ClCG04G009700 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAACCATCATCCAAAAACAAAGCTCCTGAAGAAGAGGAAGATGGAAATGAGTTGGGATTGTCACTGGAAAAGCTGAATCTTGTCCCAAAAAAGAAGCTTCTGATTATGGGACTCGGTGGATTTCTGTGTCACAGAGTCTGTCGCCGTAAAGGCAGCTCCAAGATCCCAAAACATCGCCGCCCTGATGCTTCCTATGGCAGTTTCCATGGTCTGCAAATGCCTTCCCAATTTTCTTAAGCCTCATTCGTAGTGATTTTGGCCCAAATAGTTCACCATTTAACCCAACACCTGTGGTTTTTAGCTTTTAAATTTTGAAAATTAAACCTATAAACATTTATTTCATTTCTAAAATTATTTGTTTTGTTATTAGTTTTTTATCAATACTTTTAAAAATTATGTTAAAACTAAAAATTAAAAAAAAAAAAAAGTAATTTTTTTAAAAAAAATTTGTTTTAGAAATTTAACCAAACAGTTACAATTTGAGGGATCATATTTTATTTTTTGTTTTTGAAAATTTAAATATTTAGTAAATAACATAAACATTGATACAGACATATAAATCTAGTGTTTATAAGTTTAATTTTATCCATATTTGAATGCCAGTTTATAAGAGGCCATTCTGTGAGGACTTTATGAGGTTCTGCTTGGAGAGGTTCGAAGTTGGAATATGGTCTTCGGCAAGGGAGTTAGTCTCAAATTAAAACAAAACCGTTTACAAGTAATTAAACATTTTAATCAATTAATTTATTAATATTTCCTATGTACAAATGAATGCAGATGCTACTTGTACAATGCTTTGGATTGTATAACGCCAGGATTGAGAAGGAAGCTTGTGTTTGCATGGGTATTTATGTTATCAATAATGATATTTTGGGTCGTGAAATTGGTGGCATTTCAAGAATATTTTTTTGGGCTTTTACAATGCATGGATTTTTACAGGACCAGACAGAGTGCACTAGGACCTGTTTCTTTGACTTGAAGAATAAGGACAAACCCATTTTTATTAAGGAGTTGAAGAAAGTATGGGAAGGAACTGATGTTGGGCTTTTAAGGCTTCCAACACAATTTTCTTCATCCAATACATTGTTAATTGACAATGAGCCTTACAAAGCTCTCTTGAACCCTGTAAGATTTCAACTAAACTATCCTTGAATTTTGTCACTTGTTTCATCCAAATTTCTATTACTTAAATTTTGAAACCTAGACTTTACCTCACATCTTGGATCAACGTAGACTTAAAGAAATTGAGTTGAAACAAACCTAGTTCAGAAAAATTATACGGTTTCCATGACGTTTAATTGTATATTCAATTGCCTCAAATAAAGAGGGTAAGTAACAACTCCCTCTCCTTTTGTTGAACTTGGCCTTGGAAGTTTAAATGGAAATTGGGATTTGTACGATACCATGGTTATGTGTCTGAGACTTCAATTTAAAAAAAAATATTTAGGTGTTACTTAGACTATATCTATCTTTTTCTAGCTTAATTGTAGTTCAATTAAAAACAACCTAGTAGACATTTTTTAAGAAGTCAAATTATTATTCTCTTGCCATGTAAATGAAGGGGTTGTAGGGTTGAAAAATCTAGTAGTACATTAGTACATGCTACCATTGTTCATTATTTGACCTGTCATTTATGTTATAATAATTTATTGTTTATTTATTTTTTTGAATTCTACATAATTCTTAAATTCTTTTGTGACAAAAAATGAAAGTAGTATAGAAAATTTTTTATTAATACAAGAAACTTTCTTGGTTGTAGGGAGATATATATAACCAAGGCTACACCTAATCATTTCCATGAATGATCTTAGTTGTTGTCGTACTTTCTCTTTTCTTCTCCTCATTTTTAACTATGTTTCTTATGAATTTGTACAGAGTTCATGGTGTTGAACAATGAATGACTAATATCATATTTATGCGTTGTTTGTTGATTTATGCAGCCTAACACTGCCATATTCCCAAACGAGTACATGGTAGATGATGTTAACGACAGTGGTTTAGGAGTTGGAAGTGAACTGAGATTGTACCTTGAAAAAGTGGCCGAGGCAGAGGAAGTTCCTGGATTCATCAAAAACCATCCATTTGGAAAACCCCCCATTTCTCCACAACAACCTAATTGGGACTTCTATTCCATAATCATTAGAAAATATGGGTTATAA