ClCG04G007930 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCGTTTGCTTTCCAATCGAGTTGCTGCTTGAAAGGAACAATATTGAAGTTTTTTTTTTATTTTTTTATTTTTTTTATTTTTTAAAATAGTTATGTTGATGGTTTTAATTATTTGTTGTGGTTGTGTCTTGGTTTTGGAAGTAATTAAAAGGGTTGTGAATGTGTGAAGAAAGAGACCTCCAAAGGGAGAATTGTGTTTGTGTGTAGCCTAAAAATGGAGTGTGTTGTCAATTGTTAATATATAGTGTGTGGTTGTGATTAATATAATTAATTGTTAATGAAAGTTTGATTTGATCTCTCAAAAGTTGTAAAGCCCAAAAGGGCAAAACGGGCATGTGTGCTGAAAAATATTCAAACAGTTGGTATTTTGAATTCTAAAATGAAAACTGTCAAACTTTTTTAAAATAGTGGTAATTGATCTTTTGTTGACATGATTATGGATGAGGGAAGTTACAGATTTACCCTTCCTTTTCTTTTTTTTCTTTTCTTTCCTTCTTCTTCTCTTCTCTTCTCTAGCGAGCAACCATATTAGATCTATCAAACACGAACTTGAGCATGCTGGTAGCGAGCACCCAAATGTTGGATAGCGAGACTAGGAGAGAGCAAGAGGGAGGAGAGTGATCCGTTTGAGAGGAGAATGATTTGTGAGAGAGGAGAGCAGTCTGTGAGAGAAGGAAAGGGAACGATAGAGAGAGAAGAGCGAAAGAACGAACATCGAGATTGGTCATTCTACGTGCGCGCGAGGGTTTCATTTTGTAATTTCACCTAGTGTCGATGTTAGCAAAGGGTAAAAAAACCTTCATTTTAAAAAAAGCCAGGAAATTTGTTTTTCCCTCTCAATTTGGATCATCCGTACTAAAACCCTACGTGTATTGGTGGTTACTTAAAAAAAAAAAAACATTTTTTTTGAGGTAAGTATTTTTGTTATGTTATGAAAATCCACTAGAAGCAACCAACCGTATTGTCTGCACCAACTACCATTTAGCTAATAAGCTCGTGAATATCGAGGTTCCACAAGTAGTACTTTTTGATACTGTATTTGAAGCATTGTTCGAATTCTTTATAATATGTAACTTAAACAAGTTATTGCAAATGGTAAAAAGGGCCGTTTTGAATGTGGGGCTGTTTGAATTAGCCCTTCCATCGTATTTCTCCTGAAATTAAAGAAAAGATGGACAAAAACTTATGTTTAAGCTAAATTAACCGGAGTTGCTTGTTTGGATTTAACTTAATATCTTAAATCCACGATTTAAGATTGGTTACTAAATAATAGTTATAATAATTTCCATTTCCATTTTTCTTACTTTTAAGTTTAAAGTGTCTACCTATTTAAGTCCGGTAAAATATATAAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAATACTTGTAAAAAGAAATAACCACTTTTGGGTGGAATGCTAAATTAATTTTCTTTTTCATCTCATTTACTTGTTCAATGATTGTCTTCAACTTATATGATTCTGAAGATTGCTTACTAGTAATTGATCACATTATATTTTTTCCTTTCATTAAAGGTCCGTTCACACTTTTATTGTACAAGAAATAAAAATCATCTTCATAATTAGCATTTAGTAGTAAGATCCACATACTCAAAACCTATACCATTAATTTGTTAAAAACATGATAAAAGTATAAACTAAAATGATTATTTTTTACAACTTCGAGAACTAAAATAGATATTTTAAATGTTTTGGAGTTAATTTAGAACAAATCTGATACTTCAAAGGCCAAAATAAACATTTTAAATGTTTAGAAACCAAATCAGAACATACTTGAAAATTTTAGAGGCTAAAATATATGAGATCTAAACCCTTTTCTCTTAAATACAATAAATGTGTGCAAAAGGATTTTTTTTTTCTTTTTTTTTTTTTAAAGATCACAATGAAATTTGGATACATTAAAAAAATAATAGTTAAACATCAACTTTTGAAATAGTAATATAAAGAGAGATGAGAAATCAAGCGAGGTAGGTAGAAAAAAAAGAGATTCAAGCAACGAACTACATAGTACGAGATTGAACATTGACCTAAAAGATGTAATAAAAAAAGGTTGGTATTCAACCAGATTTTGAAGAAATTTAATTCGTAGAATTTGAAATTTGCATTTCTATTAATTTCAATACAATATATTGAATACAATCTCTAATAAATGGTCCTTTGATGCTTTCTATCGAAAAGTAAACTTTAATCATTGCGCTTGTTGATCTTTTTGAATGATCAACCTTTGGACTTGATGATTTTTTTGGATGATAAGACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG ATGGAGGGTCTGATTCCATTCCTTTACAAAGCTATTTTACAGTATAGAAATGGCAATAATGAAACTTCTTCATGGTGTTGTGATGAGTCTTCTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGACTACATCATTAATAATCCTCCATTTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCAAATGGCAGCAGCAGTGTCATCATATCAACTGATAATTCTGGGATTCAATCTCCTCTCTGTCACTTTGGGCTTGTTGATCTTCTTGGATCATCAACTTTTAGACTTGATGATTTTTCTGGAGGATTGGTTTTTAGGCTTGATGATCTTCTTGGTTCAGCTTCTGACTTGTTAATTGCCTTGGGTCAGCTTCTAGCTTGTCAATTGCCTTAG MEGLIPFLYKAILQYRNGNNETSSWCCDESSSSSSSSEALYVRLAGDDQDYIINNPPFSSSSSSSSSSNGSSSVIISTDNSGIQSPLCHFGLVDLLGSSTFRLDDFSGGLVFRLDDLLGSASDLLIALGQLLACQLP
BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0A0L2A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296290 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.8e-23 Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A151THI9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012816 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08 Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 1
BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0L9VTE1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g124200 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.0e-08 Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 1
BLAST of ClCG04G007930 vs. TrEMBL
Match: A0A0S3SWE1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G055500 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.0e-08 Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 1
BLAST of ClCG04G007930 vs. TrEMBL
Match: S5VRI4_9FABA (Legume-specific protein OS=Aeschynomene sensitiva PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.6e-08 Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of ClCG04G007930 vs. TAIR10
Match: AT2G37750.1 (AT2G37750.1 unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06 Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 1
BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|659069115|ref|XP_008448219.1| (PREDICTED: uncharacterized G-patch domain protein DDB_G0278987 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 3.4e-25 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 1
BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|700199118|gb|KGN54276.1| (hypothetical protein Csa_4G296290 [Cucumis sativus]) HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23 Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of ClCG04G007930 vs. NCBI nr
Match: gi|1012355333|gb|KYP66520.1| (hypothetical protein KK1_012816 [Cajanus cajan]) HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08 Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |