ClCG05G000010 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAGATGCCATAATTTGATCTCCATCTTTTTCTCTGTCCAACAAATCATTGTCCCTTCCATTGAAATGGTTTGCTGTTGGGCAATGCTGGCGGTATGAGAAAATGACTAGAGGTTTCCGTTGTGAGCATCACCAATGGAATATGGATATCATTGGCGTAGCTGAGGTTATGATATGTGAGGTTATTAATTTTTGGTTGTAGCACAATTGTGTCTACCAGTTGGAGTTGGACTTTGGAGACAGGTATCCCTCACCTCCCCAACTTTCGGCTCCTACTCTTGGACAATGGGTAATTGTTTTTCGAACGACGTCGTTGGCCGGTCTGCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAACGTTGCCATAGATTGTTTCTTGTTGTCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGGTTCTCTTCCCTTTTCTGTTTACACCTGCTTCATTCAATTATTTGGCTGTACCATTTCTGTTCCTTCATTTTTTTGGTGCCTCTAACCTTTCTACTTTGTTGTTGTTCCCGATCGGGTTCTATTCTCTTATGGGGTATACATTTTAGATTTGCTGGACATGTAGTCATGGCTTTTTCCTCTGTTGTTGCTTATTCTTAACTTCATAAAATTTATGGCCATCTAACTCGTTTCATCCTCCTATTTCTTCTCCTCTTCTAATCACAGCTTTCATTCTCTGCATCTAACTTGCGTGACGGTGATATGTTCTCCAAGGTCGGTATCTCTTTGATGGACGTTGAAAGACTGTACATCTTGATAATGATTTTCATGCAAGATATAGGCTTTTATTTCCTTTGAAATAATAACATTCATATATTAGGCATCCTTATACCGGAGTTTACAAGGTTGTACTTAGATGTTTCATTGCTAGACTGAGTGAAAAGATAGAATCAAGTCGCTGAGTTACTTCCATTTTTGGAGCTCTTAGTGATTGAGGATAATTAATATATATTTACTTGTTGGGAAGTCACATTTTTTGCAAGTTTGGTTTACTTTGGATTAATTAATGGTAGTGTCAATACCCGATACCATTCTTTCCTCAAAGAACTCATTGTAAGTTTTATTTTCCTCAGAGTGATCCAATGGTGGTTATCTACACAAAAGGAAGGGACGGAACACTAGAAGAGCTTCACCGTACAGAAGTAGTTCAAAATTCCTTAAATCCAAAATGGATCCATAAGCTTAACATTACCTATCAATTTGAGGTTGTGCAAACTTTGGTGTAAGTTTAAATGGTCATTTTGCCATCTCTAGTTCATCAGATGTACATCTTACTGGTGCTGTGATAATCAAACCATTAATATGTTATGGCAGGTTTTTTGTATATGACGTGGATACTCAATATCAAAACCTAGGAGTAAAGGTAGGCATCCATGAGAATTTGCATGGTTGCATATCCTTGCCGAATAAAGTTAAATTTTGCCTGCAGATCTGTTATTAACCACATACATAGTAGATCCAGTATTACCAATACCCTCAAGAGTGAAGACTGATATGTAATATTTGGTTCAGTTTTTTTCCCCCCTCATCTTCTTTTCCCTACTGGATAATGGACATCAATCCTTAACTATGTTGACTTGTTGTTGGTTTCAATTCAAACAGTTATTATAAAAGTGTTATACTCGCTACATCGTAATTATATACCACAAAATTTTGCTAACAATGGATATTCTAAATCATGCAGATGCTGAAGCTAGATGAGCAGCAATATCTCGGTGAGGCAACTTGTGTACTATCTGAGGTATTGCATGTAGTTTAAAATGCATATTCTATCATGCTGAGTATTCACTTGCATATGATTTGAATGCTATATGCTGAATGTGGCTATTGTATATTTAGTATGCTTTCCATTGCAATACAGATGGATAAAATTTGCAATCCAAGGTGAATTTTGTAGTTTATGTATTCAGATTTATTTTCATCACTAGCCTTTTCTATCTTGCAGATAGTTACCCAATCAGACAGGTCACTTACATTGGATCTTGTATATAGAGAAGAGTCAACCAGCTCTACTCTGCCACACCACTGTGGAAAACTTACTGTTCATGCTGAGGAGTGTGTTAGCTCAAAGACCACAACAGAGATGATATTAAGGTGTTCAGACTTGGAACACAAGGATCTCTTCTCAAGAATTGTATGCAGTGCCGAGATGTTAATTCATTTTCTTTTGGTATCTGTAAAAGGAATGTGATTTATGTTTGTTGCATTTCTGATTCTTGGTATAGGACCCTTTTCTGGTTATTTCAAAAATTGTGGAGAGTAAGAGCTCAATTCCAGTTTGCAAAACAGAAGTCATAAAGAATGATTTGAATCCCACATGGAAGCCTGTATTCTTGAATATGCAACAAGTTGGAAGCAAGGTACAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGACAAACCCCCCCCCCCCCCCTCCCACCCCACCACACACACCAAAGTAAGCACGGGCCATCATGCTAATCATTGTCATGAATTTAGTTTTCATGGACCGTTATAAATCACATTATATGTTTTTGTGCTTTTGTATTTCATCTTTCCTTGCAATTCATTTTTTTGTAAGTTGTTGTCTATAGTGTTTTGAAAGGCCCAAATAGATGGCACCTCGCCTCAAAGAAGTGAGGCATGAGGAAGAAACTGCGCGCCTTGTAGCACCTTCCAAGAAGTGCAGAGGCGTTCTTAAGCACCCCTATAAGGGCTTGATTAGAAAAAAGGAAATCTTAAAATGTAGAGTTGCTTGTAATTTAGGGTTATTAAATATATATATATAATTGGTTAAACCTAATTCCAACTTTTGCATCATTATACGTTTGGCACTACATTACACCACATTTATAAGTTTTAGGTCGATTCTTCTTCAAAAAATAGAGGAATATGAAACAATATTCTCGATTCTTCTTCTTCTTCACCTCTGCACTACACACCCCTCTTCGATTATTCTTCAAAAAACAGAGGAATGGCAAATGACATTCTTCTTCACCTCTCATCATCAATTCTTGTTGAAAAAAACAGAGGAATATCAAAATTATTATTCCCCAATCCTGGCCTATTCTTCTTCTTCTTCACCTCAATGCCTCCAACACCACTAGCATTTCATCAAATTTTATTTTTTTTATTTTTTTTTAAAAAAAAGTAATGTAGTGCACGTATGACTTGTCCAGCTTTGATTTTTCTTCAGAAAAACAGAGATGAAGACTCCAAAACAGCAACCTCCATCTCTTCTTTGTTGCCAGCCACCATTATTTTGCTGCCACATTGGAGTCTCTATTCTGTCTTAAAAAAACAAAGGTCTACAAAACAAAGAAGACTCTCCAAAACAGCAGCCTTCATCTCTTCTTCTTTACTGCCAGCCAACATTATTTTGCTACCACATCGGGATCTCTGTTTTGTCTTATAAAAACAGAGACCTTCAAAACAACCAAATATTTTTATTTGGAATTCAGAAGTCTGG TATAGATGCCATAATTTGATCTCCATCTTTTTCTCTGTCCAACAAATCATTGTCCCTTCCATTGAAATGGTTTGCTGTTGGGCAATGCTGGCGGTATCCCTCACCTCCCCAACTTTCGGCTCCTACTCTTGGACAATGGGTAATTGTTTTTCGAACGACGTCGTTGGCCGGTCTGCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAACGTTGCCATAGATTGTTTCTTGTTGTCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGGTTCTCTTCCCTTTTCTGTTTACACCTGCTTCATTCAATTATTTGGCTCTTTCATTCTCTGCATCTAACTTGCGTGACGGTGATATGTTCTCCAAGAGTGATCCAATGGTGGTTATCTACACAAAAGGAAGGGACGGAACACTAGAAGAGCTTCACCGTACAGAAGTAGTTCAAAATTCCTTAAATCCAAAATGGATCCATAAGCTTAACATTACCTATCAATTTGAGGTTGTGCAAACTTTGGTGTTTTTTGTATATGACGTGGATACTCAATATCAAAACCTAGGAGTAAAGATGCTGAAGCTAGATGAGCAGCAATATCTCGGTGAGGCAACTTGTGTACTATCTGAGATAGTTACCCAATCAGACAGGTCACTTACATTGGATCTTGTATATAGAGAAGAGTCAACCAGCTCTACTCTGCCACACCACTGTGGAAAACTTACTGTTCATGCTGAGGAGTGTGTTAGCTCAAAGACCACAACAGAGATGATATTAAGGTGTTCAGACTTGGAACACAAGGATCTCTTCTCAAGAATTGACCCTTTTCTGGTTATTTCAAAAATTGTGGAGAGTAAGAGCTCAATTCCAGTTTGCAAAACAGAAGTCATAAAGAATGATTTGAATCCCACATGGAAGCCTGTATTCTTGAATATGCAACAAGTTGGAAGCAAGAAAAACAGAGATGAAGACTCCAAAACAGCAACCTCCATCTCTTCTTTGTTGCCAGCCACCATTATTTTGCTGCCACATTGGAGTCTCTATTCTGTCTTAAAAAAACAAAGGTCTACAAAACAAAGAAGACTCTCCAAAACAGCAGCCTTCATCTCTTCTTCTTTACTGCCAGCCAACATTATTTTGCTACCACATCGGGATCTCTGTTTTGTCTTATAAAAACAGAGACCTTCAAAACAACCAAATATTTTTATTTGGAATTCAGAAGTCTGG TATAGATGCCATAATTTGATCTCCATCTTTTTCTCTGTCCAACAAATCATTGTCCCTTCCATTGAAATGGTTTGCTGTTGGGCAATGCTGGCGGTATCCCTCACCTCCCCAACTTTCGGCTCCTACTCTTGGACAATGGGTAATTGTTTTTCGAACGACGTCGTTGGCCGGTCTGCCATTGGTGGTACTGCCTTCTCCCAAAGTACTACTTCCAACGTTGCCATAGATTGTTTCTTGTTGTCTCGGGGCTATCGGGGCCTCTATTCCCAGATCGAGGTTCTCTTCCCTTTTCTGTTTACACCTGCTTCATTCAATTATTTGGCTCTTTCATTCTCTGCATCTAACTTGCGTGACGGTGATATGTTCTCCAAGAGTGATCCAATGGTGGTTATCTACACAAAAGGAAGGGACGGAACACTAGAAGAGCTTCACCGTACAGAAGTAGTTCAAAATTCCTTAAATCCAAAATGGATCCATAAGCTTAACATTACCTATCAATTTGAGGTTGTGCAAACTTTGGTGTTTTTTGTATATGACGTGGATACTCAATATCAAAACCTAGGAGTAAAGATGCTGAAGCTAGATGAGCAGCAATATCTCGGTGAGGCAACTTGTGTACTATCTGAGATAGTTACCCAATCAGACAGGTCACTTACATTGGATCTTGTATATAGAGAAGAGTCAACCAGCTCTACTCTGCCACACCACTGTGGAAAACTTACTGTTCATGCTGAGGAGTGTGTTAGCTCAAAGACCACAACAGAGATGATATTAAGGTGTTCAGACTTGGAACACAAGGATCTCTTCTCAAGAATTGACCCTTTTCTGGTTATTTCAAAAATTGTGGAGAGTAAGAGCTCAATTCCAGTTTGCAAAACAGAAGTCATAAAGAATGATTTGAATCCCACATGGAAGCCTGTATTCTTGAATATGCAACAAGTTGGAAGCAAGAAAAACAGAGATGAAGACTCCAAAACAGCAACCTCCATCTCTTCTTTGTTGCCAGCCACCATTATTTTGCTGCCACATTGGAGTCTCTATTCTGTCTTAAAAAAACAAAGGTCTACAAAACAAAGAAGACTCTCCAAAACAGCAGCCTTCATCTCTTCTTCTTTACTGCCAGCCAACATTATTTTGCTACCACATCGGGATCTCTGTTTTGTCTTATAA YRCHNLISIFFSVQQIIVPSIEMVCCWAMLAVSLTSPTFGSYSWTMGNCFSNDVVGRSAIGGTAFSQSTTSNVAIDCFLLSRGYRGLYSQIEVLFPFLFTPASFNYLALSFSASNLRDGDMFSKSDPMVVIYTKGRDGTLEELHRTEVVQNSLNPKWIHKLNITYQFEVVQTLVFFVYDVDTQYQNLGVKMLKLDEQQYLGEATCVLSEIVTQSDRSLTLDLVYREESTSSTLPHHCGKLTVHAEECVSSKTTTEMILRCSDLEHKDLFSRIDPFLVISKIVESKSSIPVCKTEVIKNDLNPTWKPVFLNMQQVGSKKNRDEDSKTATSISSLLPATIILLPHWSLYSVLKKQRSTKQRRLSKTAAFISSSLLPANIILLPHRDLCFVL
BLAST of ClCG05G000010 vs. Swiss-Prot
Match: BON2_ARATH (Protein BONZAI 2 OS=Arabidopsis thaliana GN=BON2 PE=1 SV=2) HSP 1 Score: 308.1 bits (788), Expect = 1.3e-82 Identity = 163/275 (59.27%), Postives = 198/275 (72.00%), Query Frame = 1
BLAST of ClCG05G000010 vs. Swiss-Prot
Match: BON1_ARATH (Protein BONZAI 1 OS=Arabidopsis thaliana GN=BON1 PE=1 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 5.2e-79 Identity = 159/276 (57.61%), Postives = 193/276 (69.93%), Query Frame = 1
BLAST of ClCG05G000010 vs. Swiss-Prot
Match: BON3_ARATH (Protein BONZAI 3 OS=Arabidopsis thaliana GN=BON3 PE=1 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.2e-69 Identity = 140/280 (50.00%), Postives = 187/280 (66.79%), Query Frame = 1
BLAST of ClCG05G000010 vs. Swiss-Prot
Match: CPNE5_MOUSE (Copine-5 OS=Mus musculus GN=Cpne5 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.1e-27 Identity = 77/211 (36.49%), Postives = 106/211 (50.24%), Query Frame = 1
BLAST of ClCG05G000010 vs. Swiss-Prot
Match: CPNE3_HUMAN (Copine-3 OS=Homo sapiens GN=CPNE3 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 7.9e-27 Identity = 74/208 (35.58%), Postives = 111/208 (53.37%), Query Frame = 1
BLAST of ClCG05G000010 vs. TrEMBL
Match: A0A0A0L2U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116620 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.6e-127 Identity = 235/272 (86.40%), Postives = 244/272 (89.71%), Query Frame = 1
BLAST of ClCG05G000010 vs. TrEMBL
Match: B9RA61_RICCO (Copine, putative OS=Ricinus communis GN=RCOM_1503390 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 4.4e-93 Identity = 183/273 (67.03%), Postives = 218/273 (79.85%), Query Frame = 1
BLAST of ClCG05G000010 vs. TrEMBL
