ClCG04G007930 (gene) Watermelon (Charleston Gray)

NameClCG04G007930
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLegume-specific protein
LocationCG_Chr04 : 22876142 .. 22878830 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCGTTTGCTTTCCAATCGAGTTGCTGCTTGAAAGGAACAATATTGAAGTTTTTTTTTTATTTTTTTATTTTTTTTATTTTTTAAAATAGTTATGTTGATGGTTTTAATTATTTGTTGTGGTTGTGTCTTGGTTTTGGAAGTAATTAAAAGGGTTGTGAATGTGTGAAGAAAGAGACCTCCAAAGGGAGAATTGTGTTTGTGTGTAGCCTAAAAATGGAGTGTGTTGTCAATTGTTAATATATAGTGTGTGGTTGTGATTAATATAATTAATTGTTAATGAAAGTTTGATTTGATCTCTCAAAAGTTGTAAAGCCCAAAAGGGCAAAACGGGCATGTGTGCTGAAAAATATTCAAACAGTTGGTATTTTGAATTCTAAAATGAAAACTGTCAAACTTTTTTAAAATAGTGGTAATTGATCTTTTGTTGACATGATTATGGATGAGGGAAGTTACAGATTTACCCTTCCTTTTCTTTTTTTTCTTTTCTTTCCTTCTTCTTCTCTTCTCTTCTCTAGCGAGCAACCATATTAGATCTATCAAACACGAACTTGAGCATGCTGGTAGCGAGCACCCAAATGTTGGATAGCGAGACTAGGAGAGAGCAAGAGGGAGGAGAGTGATCCGTTTGAGAGGAGAATGATTTGTGAGAGAGGAGAGCAGTCTGTGAGAGAAGGAAAGGGAACGATAGAGAGAGAAGAGCGAAAGAACGAACATCGAGATTGGTCATTCTACGTGCGCGCGAGGGTTTCATTTTGTAATTTCACCTAGTGTCGATGTTAGCAAAGGGTAAAAAAACCTTCATTTTAAAAAAAGCCAGGAAATTTGTTTTTCCCTCTCAATTTGGATCATCCGTACTAAAACCCTACGTGTATTGGTGGTTACTTAAAAAAAAAAAAACATTTTTTTTGAGGTAAGTATTTTTGTTATGTTATGAAAATCCACTAGAAGCAACCAACCGTATTGTCTGCACCAACTACCATTTAGCTAATAAGCTCGTGAATATCGAGGTTCCACAAGTAGTACTTTTTGATACTGTATTTGAAGCATTGTTCGAATTCTTTATAATATGTAACTTAAACAAGTTATTGCAAATGGTAAAAAGGGCCGTTTTGAATGTGGGGCTGTTTGAATTAGCCCTTCCATCGTATTTCTCCTGAAATTAAAGAAAAGATGGACAAAAACTTATGTTTAAGCTAAATTAACCGGAGTTGCTTGTTTGGATTTAACTTAATATCTTAAATCCACGATTTAAGATTGGTTACTAAATAATAGTTATAATAATTTCCATTTCCATTTTTCTTACTTTTAAGTTTAAAGTGTCTACCTATTTAAGTCCGGTAAAATATATAAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAATACTTGTAAAAAGAAATAACCACTTTTGGGTGGAATGCTAAATTAATTTTCTTTTTCATCTCATTTACTTGTTCAATGATTGTCTTCAACTTATATGATTCTGAAGATTGCTTACTAGTAATTGATCACATTATATTTTTTCCTTTCATTAAAGGTCCGTTCACACTTTTATTGTACAAGAAATAAAAATCATCTTCATAATTAGCATTTAGTAGTAAGATCCACATACTCAAAACCTATACCATTAATTTGTTAAAAACATGATAAAAGTATAAACTAAAATGATTATTTTTTACAACTTCGAGAACTAAAATAGATATTTTAAATGTTTTGGAGTTAATTTAGAACAAATCTGATACTTCAAAGGCCAAAATAAACATTTTAAATGTTTAGAAACCAAATCAGAACATACTTGAAAATTTTAGAGGCTAAAATATATGAGATCTAAACCCTTTTCTCTTAAATACAATAAATGTGTGCAAAAGGATTTTTTTTTTCTTTTTTTTTTTTTAAAGATCACAATGAAATTTGGATACATTAAAAAAATAATAGTTAAACATCAACTTTTGAAATAGTAATATAAAGAGAGATGAGAAATCAAGCGAGGTAGGTAGAAAAAAAAGAGATTCAAGCAACGAACTACATAGTACGAGATTGAACATTGACCTAAAAGATGTAATAAAAAAAGGTTGGTATTCAACCAGATTTTGAAGAAATTTAATTCGTAGAATTTGAAATTTGCATTTCTATTAATTTCAATACAATATATTGAATACAATCTCTAATAAATGGTCCTTTGATGCTTTCTATCGAAAAGTAAACTTTAATCATTGCGCTTGTTGATCTTTTTGAATGATCAACCTTTGGACTTGATGATTTTTTTGGATGATAAGACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG

mRNA sequence

ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG

Coding sequence (CDS)

ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG

Protein sequence

MEGLIPFLYKAILQYRNGNNETSSWCCDESSSSSSSSEALYVRLAGDDQDYIINNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCHFGLVDLLGSSTFRLDDFSGGLVFRLDDLLGSASDLLIALGQLLACQLP
BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0A0L2A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296290 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-23
Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 1   MEGLIPFLYKAILQYRNGNNETSS---------WCCDESS----SSSSSSEALYVRLAGD 60
           MEGLIPFLYKAILQY+NGN+ET++         W CD       SSSSSSEALYVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  DQDYI----INNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCH 90
           DQDYI     NN PF SSSSSSS+ N + SVIIS+ NSGIQSPLCH
Sbjct: 61  DQDYINTNTNNNLPF-SSSSSSSTFNDTKSVIISS-NSGIQSPLCH 104

BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A151THI9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012816 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNG-NNETSSWCCDESSSSSSSSEALYVRLAGDDQDYIINNPPFS 60
          MEGLIPF+YKAI+QY++G      SW CD  S S       Y+RL GD   + I  P FS
Sbjct: 1  MEGLIPFVYKAIMQYKSGKEGPIGSWICDSPSYS-------YMRLPGDSGRFQIQAPSFS 60

Query: 61 SSSSSSSSSNGSSSVIISTDNSGIQSP 87
          + S+S SS+N +++ II   +S +QSP
Sbjct: 61 APSASPSSNNHATTQIIV--SSSVQSP 78

BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0L9VTE1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g124200 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-08
Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNG-NNETSSWCCDESSSSSSSSEALYVRLAGDDQDY------II 60
          MEGLIPF+YKAI+QY+NG      SW CD SS S       Y++L GD   +      + 
Sbjct: 1  MEGLIPFVYKAIMQYKNGRQGPIVSWLCDSSSYS-------YMKLPGDSGRFQTSASSLF 60

Query: 61 NNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCH 90
           +    SS+SSSSSS   SS      +S +QSP CH
Sbjct: 61 GSEYVLSSTSSSSSSKPGSSTTQIMFSSSVQSPSCH 89

BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0S3SWE1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G055500 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-08
Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNG-NNETSSWCCDESSSSSSSSEALYVRLAGDDQDY------II 60
          MEGLIPF+YKAI+QY+NG      SW CD SS S       Y++L GD   +      + 
Sbjct: 1  MEGLIPFVYKAIMQYKNGRQGPIVSWLCDSSSYS-------YMKLPGDSGRFQTSASSLF 60

Query: 61 NNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCH 90
           +    SS+SSSSSS   SS      +S +QSP CH
Sbjct: 61 GSEYVLSSTSSSSSSKPGSSTTQIMFSSSVQSPSCH 89

BLAST of ClCG04G007930 vs. TrEMBL
Match: S5VRI4_9FABA (Legume-specific protein OS=Aeschynomene sensitiva PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-08
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNGN-NETSSWCCDESSSSSSSSEALYVRLAGDD---QDYIINNP 60
          MEGLIPF+YKAI+QY+NGN     +W C+  S S       YVRL GD    Q     + 
Sbjct: 1  MEGLIPFVYKAIMQYKNGNEGAIGTWICESPSYS-------YVRLPGDSGRFQTPASCSA 60

Query: 61 PFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCHFGL 93
             SS+S+SSSS+ S+ V++S   SG+QSP  H GL
Sbjct: 61 STPSSNSASSSSSSSAQVLVS---SGVQSP--HQGL 84

BLAST of ClCG04G007930 vs. TAIR10
Match: AT2G37750.1 (AT2G37750.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNGNNETSSWCCDESSSSSSSSEALYVRLAGDDQDYIINNPPFSS 60
          MEGLIP +YKA++Q R GN         ES   SSS    YVRL GD   ++ ++   S 
Sbjct: 1  MEGLIPLVYKAVMQIRYGN---------ESQQLSSS---YYVRLPGDSGRFVRSDLDVSG 60

Query: 61 -SSSSSSSSNGSSSVIISTDNSGIQSPL 88
            S+SS+ ++ S+S       +G+QSP+
Sbjct: 61 PGSNSSNRASSSTSTTTFAVYAGVQSPV 76

BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|659069115|ref|XP_008448219.1| (PREDICTED: uncharacterized G-patch domain protein DDB_G0278987 [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-25
Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 1

Query: 1   MEGLIPFLYKAILQYRNGNNETSS---------WCCD---ESSSSSSSSEALYVRLAGDD 60
           MEGLIPFLYKAILQY+NGNNET++         W CD   +SSSSSSSSEALYVRLAGDD
Sbjct: 1   MEGLIPFLYKAILQYKNGNNETNNDNMNQPSSYWWCDADHQSSSSSSSSEALYVRLAGDD 60

Query: 61  QDYI--------INNPPFSSSSSSSSSS-NGSSSVIISTDNSGIQSPLCH 90
           QDYI         NN PF SSSSSSSS+ N + SVIIS+ NSGIQSPLCH
Sbjct: 61  QDYINSNTNAKNKNNLPFPSSSSSSSSTFNDTKSVIISS-NSGIQSPLCH 109

BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|700199118|gb|KGN54276.1| (hypothetical protein Csa_4G296290 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 1   MEGLIPFLYKAILQYRNGNNETSS---------WCCDESS----SSSSSSEALYVRLAGD 60
           MEGLIPFLYKAILQY+NGN+ET++         W CD       SSSSSSEALYVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  DQDYI----INNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCH 90
           DQDYI     NN PF SSSSSSS+ N + SVIIS+ NSGIQSPLCH
Sbjct: 61  DQDYINTNTNNNLPF-SSSSSSSTFNDTKSVIISS-NSGIQSPLCH 104

BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|1012355333|gb|KYP66520.1| (hypothetical protein KK1_012816 [Cajanus cajan])

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 1

Query: 1  MEGLIPFLYKAILQYRNG-NNETSSWCCDESSSSSSSSEALYVRLAGDDQDYIINNPPFS 60
          MEGLIPF+YKAI+QY++G      SW CD  S S       Y+RL GD   + I  P FS
Sbjct: 1  MEGLIPFVYKAIMQYKSGKEGPIGSWICDSPSYS-------YMRLPGDSGRFQIQAPSFS 60

Query: 61 SSSSSSSSSNGSSSVIISTDNSGIQSP 87
          + S+S SS+N +++ II   +S +QSP
Sbjct: 61 APSASPSSNNHATTQIIV--SSSVQSP 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L2A8_CUCSA3.8e-2366.98Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296290 PE=4 SV=1[more]
A0A151THI9_CAJCA1.2e-0845.98Uncharacterized protein OS=Cajanus cajan GN=KK1_012816 PE=4 SV=1[more]
A0A0L9VTE1_PHAAN2.0e-0843.75Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g124200 PE=4 SV=1[more]
A0A0S3SWE1_PHAAN2.0e-0843.75Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G055500 PE=... [more]
S5VRI4_9FABA2.6e-0846.88Legume-specific protein OS=Aeschynomene sensitiva PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37750.11.7e-0638.64 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659069115|ref|XP_008448219.1|3.4e-2568.18PREDICTED: uncharacterized G-patch domain protein DDB_G0278987 [Cucumis melo][more]
gi|700199118|gb|KGN54276.1|5.4e-2366.98hypothetical protein Csa_4G296290 [Cucumis sativus][more]
gi|1012355333|gb|KYP66520.1|1.7e-0845.98hypothetical protein KK1_012816 [Cajanus cajan][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G007930.1ClCG04G007930.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670FAMILY NOT NAMEDcoord: 1..87
score: 1.2

