ClCG05G000370 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTACTCAAACTTGCTTCCATGGATTCCACTTCCCCGGACTTCTATCAAAACGTTGTCGTTTTACGTCACGCCGATCGTCTCGACTTCTCCGACCATTCATGGGCGGCCATGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAACAGGGCATTCTCCGGGCCTTCAATACGGGTCGGGTCATTACGAACGATATCGGATCGCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCGGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCTCCCCCTCCCAACTCAAGGTTAGAACTCCACTCCGGCAGAATTTTTTTTCTCTCCCTCCATTACTGGGTACTAGTTTGAAGAGACATCCAATTAAAATTCTCTCTCATGGCCCAGTTTAATATAGGAAGTATATATAGATTTGTAGAGGTGGTGGTAAATGAGAGGTTGAAATGTTAGGGGTGTTTGGGGATGGGTTGAGTTATTAAATATGTGGAGTTGTTTAATTTAGAGAGTTAATTAGATTGTGGAGTTAAATAATCTGTATTTGGTGGATAGAGTTGTTTAAAAATTTGTGTTTGGTGTGCAGAATTTGATATCAAGTATTTATATACTTTGTAATGTTCAATTCCACTCAAATACGAATGAACCAACTTAGTAGCTGTTTAGAGTGTTTGGTTAATTATTATAGTTTGTGAGTTATAATAGTCTATATTTAAGGTGCAAAGCATTTTAGTATAAGTTATAATAGTATGTGTTCGGGGTGCAAATTATTTTAGTTTGGATTACAAATAAGGAAAGGGAATGGTTACAAAATATTAAACACAGTAGACAATGAGAGTTTTCAAATAGTTTTACTATAGCTAAATGTGAGTTATGACAATTAGGAACTCTTGCTTATTATAACGTATGACAATTAGGAACTCTTGCTATTATAACGAGAGATCCTAGCATGGAGTATATTATAGTAGTTCCAAACGCCTCCTTAAAATTATTAATTTTAAAAGTTTCAAAATTGAAATAGATATTTAAAAGTTTAGCTATAAAGTGAAGCAAACTTAAAAGTTTAAGAACAACCTAGTCATTTAATCCAATGCTTGATCCGATGAATTTGGTCATTTCTATGTGTGGGCTTGACATGTTTTCAAAAGTAAATATGGAGGACTTTATATAGTAGTAGTAAAAAGAAAATAGAATTTGACTATTGGGTTAAATTTTAAGCCGTACTTTTAAATAATTAAAAACACTTGGTTGATCAGTGTTTTATTAGAACTGAAATATTGCACCTACGAAATTAGGTTGGAATGTAAGATTTTACTCCACAGGTGTCTATAGAATATGGGTTATGTGAGAAGCTAAATCACAAAGCAATCCCAGCTGAAGTGGCTCCAATGGATTGGAATTCGGGTTTCAATATCACAGACCTTGAATCAATATTGCCTACCGGTTCTACAGACCATTCTGTGAAACCTATATATGAAGAGGTACAAACAAAATTAGGTAGAGGTCGTTTCTATTTTCTGCTTCTTGTTCTACTTTTAAATCTTATCGTTTCTTGTTTCAATATCTCATTTCAGATGCCACAATTTTGAGAGGTCCCTACGACTATACGGTCGAGATTTCAACAGGTTTTCAAGACTCTGGCTGATAAGTACCATTCCCAGAACATCATGCTTATCACTCATGGTGAGCCATAGATTAGTGTAGTAGGCAAATCGTGTTGCTAGTTTCTTTTCCTCTGTTGTTTAAAATATGGGCGCTTGTTTTTAGGCATTGGAGTTGGAGTCATTGTTTCTACTGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGGGGGTTCATTTGTTGCTGGAAACTTTGAGTTGCGTTCGCTTGATGACACTGCTGGTATCAAATTTTCCAGATTAGTTCCAACCTAGCCGAGTCAACGGACGCTCTAGTTTGTGAGTTTTAATAGTTTGTATTTGGGGTGTAGACTATTTTAGCATGTGTTACAAATAAGTAGAGGATGATTACAAAATAGTAAACATTGTGGACAATGTAAGTTTTCAAATAGTTTAATAGCTCACTCCATCCAAGGCAAGTTGGGAGCCCAAACACCTTCTCGGTGGTTATAACTAGTGAAATACAACTTAATCTTGTATTTGATTATTTACTAGCTCAAGTCCTGCAAGAACTTTGTTTCTGTACATGCAGCAAAGACCATAGCAAGAAGTGTGCATGTCAGTATGTGATGAAAAACTGTATATCAGAACTCAG GTACTCAAACTTGCTTCCATGGATTCCACTTCCCCGGACTTCTATCAAAACGTTGTCGTTTTACGTCACGCCGATCGTCTCGACTTCTCCGACCATTCATGGGCGGCCATGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAACAGGGCATTCTCCGGGCCTTCAATACGGGTCGGGTCATTACGAACGATATCGGATCGCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCGGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCTCCCCCTCCCAACTCAAGGTGTCTATAGAATATGGGTTATGTGAGAAGCTAAATCACAAAGCAATCCCAGCTGAAGTGGCTCCAATGGATTGGAATTCGGGTTTCAATATCACAGACCTTGAATCAATATTGCCTACCGGTTCTACAGACCATTCTGTGAAACCTATATATGAAGAGGTCCCTACGACTATACGGTCGAGATTTCAACAGGTTTTCAAGACTCTGGCTGATAAGTACCATTCCCAGAACATCATGCTTATCACTCATGGCATTGGAGTTGGAGTCATTGTTTCTACTGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGGGGGTTCATTTGTTGCTGGAAACTTTGAGTTGCGTTCGCTTGATGACACTGCTGGTATCAAATTTTCCAGATTAGTTCCAACCTAGCCGAGTCAACGGACGCTCTAGTTTGTGAGTTTTAATAGTTTGTATTTGGGGTGTAGACTATTTTAGCATGTGTTACAAATAAGTAGAGGATGATTACAAAATAGTAAACATTGTGGACAATGTAAGTTTTCAAATAGTTTAATAGCTCACTCCATCCAAGGCAAGTTGGGAGCCCAAACACCTTCTCGGTGGTTATAACTAGTGAAATACAACTTAATCTTGTATTTGATTATTTACTAGCTCAAGTCCTGCAAGAACTTTGTTTCTGTACATGCAGCAAAGACCATAGCAAGAAGTGTGCATGTCAGTATGTGATGAAAAACTGTATATCAGAACTCAG GTACTCAAACTTGCTTCCATGGATTCCACTTCCCCGGACTTCTATCAAAACGTTGTCGTTTTACGTCACGCCGATCGTCTCGACTTCTCCGACCATTCATGGGCGGCCATGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAACAGGGCATTCTCCGGGCCTTCAATACGGGTCGGGTCATTACGAACGATATCGGATCGCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCGGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCTCCCCCTCCCAACTCAAGGTGTCTATAGAATATGGGTTATGTGAGAAGCTAAATCACAAAGCAATCCCAGCTGAAGTGGCTCCAATGGATTGGAATTCGGGTTTCAATATCACAGACCTTGAATCAATATTGCCTACCGGTTCTACAGACCATTCTGTGAAACCTATATATGAAGAGGTCCCTACGACTATACGGTCGAGATTTCAACAGGTTTTCAAGACTCTGGCTGATAAGTACCATTCCCAGAACATCATGCTTATCACTCATGGCATTGGAGTTGGAGTCATTGTTTCTACTGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGGGGGTTCATTTGTTGCTGGAAACTTTGAGTTGCGTTCGCTTGATGACACTGCTGGTATCAAATTTTCCAGATTAGTTCCAACCTAG VLKLASMDSTSPDFYQNVVVLRHADRLDFSDHSWAAMAARPWDPPLMEQGILRAFNTGRVITNDIGSPIHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSASPSQLKVSIEYGLCEKLNHKAIPAEVAPMDWNSGFNITDLESILPTGSTDHSVKPIYEEVPTTIRSRFQQVFKTLADKYHSQNIMLITHGIGVGVIVSTVLKDTRVVHVDYCGYAILRRPIFLSGGSFVAGNFELRSLDDTAGIKFSRLVPT
BLAST of ClCG05G000370 vs. TrEMBL
Match: B9GP96_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14190g PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 8.8e-66 Identity = 134/253 (52.96%), Postives = 174/253 (68.77%), Query Frame = 1
BLAST of ClCG05G000370 vs. TrEMBL
Match: A0A067KAK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14610 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.7e-65 Identity = 126/237 (53.16%), Postives = 170/237 (71.73%), Query Frame = 1
BLAST of ClCG05G000370 vs. TrEMBL
Match: I1KJM9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G110600 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.8e-64 Identity = 125/255 (49.02%), Postives = 174/255 (68.24%), Query Frame = 1
