ClCG04G004900 (gene) Watermelon (Charleston Gray)

NameClCG04G004900
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr04 : 18396005 .. 18396962 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCGCCCTCTCAACACTCATGCATCCGTACCTCACTTCACCATGTCTCTTCTACTCAGACCATAGTAATTTCGACCCCTACGATAGATGAGGGATCCAGGTTGTCCACCCTTCATCCTTTTGATTTCAACAGTCCCTACGAATTTGAGAGTGACGAGGCGGCGTTCCTAACTAGGGCTATGGCCCAATGGTCATGTGTGAGCGACAAAGTGCCAACCAAATGGCATGCTGAACCAAGATGGGGTATTGCACAAGCTTAACAGAACATCCGAATGGTAAGGGACATCTTTTTTAATCTTGACTGAACATAGGGTCATACCCGTCTTCTTTTTCTAGGCATCGTATGAGATGCTGATGTCTTGCCGGCAACGAACTAGAATATCATAAGCAGAATCATGCAAGACTGCATGAGGAAATAGAACTTCTCAGGCTGAATTCTGTCCCTCGGAGAGAATTTAATCGAGTTTCATCCTTATATGCTGAGGCGTCCAGCAAACTTACCTGCTCTCAAGAATCCCTGGTGGCACTCCAATCTCAACACGATGCCTCGATCAGGGAATTAAAAGAGAGACTTTCTACTACTGAGAAAAATTTACAAGAGGCCCAAAACAAACTATCAGATGCCAAATATTTGGCTGAAAGCTTCAAAACAACAGAAGCCTACTGCCAAATGGAGGATGACTGCCTTCAATATGGGGTTACGTTGGTTGTTAGCATCATAAAAGCAAAATATCCCAATGTGAACTACAACTTTGTCCAATCCTAGGTTAATGCTTGGTGAGATGATGAGAATTGTAGCCTTGATAGCGTGGGTGTCTTTGCTGACCAACTGTTGCCAATTGCTCCTCAGCGTGGCCTCTCAAATTTTTTTGATACATTCCTCCAAGGTGTTCCTGATTTTGCTAACCTGAGAATCTTGGCGAAACTCGTTGACATTGGGCATATAGATGACTAA

mRNA sequence

ATGAACCGCCCTCTCAACACTCATGCATCCACCATAGTAATTTCGACCCCTACGATAGATGAGGGATCCAGGTTGTCCACCCTTCATCCTTTTGATTTCAACAGTCCCTACGAATTTGAGAGTGACGAGGCGGCGTTCCTAACTAGGGCTATGGCCCAATGGTCATGTGTGAGCGACAAAGTGCCAACCAAATGGCATGCTGAACCAAGATGGGAATATCATAAGCAGAATCATGCAAGACTGCATGAGGAAATAGAACTTCTCAGGCTGAATTCTGTCCCTCGGAGAGAATTTAATCGAGTTTCATCCTTATATGCTGAGGCGTCCAGCAAACTTACCTGCTCTCAAGAATCCCTGGTGGCACTCCAATCTCAACACGATGCCTCGATCAGGGAATTAAAAGAGAGACTTTCTACTACTGAGAAAAATTTACAAGAGGCCCAAAACAAACTATCAGATGCCAAATATTTGGCTGAAAGCTTCAAAACAACAGAAGCCTACTGCCAAATGGAGGATGACTGCCTTCAATATGGGGTTACGTTGGTTGTTAGCATCATAAAAGCAAAATATCCCAATAATTGTAGCCTTGATAGCGTGGGTGTCTTTGCTGACCAACTGTTGCCAATTGCTCCTCAGCGTGGCCTCTCAAATTTTTTTGATACATTCCTCCAAGGTGTTCCTGATTTTGCTAACCTGAGAATCTTGGCGAAACTCGTTGACATTGGGCATATAGATGACTAA

Coding sequence (CDS)

ATGAACCGCCCTCTCAACACTCATGCATCCACCATAGTAATTTCGACCCCTACGATAGATGAGGGATCCAGGTTGTCCACCCTTCATCCTTTTGATTTCAACAGTCCCTACGAATTTGAGAGTGACGAGGCGGCGTTCCTAACTAGGGCTATGGCCCAATGGTCATGTGTGAGCGACAAAGTGCCAACCAAATGGCATGCTGAACCAAGATGGGAATATCATAAGCAGAATCATGCAAGACTGCATGAGGAAATAGAACTTCTCAGGCTGAATTCTGTCCCTCGGAGAGAATTTAATCGAGTTTCATCCTTATATGCTGAGGCGTCCAGCAAACTTACCTGCTCTCAAGAATCCCTGGTGGCACTCCAATCTCAACACGATGCCTCGATCAGGGAATTAAAAGAGAGACTTTCTACTACTGAGAAAAATTTACAAGAGGCCCAAAACAAACTATCAGATGCCAAATATTTGGCTGAAAGCTTCAAAACAACAGAAGCCTACTGCCAAATGGAGGATGACTGCCTTCAATATGGGGTTACGTTGGTTGTTAGCATCATAAAAGCAAAATATCCCAATAATTGTAGCCTTGATAGCGTGGGTGTCTTTGCTGACCAACTGTTGCCAATTGCTCCTCAGCGTGGCCTCTCAAATTTTTTTGATACATTCCTCCAAGGTGTTCCTGATTTTGCTAACCTGAGAATCTTGGCGAAACTCGTTGACATTGGGCATATAGATGACTAA

Protein sequence

MNRPLNTHASTIVISTPTIDEGSRLSTLHPFDFNSPYEFESDEAAFLTRAMAQWSCVSDKVPTKWHAEPRWEYHKQNHARLHEEIELLRLNSVPRREFNRVSSLYAEASSKLTCSQESLVALQSQHDASIRELKERLSTTEKNLQEAQNKLSDAKYLAESFKTTEAYCQMEDDCLQYGVTLVVSIIKAKYPNNCSLDSVGVFADQLLPIAPQRGLSNFFDTFLQGVPDFANLRILAKLVDIGHIDD
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G004900.1ClCG04G004900.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 130..157
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG04G004900Cla012173Watermelon (97103) v1wcgwmB255
The following gene(s) are paralogous to this gene:

None