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG04G007930Cucurbita pepo (Zucchini)cpewcgB078
ClCG04G007930Cucurbita pepo (Zucchini)cpewcgB382
ClCG04G007930Cucurbita pepo (Zucchini)cpewcgB432
ClCG04G007930Cucurbita pepo (Zucchini)cpewcgB553
ClCG04G007930Bottle gourd (USVL1VR-Ls)lsiwcgB142
ClCG04G007930Bottle gourd (USVL1VR-Ls)lsiwcgB240
ClCG04G007930Bottle gourd (USVL1VR-Ls)lsiwcgB241
ClCG04G007930Bottle gourd (USVL1VR-Ls)lsiwcgB282
ClCG04G007930Cucumber (Gy14) v2cgybwcgB202
ClCG04G007930Cucumber (Gy14) v2cgybwcgB282
ClCG04G007930Cucumber (Gy14) v2cgybwcgB429
ClCG04G007930Melon (DHL92) v3.6.1medwcgB060
ClCG04G007930Melon (DHL92) v3.6.1medwcgB324
ClCG04G007930Silver-seed gourdcarwcgB0025
ClCG04G007930Silver-seed gourdcarwcgB0089
ClCG04G007930Silver-seed gourdcarwcgB0975
ClCG04G007930Cucumber (Chinese Long) v3cucwcgB224
ClCG04G007930Cucumber (Chinese Long) v3cucwcgB408
ClCG04G007930Watermelon (97103) v2wcgwmbB195
ClCG04G007930Watermelon (97103) v2wcgwmbB196
ClCG04G007930Watermelon (97103) v2wcgwmbB203
ClCG04G007930Wax gourdwcgwgoB390
ClCG04G007930Wax gourdwcgwgoB380
ClCG04G007930Watermelon (Charleston Gray)wcgwcgB051
ClCG04G007930Watermelon (Charleston Gray)wcgwcgB067
ClCG04G007930Watermelon (Charleston Gray)wcgwcgB150
ClCG04G007930Cucumber (Gy14) v1cgywcgB065
ClCG04G007930Cucumber (Gy14) v1cgywcgB226
ClCG04G007930Cucumber (Gy14) v1cgywcgB293
ClCG04G007930Cucumber (Gy14) v1cgywcgB316
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB230
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB585
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB649
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB651
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB736
ClCG04G007930Cucurbita maxima (Rimu)cmawcgB768
ClCG04G007930Cucurbita moschata (Rifu)cmowcgB214
ClCG04G007930Cucurbita moschata (Rifu)cmowcgB584
ClCG04G007930Cucurbita moschata (Rifu)cmowcgB650
ClCG04G007930Cucurbita moschata (Rifu)cmowcgB742
ClCG04G007930Wild cucumber (PI 183967)cpiwcgB224
ClCG04G007930Wild cucumber (PI 183967)cpiwcgB404
ClCG04G007930Wild cucumber (PI 183967)cpiwcgB491
ClCG04G007930Cucumber (Chinese Long) v2cuwcgB220
ClCG04G007930Cucumber (Chinese Long) v2cuwcgB387
ClCG04G007930Cucumber (Chinese Long) v2cuwcgB467
ClCG04G007930Melon (DHL92) v3.5.1mewcgB061
ClCG04G007930Melon (DHL92) v3.5.1mewcgB285
ClCG04G007930Melon (DHL92) v3.5.1mewcgB330
ClCG04G007930Watermelon (97103) v1wcgwmB251
ClCG04G007930Watermelon (97103) v1wcgwmB253
ClCG04G007930Watermelon (97103) v1wcgwmB266