BLAST of ClCG05G000370 vs. TrEMBL
Match: A0A0B2RMX8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026116 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.8e-64 Identity = 125/255 (49.02%), Postives = 174/255 (68.24%), Query Frame = 1
BLAST of ClCG05G000370 vs. TrEMBL
Match: B9RD29_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609120 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 124/261 (47.51%), Postives = 177/261 (67.82%), Query Frame = 1
BLAST of ClCG05G000370 vs. TAIR10
Match: AT3G60450.1 (AT3G60450.1 Phosphoglycerate mutase family protein) HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62 Identity = 124/259 (47.88%), Postives = 165/259 (63.71%), Query Frame = 1
BLAST of ClCG05G000370 vs. TAIR10
Match: AT3G60440.1 (AT3G60440.1 Phosphoglycerate mutase family protein) HSP 1 Score: 227.6 bits (579), Expect = 8.5e-60 Identity = 125/264 (47.35%), Postives = 168/264 (63.64%), Query Frame = 1
BLAST of ClCG05G000370 vs. TAIR10
Match: AT3G60420.2 (AT3G60420.2 Phosphoglycerate mutase family protein) HSP 1 Score: 166.8 bits (421), Expect = 1.8e-41 Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 1
HSP 2 Score: 93.6 bits (231), Expect = 1.9e-19 Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of ClCG05G000370 vs. NCBI nr
Match: gi|659074827|ref|XP_008437818.1| (PREDICTED: uncharacterized protein LOC103483133 isoform X2 [Cucumis melo]) HSP 1 Score: 411.0 bits (1055), Expect = 1.5e-111 Identity = 205/252 (81.35%), Postives = 223/252 (88.49%), Query Frame = 1
BLAST of ClCG05G000370 vs. NCBI nr
Match: gi|659074825|ref|XP_008437817.1| (PREDICTED: uncharacterized protein LOC103483133 isoform X1 [Cucumis melo]) HSP 1 Score: 408.7 bits (1049), Expect = 7.6e-111 Identity = 205/258 (79.46%), Postives = 223/258 (86.43%), Query Frame = 1
BLAST of ClCG05G000370 vs. NCBI nr
Match: gi|743804675|ref|XP_011017416.1| (PREDICTED: uncharacterized protein LOC105120755 [Populus euphratica]) HSP 1 Score: 261.2 bits (666), Expect = 2.0e-66 Identity = 138/270 (51.11%), Postives = 182/270 (67.41%), Query Frame = 1
BLAST of ClCG05G000370 vs. NCBI nr
Match: gi|1012011575|ref|XP_015948208.1| (PREDICTED: uncharacterized protein LOC107473173 [Arachis duranensis]) HSP 1 Score: 260.4 bits (664), Expect = 3.3e-66 Identity = 129/243 (53.09%), Postives = 175/243 (72.02%), Query Frame = 1
BLAST of ClCG05G000370 vs. NCBI nr
Match: gi|224067580|ref|XP_002302509.1| (hypothetical protein POPTR_0002s14190g [Populus trichocarpa]) HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65 Identity = 134/253 (52.96%), Postives = 174/253 (68.77%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|