCAACGCTTTCAGCTTCTGGTTCATCTAAGCTGAATGGGATTTTGATGCCAAATCCGCTTGATAGGCCTCGTTCAGTCTTTATGCTTCAAATTAAAGGAGAATATGACCCTGAAATTGTAAGCCTAGAAAGTGGCATGTCCAGCAATGTTCTTACGAGCAAGGTTCATGTAGGTTCTGAGAGTGCTGACATCCAACTTCCTGGTGAAGATGAAGTGTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTATACTGATGAAGATATTAAAGAGTTTGCATCTTTAATAGGTGGATCATATGTTGCTGATGCATCAAAAACTTTAAATGGAGAGTTTACTGTGCGCCTGACTGATGATGTTAAGATCAATCTTCATCTGTCTAAGACGGGGGACAGAGAATTTATAGGTAGTCTTTTGTGTCTCTTTCACAATATTAAGAGGGCTATTCACATTCATGAGGATTTGTCACAAAATGTTCCAAGTCCATCTGAGCTCATCACTGGCTCTTTTGATAGCATCAAGGCATTCCAGGATGAAATTGATTCTGAGGGAGATGTTGATCGTAGATCGAGACTATTTGTCGTTGCTTTGTCCAAGATATTCCACTTACTCCAAAAAGCATATGATGGTCAAATTGTTGGAGTTGTTTTCTTTTCTGGATCATCATCACCAAAGGCAGAAAAAGGATTAAATGTGATGTTTAACCCTCGGTTGACTCCACGTTGGTTGGTCGAAGAAGTCAAAGTTAACACAACTATTCAAGAAGTGATTTTGGTTAGGACAACCCTTGCCTGGCTCACAGGAATCATCCTTTTGATTGCTACTCTTATGGGGTCGTGCTGCCTTCTAAGGATGCCTCTCACGAGGGACACCCTTCTCTACTCTAATGTGAAACTGGACTAA MEFCNSFIFFTLLIILPLARCEVTGSVLFVDSSSHQYLRSHSPDDGFEVSSMSLPEVGSAVSVLLGFAPPSTLSASGSSKLNGILMPNPLDRPRSVFMLQIKGEYDPEIVSLESGMSSNVLTSKVHVGSESADIQLPGEDEVSVVPLNEPLSDYTDEDIKEFASLIGGSYVADASKTLNGEFTVRLTDDVKINLHLSKTGDREFIGSLLCLFHNIKRAIHIHEDLSQNVPSPSELITGSFDSIKAFQDEIDSEGDVDRRSRLFVVALSKIFHLLQKAYDGQIVGVVFFSGSSSPKAEKGLNVMFNPRLTPRWLVEEVKVNTTIQEVILVRTTLAWLTGIILLIATLMGSCCLLRMPLTRDTLLYSNVKLD
BLAST of ClCG05G003400 vs. TrEMBL
Match: A0A0A0L9G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131990 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 3.1e-181 Identity = 330/370 (89.19%), Postives = 343/370 (92.70%), Query Frame = 1
BLAST of ClCG05G003400 vs. TrEMBL
Match: A0A061EKE4_THECC (Type 1 membrane protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020350 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 2.1e-100 Identity = 194/364 (53.30%), Postives = 262/364 (71.98%), Query Frame = 1
BLAST of ClCG05G003400 vs. TrEMBL
Match: A0A0D2NWM5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G221300 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.3e-99 Identity = 193/371 (52.02%), Postives = 258/371 (69.54%), Query Frame = 1
BLAST of ClCG05G003400 vs. TrEMBL
Match: A0A0B0PYL9_GOSAR (Phosphoglycerate kinase OS=Gossypium arboreum GN=F383_05411 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 2.2e-97 Identity = 191/371 (51.48%), Postives = 255/371 (68.73%), Query Frame = 1
BLAST of ClCG05G003400 vs. TrEMBL
Match: A0A151SB14_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_026092 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.4e-96 Identity = 194/373 (52.01%), Postives = 260/373 (69.71%), Query Frame = 1
BLAST of ClCG05G003400 vs. TAIR10
Match: AT3G24160.1 (AT3G24160.1 putative type 1 membrane protein) HSP 1 Score: 266.2 bits (679), Expect = 3.1e-71 Identity = 161/367 (43.87%), Postives = 226/367 (61.58%), Query Frame = 1
BLAST of ClCG05G003400 vs. NCBI nr
Match: gi|659075862|ref|XP_008438371.1| (PREDICTED: uncharacterized protein LOC103483489 [Cucumis melo]) HSP 1 Score: 647.1 bits (1668), Expect = 1.8e-182 Identity = 331/370 (89.46%), Postives = 347/370 (93.78%), Query Frame = 1
BLAST of ClCG05G003400 vs. NCBI nr
Match: gi|449432430|ref|XP_004134002.1| (PREDICTED: uncharacterized protein LOC101215254 [Cucumis sativus]) HSP 1 Score: 642.5 bits (1656), Expect = 4.5e-181 Identity = 330/370 (89.19%), Postives = 343/370 (92.70%), Query Frame = 1
BLAST of ClCG05G003400 vs. NCBI nr
Match: gi|700201613|gb|KGN56746.1| (hypothetical protein Csa_3G131990 [Cucumis sativus]) HSP 1 Score: 642.5 bits (1656), Expect = 4.5e-181 Identity = 330/370 (89.19%), Postives = 343/370 (92.70%), Query Frame = 1
BLAST of ClCG05G003400 vs. NCBI nr
Match: gi|590656884|ref|XP_007034400.1| (Type 1 membrane protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 374.0 bits (959), Expect = 3.0e-100 Identity = 194/364 (53.30%), Postives = 262/364 (71.98%), Query Frame = 1
BLAST of ClCG05G003400 vs. NCBI nr
Match: gi|823177777|ref|XP_012486901.1| (PREDICTED: uncharacterized protein LOC105800361 [Gossypium raimondii]) HSP 1 Score: 370.5 bits (950), Expect = 3.3e-99 Identity = 193/371 (52.02%), Postives = 258/371 (69.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |