ClCG04G011060 (gene) Watermelon (Charleston Gray)

NameClCG04G011060
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionreceptor kinase 2 LENGTH=847
LocationCG_Chr04 : 26057763 .. 26058203 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAGTTCAATTCCATACCAACTTCTCATTGCCTCTCTGATTCTGGCGTCAACTTGACCGGTCGGAACTTCCATCCCCGTCAGAACGAGCTCATCGGCGCAATCACCCAAGCTCTGCCTGGCGGCGTTGTTTGAATGCTTTCGATGGGGCTTTTGTCTTCTCTCTGCGTCTGCTTGCAGAAAAGACTTAAAGCAGCTAATTCTGCGAGTGACGATGAAGCGGATGATGAAGATGTATCCACTGACATCTTCTTTGAACTAAGTTCTTTGCAAATTGCAACTAATTTCTTTTCCGAGGCGAATAAACTCGGCAATGGAGGGTTTGGGCCCGTCTACAAGGTACGATTCGTTTGTTCTGACCTAATGGATTGTTAGGCATTGTTCTTGGAAGTTGAAATGTTGAATATCTTCGTTCTGTTTTCTCATTTTCGACTCTGA

mRNA sequence

ATGAGAAAGTTCAATTCCATACCAACTTCTCATTGCCTCTCTGATTCTGGCGTCAACTTGACCGGTCGGAACTTCCATCCCCGTCAGAACGAGCTCATCGGCGCAATCACCCAAGCTCTGCCTGGCGGCGTTAAAAGACTTAAAGCAGCTAATTCTGCGAGTGACGATGAAGCGGATGATGAAGATGTATCCACTGACATCTTCTTTGAACTAAGTTCTTTGCAAATTGCAACTAATTTCTTTTCCGAGGCGAATAAACTCGGCAATGGAGGGTTTGGGCCCGTCTACAAGGCATTGTTCTTGGAAGTTGAAATGTTGAATATCTTCGTTCTGTTTTCTCATTTTCGACTCTGA

Coding sequence (CDS)

ATGAGAAAGTTCAATTCCATACCAACTTCTCATTGCCTCTCTGATTCTGGCGTCAACTTGACCGGTCGGAACTTCCATCCCCGTCAGAACGAGCTCATCGGCGCAATCACCCAAGCTCTGCCTGGCGGCGTTAAAAGACTTAAAGCAGCTAATTCTGCGAGTGACGATGAAGCGGATGATGAAGATGTATCCACTGACATCTTCTTTGAACTAAGTTCTTTGCAAATTGCAACTAATTTCTTTTCCGAGGCGAATAAACTCGGCAATGGAGGGTTTGGGCCCGTCTACAAGGCATTGTTCTTGGAAGTTGAAATGTTGAATATCTTCGTTCTGTTTTCTCATTTTCGACTCTGA

Protein sequence

MRKFNSIPTSHCLSDSGVNLTGRNFHPRQNELIGAITQALPGGVKRLKAANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFLEVEMLNIFVLFSHFRL
BLAST of ClCG04G011060 vs. Swiss-Prot
Match: Y1155_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 1

Query: 56  DEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYK 98
           ++   EDVS   FFE+ +++IATN FS  NKLG GGFGPVYK
Sbjct: 464 NDLKSEDVSGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYK 505

BLAST of ClCG04G011060 vs. Swiss-Prot
Match: SD129_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana GN=SD129 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 1

Query: 51  NSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFLEVEMLNI 109
           N A  +  + +DVS   FFE+ +++ ATN FS +NKLG GGFGPVYK   ++ + + +
Sbjct: 458 NDAWKNGFERQDVSGVNFFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGV 515

BLAST of ClCG04G011060 vs. Swiss-Prot
Match: Y1146_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabidopsis thaliana GN=At1g61460 PE=2 SV=4)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 1

Query: 43  GVKRLKAANSASDD----EADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYK 98
           G  R +  ++AS D    + + +DVS    FE++++Q ATN FS +NKLG GGFG VYK
Sbjct: 412 GFWRYRVKHNASQDAPKYDLEPQDVSGSYLFEMNTIQTATNNFSLSNKLGQGGFGSVYK 470

BLAST of ClCG04G011060 vs. TrEMBL
Match: A0A0A0LVR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042380 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.5e-25
Identity = 71/125 (56.80%), Postives = 79/125 (63.20%), Query Frame = 1

Query: 1   MRKFNSIPTSHC-LSDSGVNLTGRNFHPRQNELIGAITQALPGGVKRLKAANSASDDEAD 60
           +RKF S+P+SH  +S S V  T               T  L GGVK+LK ANSA  DEAD
Sbjct: 36  LRKFKSVPSSHSPISCSAVTTTSS----------AQFTYGLAGGVKKLKPANSAGADEAD 95

Query: 61  DEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFL------------EVEMLN 113
           DEDVSTDIFFEL++LQIATNFFSE NKLGNGGFGPVYK  F+            E  M N
Sbjct: 96  DEDVSTDIFFELNTLQIATNFFSEVNKLGNGGFGPVYKVRFICSGVMNLRRCFWEFGMFN 150

BLAST of ClCG04G011060 vs. TrEMBL
Match: D7SJ08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03510 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.0e-10
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1

Query: 45  KRLKAANSASDDEAD--DEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           +RLK    A DDEAD   +  S D+FF+L +LQ+ATNFFSE N+LG+GGFGPVYK L
Sbjct: 13  RRLKGRGGAGDDEADAASDGDSFDLFFDLRALQVATNFFSEFNELGHGGFGPVYKGL 69

BLAST of ClCG04G011060 vs. TrEMBL
Match: M5WAQ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006449mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.2e-10
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 1

Query: 44  VKRLKA---ANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           ++RLKA   A SA  D ADD   S D+FF+L SLQIAT+FFS+ NKLG+GGFGPVYK L
Sbjct: 11  LERLKAGRGAGSARSDYADDALDSFDLFFDLHSLQIATSFFSDLNKLGHGGFGPVYKGL 69

BLAST of ClCG04G011060 vs. TrEMBL
Match: B9T632_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1198000 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 1

Query: 45  KRLKAANSASD-DEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           KRLK+       D+ADDE  S D+FF+L +LQIATNFFSE N+LG+GGFGPV+K L
Sbjct: 13  KRLKSGRGGGGADDADDEVESHDLFFDLRTLQIATNFFSELNQLGHGGFGPVFKGL 68

BLAST of ClCG04G011060 vs. TrEMBL
Match: A0A061FUX1_THECC (Cysteine-rich RLK 29 isoform 1 OS=Theobroma cacao GN=TCM_012367 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-09
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1

Query: 50  ANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           + SA +D+ADD   +  +FFELS+LQIATNFFSE N LG+GGFGPVYK L
Sbjct: 20  SGSAGEDDADDGPDTHGLFFELSALQIATNFFSELNLLGHGGFGPVYKGL 69

BLAST of ClCG04G011060 vs. TAIR10
Match: AT1G61475.1 (AT1G61475.1 ATP binding;protein kinases)

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 1

Query: 49  AANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFLEV 104
           A+  A  ++   +DVS   FFE++++Q ATN FS +NKLG GGFGPVYK  F  V
Sbjct: 62  ASQVAWRNDLKPQDVSGLNFFEMNTIQNATNNFSISNKLGQGGFGPVYKITFCNV 116

BLAST of ClCG04G011060 vs. TAIR10
Match: AT1G61550.1 (AT1G61550.1 S-locus lectin protein kinase family protein)

HSP 1 Score: 53.9 bits (128), Expect = 7.7e-08
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 1

Query: 56  DEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYK 98
           ++   EDVS   FFE+ +++IATN FS  NKLG GGFGPVYK
Sbjct: 464 NDLKSEDVSGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYK 505

BLAST of ClCG04G011060 vs. TAIR10
Match: AT1G61380.1 (AT1G61380.1 S-domain-1 29)

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 1

Query: 51  NSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFLEVEMLNI 109
           N A  +  + +DVS   FFE+ +++ ATN FS +NKLG GGFGPVYK   ++ + + +
Sbjct: 458 NDAWKNGFERQDVSGVNFFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGV 515

BLAST of ClCG04G011060 vs. TAIR10
Match: AT1G61460.1 (AT1G61460.1 S-locus protein kinase, putative)

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 1

Query: 43  GVKRLKAANSASDD----EADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYK 98
           G  R +  ++AS D    + + +DVS    FE++++Q ATN FS +NKLG GGFG VYK
Sbjct: 261 GFWRYRVKHNASQDAPKYDLEPQDVSGSYLFEMNTIQTATNNFSLSNKLGQGGFGSVYK 319

BLAST of ClCG04G011060 vs. TAIR10
Match: AT1G61480.1 (AT1G61480.1 S-locus lectin protein kinase family protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.5e-07
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1

Query: 49  AANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYK 98
           A+  A +++ + +DVS   FFE++++Q AT+ FS +NKLG GGFG VYK
Sbjct: 464 ASKEAWNNDLEPQDVSGLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYK 512

BLAST of ClCG04G011060 vs. NCBI nr
Match: gi|700209030|gb|KGN64126.1| (hypothetical protein Csa_1G042380 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 6.5e-25
Identity = 71/125 (56.80%), Postives = 79/125 (63.20%), Query Frame = 1

Query: 1   MRKFNSIPTSHC-LSDSGVNLTGRNFHPRQNELIGAITQALPGGVKRLKAANSASDDEAD 60
           +RKF S+P+SH  +S S V  T               T  L GGVK+LK ANSA  DEAD
Sbjct: 36  LRKFKSVPSSHSPISCSAVTTTSS----------AQFTYGLAGGVKKLKPANSAGADEAD 95