Match: D7SH78_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00210 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 5.8e-93 Identity = 188/274 (68.61%), Postives = 209/274 (76.28%), Query Frame = 1
BLAST of ClCG05G000010 vs. TrEMBL
Match: A5C5S4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032389 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 5.8e-93 Identity = 188/274 (68.61%), Postives = 209/274 (76.28%), Query Frame = 1
BLAST of ClCG05G000010 vs. TrEMBL
Match: M5WDU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003355mg PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92 Identity = 185/277 (66.79%), Postives = 212/277 (76.53%), Query Frame = 1
BLAST of ClCG05G000010 vs. TAIR10
Match: AT5G07300.1 (AT5G07300.1 Calcium-dependent phospholipid-binding Copine family protein) HSP 1 Score: 308.1 bits (788), Expect = 7.5e-84 Identity = 163/275 (59.27%), Postives = 198/275 (72.00%), Query Frame = 1
BLAST of ClCG05G000010 vs. TAIR10
Match: AT5G61900.1 (AT5G61900.1 Calcium-dependent phospholipid-binding Copine family protein) HSP 1 Score: 296.2 bits (757), Expect = 2.9e-80 Identity = 159/276 (57.61%), Postives = 193/276 (69.93%), Query Frame = 1
BLAST of ClCG05G000010 vs. TAIR10
Match: AT1G08860.1 (AT1G08860.1 Calcium-dependent phospholipid-binding Copine family protein) HSP 1 Score: 264.2 bits (674), Expect = 1.2e-70 Identity = 140/280 (50.00%), Postives = 187/280 (66.79%), Query Frame = 1
BLAST of ClCG05G000010 vs. NCBI nr
Match: gi|659074687|ref|XP_008437742.1| (PREDICTED: protein BONZAI 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 467.2 bits (1201), Expect = 2.7e-128 Identity = 235/272 (86.40%), Postives = 246/272 (90.44%), Query Frame = 1
BLAST of ClCG05G000010 vs. NCBI nr
Match: gi|778676563|ref|XP_011650609.1| (PREDICTED: protein BONZAI 1-like [Cucumis sativus]) HSP 1 Score: 464.2 bits (1193), Expect = 2.3e-127 Identity = 235/272 (86.40%), Postives = 244/272 (89.71%), Query Frame = 1
BLAST of ClCG05G000010 vs. NCBI nr
Match: gi|659074689|ref|XP_008437743.1| (PREDICTED: protein BONZAI 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 359.8 bits (922), Expect = 6.2e-96 Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 1
BLAST of ClCG05G000010 vs. NCBI nr
Match: gi|1009142109|ref|XP_015888545.1| (PREDICTED: protein BONZAI 1 [Ziziphus jujuba]) HSP 1 Score: 350.5 bits (898), Expect = 3.7e-93 Identity = 185/277 (66.79%), Postives = 214/277 (77.26%), Query Frame = 1
BLAST of ClCG05G000010 vs. NCBI nr
Match: gi|1009169338|ref|XP_015865610.1| (PREDICTED: protein BONZAI 1-like [Ziziphus jujuba]) HSP 1 Score: 350.1 bits (897), Expect = 4.9e-93 Identity = 185/277 (66.79%), Postives = 214/277 (77.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |