ClCG05G000060 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATTATTGGAGTCGGCCTGCCCCACGAGGCCACAACGCATAAATAACTTCTATAGGAAGTCGAAGATCGCCGTCGTCATCATCCACTACACCCAGTCAATGCAAGTCTTCGTATATGATGGAGTAGATTCCGCCTCTCCCTCTGTCTTTGCTCCTGCTCCACCTCCAGCTGTTATAAACATCCACTACCGACGCACTGGCTATCAAATTCATGGCCAGCTTTACATTTCCTCCTCATTATTTATGGCCGATTGGTTTTCGATTCCGTCCCACGGAGGAGGAGCTCATTACCCACTACCTGAAGAACAAGATTCTTGGCCACGAATCTCTTGTTCAATATATCCGTGAGATTGATCTCTACAAGTACGAGCCCTGGGAACTCCCTGGTAGGTATTTGATTTTAGATTTTTTATGATCCTCTGCAGCAACTGTGGTTCTATCCTTCTCCCTGTCCCTGTGCAGAGCAATCCCTTTTCGAGTCTGATAATTATGAGTGGTTTTTCTTCCGAGCCCACACGTCCAAAACTAAAAGGACCACGGGTAATGGCGGCTGGAGAACCACCGGTGACGACCGCCCAATCAAGGCTCGAGGAACCAACAAAGTGATCGCAACTAGAAAAATTTTAGTGTTCTATGAAGGCCGGAGCTCCGATGCTGTAAAGACCAACTGGGTCATACACGAGTATCACCTTCACCCAGATAGAAACATCCCATACCAGGTTTTTTTACTACTCTTTCCTGTTGCATCCATTTCTCATGTATCTGTAACCTTTATAAACATATGTATATATATTGGCTTCTGGGTTATATGACCTCGCCTTCGATATGTATTCGGTGATCTAGAGTTTGTCTGTTTACCACACATACAGCAAGTTTTCGTCTGTCACAAACATAGCTGCATTAAATTTCAGCTTTTTAAAGTTTTTTTTTATTCCCAGTTTGAGTATGTTTTTCATTTCAATGACGCTTTTGTCATAACCTTGCCCTTCCTTTGTTCTGTGGCCCATGTAGAGGCAATTCGTCGTTTGTCGATTGAAGGAAAATGCAGAAGAGATAGATGTTTCAACTTGCGATCAAGATAGACAGACCAGTAGTGTTGCTTCTCACCTCAAAAAGAAAGGCACACAGAGACCAATCCAGGTGGTAAGATTATCCTGTATGAACATTTTGAAGATCAACTTTTATGCAGAGCTTGAGATGGCTACTTAATGTTAATTCTAGCTTGTTTGCAAATTTTTAACCCAGTTAAATGGAGGCGCTCAAGCAAATGGGGAATCGGTCCTTCAGCCCCTGTGGCATCCTACACGACAACTTGCTTTGGCAGATTTTCCATCCGTCAATGTAAATATGCAACCGATACAGGCTCCACCTTCTGAAAATGCAGTTAGTCTCACAGAGATTTTGAACTCGATTTTTGTTCCGGACGAATACTTGGATGATGCGACCTCAAAGATGTGCGAGTCCCCATGGTGTTCAGAACCAGAGCCAGCTTTAATGGACTTTCAACTTTCCAGTGACAACGATGGTGAAGTAAATAACCAATTATTACAGCCCAAAGCTTCTAAGACTGAACTTAATTTCTCTGAGCTCTTGTTGAACTCGGTCTTGGTCGAAGATGAAAACTGTGATGAGGTGACATCAAACAATGGCATTGATAGCTACAACGAAGAGGAATTAGAGAGAATGGTTTATGAACTTCAAGCCGACATATGTAGGAGCGACACTGATACTGATACGACCTTTGGCTTCCCGGTAAAAATTATTGCAGACCATTAACTTTACTTGAATTGTTTTGCTATGTCATTTTAAGTGGGGGAATTGATGACAAGGTTGCAGCAACACTTATCTTCTCATTCTTTGCTCTTTCTTCTGTTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCATATTCGTTTTCTTATAAGTTCAGGTACTAGTGAATCTTATTCATCGAGTAGTTATCTGCATATTTCAGGTCTTGCAGAACAATCACATTTCTCCAAGCTGGTTGCATGAAGGTACAAGGTCAACAATTAAAAAGTCGCGTAGAAGCCCCCTCACGGTAAAGCGTCTTCAGTACAGAGAGGAAAAGGATGAGTTGCGAGGCAAATCTTCTGTCCTATTGGGTGAAGGTGAATCTCGAATCTGTGGTACTTCTATTGACGGTGAGAAGCCTGATCTTGGACCAACGACTTTCAAAGCCCAACGTCAACCAAAGTCCAGCAACGTTGTAGCCTACAAAGGTGAACCAAAACGAGACCAATTGAAGAGGGAAATTCGAAGTAAAATAATGCCCCAAAACAAGGTGAGAGGATAAAATTGTGCTCTTTAAAACCATATTCAATGTGTAGAAGCTCTTATTGTTGTAAAAAAACGTGTCAAGATGATTTTCAGATAGCCTTTGACTCTGATGTTCAATTCTGCAGGCTAAAGAAGATGAGAAACATATAGAAATTGTTGATTTACCCCAGCTATCAGTGACACATTCTAATAATGAACTGAAGGGTGAAGCGGGCAACAAGGCAACCAAGAGTGGAGTGTCATGTTGTGGATCTATTGGGAGTACAAGAAATAGCTTTTCGTATATCCTAACTACAAAACGCATTGACCACAAATCGAGTCTCCCGGTAATCTATGTTGCTAAAGCATTTTTAGGCATCATAATGTTAATAATGTTTGCTCAAGAAGTGCTGCTATACAGACACAGCAGGCGCTAAAGATCAGCGCCCATTAGTTGCAGTACAGTACAGATGATTAATTTATGATGAAGCATGTATGTTTGTTTCTTTCTTGGGGTATCTGCTGAAGCTGCTGTGTGCTTCTTATGTTACCATAAAGAGAAATAATTAGGGTTCTTTAAATATAGGGCTCTAACGTTCTTAAAGAAATGCATGCTCTTTTTGGATTGATACTACCGGATGTACGGAAGAGTGTGAACACGTGATGTGATGTTGAATATAACAATCTTTTGGTTCTGTAATAAATCTATCTGGGACATCTACATCTGCA GAATTATTGGAGTCGGCCTGCCCCACGAGGCCACAACGCATAAATAACTTCTATAGGAAGTCGAAGATCGCCGTCGTCATCATCCACTACACCCAGTCAATGCAAGTCTTCGTATATGATGGAGTAGATTCCGCCTCTCCCTCTGTCTTTGCTCCTGCTCCACCTCCAGCTGTTATAAACATCCACTACCGACGCACTGGCTATCAAATTCATGGCCAGCTTTACATTTCCTCCTCATTATTTATGGCCGATTGGTTTTCGATTCCGTCCCACGGAGGAGGAGCTCATTACCCACTACCTGAAGAACAAGATTCTTGGCCACGAATCTCTTGTTCAATATATCCGTGAGATTGATCTCTACAAGTACGAGCCCTGGGAACTCCCTGAGCAATCCCTTTTCGAGTCTGATAATTATGAGTGGTTTTTCTTCCGAGCCCACACGTCCAAAACTAAAAGGACCACGGGTAATGGCGGCTGGAGAACCACCGGTGACGACCGCCCAATCAAGGCTCGAGGAACCAACAAAGTGATCGCAACTAGAAAAATTTTAGTGTTCTATGAAGGCCGGAGCTCCGATGCTGTAAAGACCAACTGGGTCATACACGAGTATCACCTTCACCCAGATAGAAACATCCCATACCAGAGGCAATTCGTCGTTTGTCGATTGAAGGAAAATGCAGAAGAGATAGATGTTTCAACTTGCGATCAAGATAGACAGACCAGTAGTGTTGCTTCTCACCTCAAAAAGAAAGGCACACAGAGACCAATCCAGGTGTTAAATGGAGGCGCTCAAGCAAATGGGGAATCGGTCCTTCAGCCCCTGTGGCATCCTACACGACAACTTGCTTTGGCAGATTTTCCATCCGTCAATGTAAATATGCAACCGATACAGGCTCCACCTTCTGAAAATGCAGTTAGTCTCACAGAGATTTTGAACTCGATTTTTGTTCCGGACGAATACTTGGATGATGCGACCTCAAAGATGTGCGAGTCCCCATGGTGTTCAGAACCAGAGCCAGCTTTAATGGACTTTCAACTTTCCAGTGACAACGATGGTGAAGTAAATAACCAATTATTACAGCCCAAAGCTTCTAAGACTGAACTTAATTTCTCTGAGCTCTTGTTGAACTCGGTCTTGGTCGAAGATGAAAACTGTGATGAGGTGACATCAAACAATGGCATTGATAGCTACAACGAAGAGGAATTAGAGAGAATGGTTTATGAACTTCAAGCCGACATATGTAGGAGCGACACTGATACTGATACGACCTTTGGCTTCCCGGTCTTGCAGAACAATCACATTTCTCCAAGCTGGTTGCATGAAGGTACAAGGTCAACAATTAAAAAGTCGCGTAGAAGCCCCCTCACGGTAAAGCGTCTTCAGTACAGAGAGGAAAAGGATGAGTTGCGAGGCAAATCTTCTGTCCTATTGGGTGAAGGTGAATCTCGAATCTGTGGTACTTCTATTGACGGTGAGAAGCCTGATCTTGGACCAACGACTTTCAAAGCCCAACGTCAACCAAAGTCCAGCAACGTTGTAGCCTACAAAGGTGAACCAAAACGAGACCAATTGAAGAGGGAAATTCGAAGTAAAATAATGCCCCAAAACAAGGCTAAAGAAGATGAGAAACATATAGAAATTGTTGATTTACCCCAGCTATCAGTGACACATTCTAATAATGAACTGAAGGGTGAAGCGGGCAACAAGGCAACCAAGAGTGGAGTGTCATGTTGTGGATCTATTGGGAGTACAAGAAATAGCTTTTCGTATATCCTAACTACAAAACGCATTGACCACAAATCGAGTCTCCCGGTAATCTATGTTGCTAAAGCATTTTTAGGCATCATAATGTTAATAATGTTTGCTCAAGAAGTGCTGCTATACAGACACAGCAGGCGCTAAAGATCAGCGCCCATTAGTTGCAGTACAGTACAGATGATTAATTTATGATGAAGCATGTATGTTTGTTTCTTTCTTGGGGTATCTGCTGAAGCTGCTGTGTGCTTCTTATGTTACCATAAAGAGAAATAATTAGGGTTCTTTAAATATAGGGCTCTAACGTTCTTAAAGAAATGCATGCTCTTTTTGGATTGATACTACCGGATGTACGGAAGAGTGTGAACACGTGATGTGATGTTGAATATAACAATCTTTTGGTTCTGTAATAAATCTATCTGGGACATCTACATCTGCA ATGGCCAGCTTTACATTTCCTCCTCATTATTTATGGCCGATTGGTTTTCGATTCCGTCCCACGGAGGAGGAGCTCATTACCCACTACCTGAAGAACAAGATTCTTGGCCACGAATCTCTTGTTCAATATATCCGTGAGATTGATCTCTACAAGTACGAGCCCTGGGAACTCCCTGAGCAATCCCTTTTCGAGTCTGATAATTATGAGTGGTTTTTCTTCCGAGCCCACACGTCCAAAACTAAAAGGACCACGGGTAATGGCGGCTGGAGAACCACCGGTGACGACCGCCCAATCAAGGCTCGAGGAACCAACAAAGTGATCGCAACTAGAAAAATTTTAGTGTTCTATGAAGGCCGGAGCTCCGATGCTGTAAAGACCAACTGGGTCATACACGAGTATCACCTTCACCCAGATAGAAACATCCCATACCAGAGGCAATTCGTCGTTTGTCGATTGAAGGAAAATGCAGAAGAGATAGATGTTTCAACTTGCGATCAAGATAGACAGACCAGTAGTGTTGCTTCTCACCTCAAAAAGAAAGGCACACAGAGACCAATCCAGGTGTTAAATGGAGGCGCTCAAGCAAATGGGGAATCGGTCCTTCAGCCCCTGTGGCATCCTACACGACAACTTGCTTTGGCAGATTTTCCATCCGTCAATGTAAATATGCAACCGATACAGGCTCCACCTTCTGAAAATGCAGTTAGTCTCACAGAGATTTTGAACTCGATTTTTGTTCCGGACGAATACTTGGATGATGCGACCTCAAAGATGTGCGAGTCCCCATGGTGTTCAGAACCAGAGCCAGCTTTAATGGACTTTCAACTTTCCAGTGACAACGATGGTGAAGTAAATAACCAATTATTACAGCCCAAAGCTTCTAAGACTGAACTTAATTTCTCTGAGCTCTTGTTGAACTCGGTCTTGGTCGAAGATGAAAACTGTGATGAGGTGACATCAAACAATGGCATTGATAGCTACAACGAAGAGGAATTAGAGAGAATGGTTTATGAACTTCAAGCCGACATATGTAGGAGCGACACTGATACTGATACGACCTTTGGCTTCCCGGTCTTGCAGAACAATCACATTTCTCCAAGCTGGTTGCATGAAGGTACAAGGTCAACAATTAAAAAGTCGCGTAGAAGCCCCCTCACGGTAAAGCGTCTTCAGTACAGAGAGGAAAAGGATGAGTTGCGAGGCAAATCTTCTGTCCTATTGGGTGAAGGTGAATCTCGAATCTGTGGTACTTCTATTGACGGTGAGAAGCCTGATCTTGGACCAACGACTTTCAAAGCCCAACGTCAACCAAAGTCCAGCAACGTTGTAGCCTACAAAGGTGAACCAAAACGAGACCAATTGAAGAGGGAAATTCGAAGTAAAATAATGCCCCAAAACAAGGCTAAAGAAGATGAGAAACATATAGAAATTGTTGATTTACCCCAGCTATCAGTGACACATTCTAATAATGAACTGAAGGGTGAAGCGGGCAACAAGGCAACCAAGAGTGGAGTGTCATGTTGTGGATCTATTGGGAGTACAAGAAATAGCTTTTCGTATATCCTAACTACAAAACGCATTGACCACAAATCGAGTCTCCCGGTAATCTATGTTGCTAAAGCATTTTTAGGCATCATAATGTTAATAATGTTTGCTCAAGAAGTGCTGCTATACAGACACAGCAGGCGCTAA MASFTFPPHYLWPIGFRFRPTEEELITHYLKNKILGHESLVQYIREIDLYKYEPWELPEQSLFESDNYEWFFFRAHTSKTKRTTGNGGWRTTGDDRPIKARGTNKVIATRKILVFYEGRSSDAVKTNWVIHEYHLHPDRNIPYQRQFVVCRLKENAEEIDVSTCDQDRQTSSVASHLKKKGTQRPIQVLNGGAQANGESVLQPLWHPTRQLALADFPSVNVNMQPIQAPPSENAVSLTEILNSIFVPDEYLDDATSKMCESPWCSEPEPALMDFQLSSDNDGEVNNQLLQPKASKTELNFSELLLNSVLVEDENCDEVTSNNGIDSYNEEELERMVYELQADICRSDTDTDTTFGFPVLQNNHISPSWLHEGTRSTIKKSRRSPLTVKRLQYREEKDELRGKSSVLLGEGESRICGTSIDGEKPDLGPTTFKAQRQPKSSNVVAYKGEPKRDQLKREIRSKIMPQNKAKEDEKHIEIVDLPQLSVTHSNNELKGEAGNKATKSGVSCCGSIGSTRNSFSYILTTKRIDHKSSLPVIYVAKAFLGIIMLIMFAQEVLLYRHSRR
BLAST of ClCG05G000060 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 8.5e-30 Identity = 71/164 (43.29%), Postives = 101/164 (61.59%), Query Frame = 1
BLAST of ClCG05G000060 vs. Swiss-Prot
Match: NTL9_ARATH (Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-29 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 1
BLAST of ClCG05G000060 vs. Swiss-Prot
Match: NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-29 Identity = 75/179 (41.90%), Postives = 100/179 (55.87%), Query Frame = 1
BLAST of ClCG05G000060 vs. Swiss-Prot
Match: NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana GN=NTL8 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.2e-29 Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of ClCG05G000060 vs. Swiss-Prot
Match: NAC62_ARATH (NAC domain-containing protein 62 OS=Arabidopsis thaliana GN=NAC062 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.2e-29 Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 1
BLAST of ClCG05G000060 vs. TrEMBL
Match: A0A0A0L657_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062590 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81 Identity = 236/565 (41.77%), Postives = 302/565 (53.45%), Query Frame = 1
BLAST of ClCG05G000060 vs. TrEMBL
Match: A0A0A0LWI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572390 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.3e-68 Identity = 200/576 (34.72%), Postives = 274/576 (47.57%), Query Frame = 1
BLAST of ClCG05G000060 vs. TrEMBL
Match: A0A072TYB6_MEDTR (NAC transcription factor-like protein OS=Medicago truncatula GN=MTR_8g023930 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 7.0e-39 Identity = 89/184 (48.37%), Postives = 119/184 (64.67%), Query Frame = 1
BLAST of ClCG05G000060 vs. TrEMBL
Match: V7APU1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G121100g PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.6e-38 Identity = 106/300 (35.33%), Postives = 160/300 (53.33%), Query Frame = 1
BLAST of ClCG05G000060 vs. TrEMBL
Match: K7KZN8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G047900 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 4.5e-38 Identity = 111/301 (36.88%), Postives = 157/301 (52.16%), Query Frame = 1
BLAST of ClCG05G000060 vs. TAIR10
Match: AT1G33060.2 (AT1G33060.2 NAC 014) HSP 1 Score: 133.3 bits (334), Expect = 4.8e-31 Identity = 71/164 (43.29%), Postives = 101/164 (61.59%), Query Frame = 1
BLAST of ClCG05G000060 vs. TAIR10
Match: AT4G35580.2 (AT4G35580.2 NAC transcription factor-like 9) HSP 1 Score: 132.9 bits (333), Expect = 6.2e-31 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 1
BLAST of ClCG05G000060 vs. TAIR10
Match: AT5G17260.1 (AT5G17260.1 NAC domain containing protein 86) HSP 1 Score: 132.9 bits (333), Expect = 6.2e-31 Identity = 75/179 (41.90%), Postives = 100/179 (55.87%), Query Frame = 1
BLAST of ClCG05G000060 vs. TAIR10
Match: AT4G17980.1 (AT4G17980.1 NAC domain containing protein 71) HSP 1 Score: 132.1 bits (331), Expect = 1.1e-30 Identity = 76/201 (37.81%), Postives = 106/201 (52.74%), Query Frame = 1
BLAST of ClCG05G000060 vs. TAIR10
Match: AT2G27300.1 (AT2G27300.1 NTM1-like 8) HSP 1 Score: 131.3 bits (329), Expect = 1.8e-30 Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of ClCG05G000060 vs. NCBI nr
Match: gi|659096420|ref|XP_008449087.1| (PREDICTED: NAC domain-containing protein 7-like [Cucumis melo]) HSP 1 Score: 447.2 bits (1149), Expect = 4.2e-122 Identity = 290/567 (51.15%), Postives = 343/567 (60.49%), Query Frame = 1
BLAST of ClCG05G000060 vs. NCBI nr
Match: gi|778675913|ref|XP_011650496.1| (PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 311.2 bits (796), Expect = 3.6e-81 Identity = 236/565 (41.77%), Postives = 302/565 (53.45%), Query Frame = 1
BLAST of ClCG05G000060 vs. NCBI nr
Match: gi|778675916|ref|XP_004149581.2| (PREDICTED: protein NTM1-like 8 isoform X2 [Cucumis sativus]) HSP 1 Score: 311.2 bits (796), Expect = 3.6e-81 Identity = 236/565 (41.77%), Postives = 302/565 (53.45%), Query Frame = 1
BLAST of ClCG05G000060 vs. NCBI nr
Match: gi|659099647|ref|XP_008450706.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]) HSP 1 Score: 271.2 bits (692), Expect = 4.2e-69 Identity = 198/568 (34.86%), Postives = 271/568 (47.71%), Query Frame = 1
BLAST of ClCG05G000060 vs. NCBI nr
Match: gi|778662593|ref|XP_011659914.1| (PREDICTED: NAC transcription factor 25-like [Cucumis sativus]) HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67 Identity = 200/576 (34.72%), Postives = 274/576 (47.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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