ATGGCAGAACCATCATCCAAAAACAAAGCTCCTGAAGAAGAGGAAGATGGAAATGAGTTGGGATTGTCACTGGAAAAGCTGAATCTTGTCCCAAAAAAGAAGCTTCTGATTATGGGACTCGGTGGATTTCTGTGTCACAGAGTCTGTCGCCGTAAAGGCAGCTCCAAGATCCCAAAACATCGCCGCCCTGATGCTTCCTATGGCAGTTTCCATGTTTATAAGAGGCCATTCTGTGAGGACTTTATGAGGTTCTGCTTGGAGAGGTTCGAAGTTGGAATATGGTCTTCGGCAAGGGAATGCTACTTGTACAATGCTTTGGATTGTATAACGCCAGGATTGAGAAGGAAGCTTGTGTTTGCATGGGACCAGACAGAGTGCACTAGGACCTGTTTCTTTGACTTGAAGAATAAGGACAAACCCATTTTTATTAAGGAGTTGAAGAAAGTATGGGAAGGAACTGATGTTGGGCTTTTAAGGCTTCCAACACAATTTTCTTCATCCAATACATTGTTAATTGACAATGAGCCTTACAAAGCTCTCTTGAACCCTCCTAACACTGCCATATTCCCAAACGAGTACATGGTAGATGATGTTAACGACAGTGGTTTAGGAGTTGGAAGTGAACTGAGATTGTACCTTGAAAAAGTGGCCGAGGCAGAGGAAGTTCCTGGATTCATCAAAAACCATCCATTTGGAAAACCCCCCATTTCTCCACAACAACCTAATTGGGACTTCTATTCCATAATCATTAGAAAATATGGGTTATAA ATGGCAGAACCATCATCCAAAAACAAAGCTCCTGAAGAAGAGGAAGATGGAAATGAGTTGGGATTGTCACTGGAAAAGCTGAATCTTGTCCCAAAAAAGAAGCTTCTGATTATGGGACTCGGTGGATTTCTGTGTCACAGAGTCTGTCGCCGTAAAGGCAGCTCCAAGATCCCAAAACATCGCCGCCCTGATGCTTCCTATGGCAGTTTCCATGTTTATAAGAGGCCATTCTGTGAGGACTTTATGAGGTTCTGCTTGGAGAGGTTCGAAGTTGGAATATGGTCTTCGGCAAGGGAATGCTACTTGTACAATGCTTTGGATTGTATAACGCCAGGATTGAGAAGGAAGCTTGTGTTTGCATGGGACCAGACAGAGTGCACTAGGACCTGTTTCTTTGACTTGAAGAATAAGGACAAACCCATTTTTATTAAGGAGTTGAAGAAAGTATGGGAAGGAACTGATGTTGGGCTTTTAAGGCTTCCAACACAATTTTCTTCATCCAATACATTGTTAATTGACAATGAGCCTTACAAAGCTCTCTTGAACCCTCCTAACACTGCCATATTCCCAAACGAGTACATGGTAGATGATGTTAACGACAGTGGTTTAGGAGTTGGAAGTGAACTGAGATTGTACCTTGAAAAAGTGGCCGAGGCAGAGGAAGTTCCTGGATTCATCAAAAACCATCCATTTGGAAAACCCCCCATTTCTCCACAACAACCTAATTGGGACTTCTATTCCATAATCATTAGAAAATATGGGTTATAA MAEPSSKNKAPEEEEDGNELGLSLEKLNLVPKKKLLIMGLGGFLCHRVCRRKGSSKIPKHRRPDASYGSFHVYKRPFCEDFMRFCLERFEVGIWSSARECYLYNALDCITPGLRRKLVFAWDQTECTRTCFFDLKNKDKPIFIKELKKVWEGTDVGLLRLPTQFSSSNTLLIDNEPYKALLNPPNTAIFPNEYMVDDVNDSGLGVGSELRLYLEKVAEAEEVPGFIKNHPFGKPPISPQQPNWDFYSIIIRKYGL
BLAST of ClCG04G009700 vs. TrEMBL
Match: A0A0A0KHD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G449850 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 2.8e-104 Identity = 191/263 (72.62%), Postives = 213/263 (80.99%), Query Frame = 1
BLAST of ClCG04G009700 vs. TrEMBL
Match: W9SL98_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012800 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.8e-77 Identity = 144/252 (57.14%), Postives = 186/252 (73.81%), Query Frame = 1
BLAST of ClCG04G009700 vs. TrEMBL
Match: M5VU27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023382mg PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.9e-76 Identity = 146/240 (60.83%), Postives = 181/240 (75.42%), Query Frame = 1
BLAST of ClCG04G009700 vs. TrEMBL
Match: W9SB01_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012801 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 9.4e-76 Identity = 137/245 (55.92%), Postives = 178/245 (72.65%), Query Frame = 1
