ClCG04G004460 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTAGCGGTGTCTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCCCCACCGGTGCTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGCTGTCGCCGTCACAGGTTCCGGCGGAGGAGCACTGTGTGGCTGACGGCGGCGACGGTCACAATTCGGCTTGA ATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTAGCGGTGTCTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCCCCACCGGTGCTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGCTGTCGCCGTCACAGGTTCCGGCGGAGGAGCACTGTGTGGCTGACGGCGGCGACGGTCACAATTCGGCTTGA ATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTAGCGGTGTCTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCCCCACCGGTGCTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGCTGTCGCCGTCACAGGTTCCGGCGGAGGAGCACTGTGTGGCTGACGGCGGCGACGGTCACAATTCGGCTTGA MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
BLAST of ClCG04G004460 vs. Swiss-Prot
Match: ARGOS_ORYSJ (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica GN=ARGOS PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-12 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1
BLAST of ClCG04G004460 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 2.7e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG04G004460 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.9e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG04G004460 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.9e-11 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG04G004460 vs. Swiss-Prot
Match: ORS1_ARATH (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.9e-11 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 1
BLAST of ClCG04G004460 vs. TrEMBL
Match: A0A0A0L0Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G432970 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 9.8e-29 Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 1
BLAST of ClCG04G004460 vs. TrEMBL
Match: U5G936_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s03620g PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.7e-12 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 1
BLAST of ClCG04G004460 vs. TrEMBL
Match: U5G5G3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s03610g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.7e-12 Identity = 36/56 (64.29%), Postives = 48/56 (85.71%), Query Frame = 1
BLAST of ClCG04G004460 vs. TrEMBL
Match: A0A068UM56_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028963001 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-11 Identity = 33/59 (55.93%), Postives = 49/59 (83.05%), Query Frame = 1
BLAST of ClCG04G004460 vs. TrEMBL
Match: A0A0V0GQD7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.1e-11 Identity = 31/60 (51.67%), Postives = 50/60 (83.33%), Query Frame = 1
BLAST of ClCG04G004460 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-12 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG04G004460 vs. TAIR10
Match: AT2G41230.1 (AT2G41230.1 unknown protein) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-12 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 1
BLAST of ClCG04G004460 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-12 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG04G004460 vs. TAIR10
Match: AT2G41225.1 (AT2G41225.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 8.5e-08 Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1
BLAST of ClCG04G004460 vs. NCBI nr
Match: gi|700199561|gb|KGN54719.1| (hypothetical protein Csa_4G432970 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 1.4e-28 Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 1
BLAST of ClCG04G004460 vs. NCBI nr
Match: gi|566174296|ref|XP_006380977.1| (hypothetical protein POPTR_0006s03620g [Populus trichocarpa]) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-12 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 1
BLAST of ClCG04G004460 vs. NCBI nr
Match: gi|566174294|ref|XP_006380976.1| (hypothetical protein POPTR_0006s03610g, partial [Populus trichocarpa]) HSP 1 Score: 78.6 bits (192), Expect = 5.3e-12 Identity = 36/56 (64.29%), Postives = 48/56 (85.71%), Query Frame = 1
BLAST of ClCG04G004460 vs. NCBI nr
Match: gi|661886828|emb|CDP09546.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 33/59 (55.93%), Postives = 49/59 (83.05%), Query Frame = 1
BLAST of ClCG04G004460 vs. NCBI nr
Match: gi|566208512|ref|XP_006373706.1| (hypothetical protein POPTR_0016s03660g [Populus trichocarpa]) HSP 1 Score: 74.7 bits (182), Expect = 7.7e-11 Identity = 35/60 (58.33%), Postives = 51/60 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|