Query: 61  DEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKALFL------------EVEMLN 113
           DEDVSTDIFFEL++LQIATNFFSE NKLGNGGFGPVYK  F+            E  M N
Sbjct: 96  DEDVSTDIFFELNTLQIATNFFSEVNKLGNGGFGPVYKVRFICSGVMNLRRCFWEFGMFN 150

BLAST of ClCG04G011060 vs. NCBI nr
Match: gi|659066736|ref|XP_008458735.1| (PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-18
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 1

Query: 45  KRLKAANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           K+LKAANSA  D+ADDEDVSTDIFFEL++LQIATNFFSEANKLGNGGFGPVYK L
Sbjct: 13  KKLKAANSAGADKADDEDVSTDIFFELNTLQIATNFFSEANKLGNGGFGPVYKGL 67

BLAST of ClCG04G011060 vs. NCBI nr
Match: gi|449439411|ref|XP_004137479.1| (PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 1

Query: 45  KRLKAANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           K+LK ANSA  DEADDEDVSTDIFFEL++LQIATNFFSE NKLGNGGFGPVYK L
Sbjct: 16  KKLKPANSAGADEADDEDVSTDIFFELNTLQIATNFFSEVNKLGNGGFGPVYKGL 70

BLAST of ClCG04G011060 vs. NCBI nr
Match: gi|778657257|ref|XP_011650554.1| (PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X2 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 1

Query: 45  KRLKAANSASDDEADDEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           K+LK ANSA  DEADDEDVSTDIFFEL++LQIATNFFSE NKLGNGGFGPVYK L
Sbjct: 16  KKLKPANSAGADEADDEDVSTDIFFELNTLQIATNFFSEVNKLGNGGFGPVYKGL 70

BLAST of ClCG04G011060 vs. NCBI nr
Match: gi|225455972|ref|XP_002278538.1| (PREDICTED: cysteine-rich receptor-like protein kinase 8 [Vitis vinifera])

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1

Query: 45  KRLKAANSASDDEAD--DEDVSTDIFFELSSLQIATNFFSEANKLGNGGFGPVYKAL 100
           +RLK    A DDEAD   +  S D+FF+L +LQ+ATNFFSE N+LG+GGFGPVYK L
Sbjct: 13  RRLKGRGGAGDDEADAASDGDSFDLFFDLRALQVATNFFSEFNELGHGGFGPVYKGL 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y1155_ARATH1.4e-0659.52G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabi... [more]
SD129_ARATH4.0e-0643.10G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidop... [more]
Y1146_ARATH4.0e-0645.76G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabi... [more]
Match NameE-valueIdentityDescription
A0A0A0LVR8_CUCSA4.5e-2556.80Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042380 PE=4 SV=1[more]
D7SJ08_VITVI7.0e-1061.40Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03510 PE=4 SV=... [more]
M5WAQ6_PRUPE9.2e-1064.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006449mg PE=4 SV=1[more]
B9T632_RICCO1.2e-0962.50Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCO... [more]
A0A061FUX1_THECC2.7e-0966.00Cysteine-rich RLK 29 isoform 1 OS=Theobroma cacao GN=TCM_012367 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G61475.15.9e-0850.91 ATP binding;protein kinases[more]
AT1G61550.17.7e-0859.52 S-locus lectin protein kinase family protein[more]
AT1G61380.12.2e-0743.10 S-domain-1 29[more]
AT1G61460.12.2e-0745.76 S-locus protein kinase, putative[more]
AT1G61480.18.5e-0748.98 S-locus lectin protein kinase family protein[more]
Match NameE-valueIdentityDescription
gi|700209030|gb|KGN64126.1|6.5e-2556.80hypothetical protein Csa_1G042380 [Cucumis sativus][more]
gi|659066736|ref|XP_008458735.1|3.5e-1887.27PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1 [Cucumis mel... [more]
gi|449439411|ref|XP_004137479.1|1.3e-1785.45PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1 [Cucumis sat... [more]
gi|778657257|ref|XP_011650554.1|1.3e-1785.45PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X2 [Cucumis sat... [more]
gi|225455972|ref|XP_002278538.1|1.0e-0961.40PREDICTED: cysteine-rich receptor-like protein kinase 8 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000165 MAPK cascade
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0016310 phosphorylation
biological_process GO:0006952 defense response
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G011060.1ClCG04G011060.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011009Protein kinase-like domainunknownSSF56112Protein kinase-like (PK-like)coord: 64..103
score: 2.
NoneNo IPR availableGENE3DG3DSA:3.30.200.20coord: 46..101
score: 1.
NoneNo IPR availablePANTHERPTHR27002FAMILY NOT NAMEDcoord: 53..100
score: 1.4
NoneNo IPR availablePANTHERPTHR27002:SF113SUBFAMILY NOT NAMEDcoord: 53..100
score: 1.4

The following gene(s) are paralogous to this gene:

None