BLAST of ClCG04G009700 vs. TrEMBL
Match: A9PGJ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s25050g PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 3.6e-75 Identity = 143/245 (58.37%), Postives = 184/245 (75.10%), Query Frame = 1
BLAST of ClCG04G009700 vs. TAIR10
Match: AT2G36540.1 (AT2G36540.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 188.3 bits (477), Expect = 5.7e-48 Identity = 108/235 (45.96%), Postives = 141/235 (60.00%), Query Frame = 1
BLAST of ClCG04G009700 vs. TAIR10
Match: AT4G26190.1 (AT4G26190.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 158.3 bits (399), Expect = 6.3e-39 Identity = 85/215 (39.53%), Postives = 120/215 (55.81%), Query Frame = 1
BLAST of ClCG04G009700 vs. TAIR10
Match: AT3G29760.1 (AT3G29760.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 117.9 bits (294), Expect = 9.4e-27 Identity = 61/161 (37.89%), Postives = 93/161 (57.76%), Query Frame = 1
BLAST of ClCG04G009700 vs. TAIR10
Match: AT2G36550.1 (AT2G36550.1 NLI interacting factor (InterPro:IPR004274)) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22 Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 1
BLAST of ClCG04G009700 vs. NCBI nr
Match: gi|778717360|ref|XP_004143298.2| (PREDICTED: uncharacterized protein LOC101207591 [Cucumis sativus]) HSP 1 Score: 386.3 bits (991), Expect = 4.0e-104 Identity = 191/263 (72.62%), Postives = 213/263 (80.99%), Query Frame = 1
BLAST of ClCG04G009700 vs. NCBI nr
Match: gi|659125138|ref|XP_008462528.1| (PREDICTED: uncharacterized protein LOC103500865 [Cucumis melo]) HSP 1 Score: 376.7 bits (966), Expect = 3.2e-101 Identity = 180/250 (72.00%), Postives = 207/250 (82.80%), Query Frame = 1
BLAST of ClCG04G009700 vs. NCBI nr
Match: gi|703160420|ref|XP_010112522.1| (hypothetical protein L484_012800 [Morus notabilis]) HSP 1 Score: 296.2 bits (757), Expect = 5.5e-77 Identity = 144/252 (57.14%), Postives = 186/252 (73.81%), Query Frame = 1
BLAST of ClCG04G009700 vs. NCBI nr
Match: gi|595814153|ref|XP_007203693.1| (hypothetical protein PRUPE_ppa023382mg [Prunus persica]) HSP 1 Score: 293.9 bits (751), Expect = 2.7e-76 Identity = 146/240 (60.83%), Postives = 181/240 (75.42%), Query Frame = 1
BLAST of ClCG04G009700 vs. NCBI nr
Match: gi|743832898|ref|XP_011024399.1| (PREDICTED: uncharacterized protein LOC105125581 [Populus euphratica]) HSP 1 Score: 292.0 bits (746), Expect = 1.0e-75 Identity = 146/244 (59.84%), Postives = 182/244 (74.59%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |