ClCG04G001700 (gene) Watermelon (Charleston Gray)

Overview
NameClCG04G001700
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRetrotransposon protein, putative, unclassified
LocationCG_Chr04 : 6105408 .. 6107651 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATTTACCCTCTTAATGCTACTACGACACTGGAAGCCGACGAGTTTCCTACTATGATACTAGAAGCCGACGAGTTTCCTACTACGTTACTGGAAGCCGACAGGTTTCCTACTATGTTACCGGAGACCTATGAGTTTCCTACTATGCTACCGAATGCCAACGGATGCCCTACTACATTTGTGAGCCTTCGGGCCACCAGATGTGTGTTAGGATGGGTTAAATCGCTTACTAGATGCCCTTTCAAGATTAGTTATTTATGTAAGTCCCACTAGTATGATGCATTTATTGGATATAAGTGCTTAGCCTGACCCCGATAGTGAGGTTACTTATTGAGTATTTTGTACTCATTCTTTTCATGTTTTATTTTTTAGGTAAGGAAAAGGACACATCGACAAATGATGAAAGAAAACCTTGACGGTGCCATAGGGACTAGACTAATGCTTTCGCACGAGTCTTCATGTTTTCCTTTCGTTTTAGTACCTGGGATTTGTTATTTGAACGAAAACTATGTTTTACTTTATTTATTTTTTTATGCCAAATTTTGGACTTTAATACATTAATGTTTGAGGGGTACCTCGACTAAAGGTTTTTGGTTTAAACGACGACAAATTTATTTATTTTAATGATGTTTCCTCAATTCTTAGTAAAATTATGAAAAATAGTATTTTGAGATGTATGCATGCCTATAGTGACAACCTAGTTCAAGTCCTAAGAAGTTGGGTCGTTACAACAACATAGATGTATCAATAATATATCAGTAGTCACTAAAAGTTCATTTCTCATACATTTTTAGTGTACCAGTAGTATATCACTTGTGATCTAAATCTATTTTAAGTATTGTATTGGTGTATCACTAGTTTATCAACACTCATTCAATTTTTATTTAAATTGTAACATAGATGTATTGGTAGTATATAAGTAGTTATTAAAAATTAATTTCACGTATATAGTGTACCAACAGTATATCACTCATGATCTAAATCTATTTGAAGTATTGTATTAGTATATCAGTAGTATATCCATACTCATTCAAAATTCAATTTTAAGTAAATAAATTCATTTTGATAGTTACACACTTATTCAAAATTCATTTAAAGTATAAATTAGTTTATCAATATTGGTCAATGCTCATAAAAAAATTAATTTTAAGTATATCATTAGTGTATCGGTAATATATCAACATTTATTTTAAATAAAATTTTAAGTATAACATTGTGATATTGATATATCAATTGTATAACTTATACTTCGTGTGGTGGTTGATCTCCTTTCTCCTTCAGGTTCGTGGAATATCCAAAAACTAAGGGAGACGTTGATGTCAGAAAATTTGGAGGAAATCCTTCGGATTCCTATATATCCAACTAATAGGGCTGATTGCTGGATTTGGCACTATGGTAACAAGGGTGAGTACTCGGTGAAGAGCGGCTGTAAATGTGTGATAGTTCATAGAATTTTGAGTTAGGCTATGGGTTGGTTGTCGGGTCGGCGTGGTGGAATCGTCTTTGGAAGCTCCCTATTCCTACTAAAGTTGCTTTTTCTGTTTGGCAGTCATGTCTTGAGAGTATTCCGGCGTTTGTTCCTTTGCGGCATAGGGGTATAGAAGTTTGTCCTTGGTGTCAAGTATATAGGCGTAAGGAGGAATCTGTGAGTCATGCTCTATTTGAGTGTAGTTGGGCTAAACGCATCTGGTCGTCCATATTTAGTTCGAGATGGTGTGTTAATGTTAAACATTTGAGTTGTATGGACATACGGACTGAGCTGGACAGGATGTTGTCTAATGAGGAGTTGGCTTGTGCTTGTATCACTGCTTGGGCCATTTAGGAGGATCGAAATAAAGTTGTTCATTCAACTGCTGTCCCTTCGGTGGAGGTCCGTTGTGGGTGGATTGTTGACTACCTGAATAGTTTTGGTAAGACCCATTTTGAGCCTTCTTGTTCTCCGATTCCTATTAGAGCTAGGTATGATTTGTTGGACAAAAATTTTAACATTATTCATTGTGACGCTGCTTTTAAACTTGGTGATCACAAAGTGGGAACTGGTGCGTTGTTGGTTCTCTGTTAGGCGAGATCTTAGCCTCCTTGAATGGGTTCAGAGATTTCTCTACGAATGTTTTATGTGTTGAAGGTTTTGCTGTTTTTGTGGGGTTTCGTTTGGCGGAAAGAATGAGTCTTTCTCATTTGTTAGTTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTATAGCATATTAG

mRNA sequence

ATGACGATTTACCCTCTTAATGCTACTACGACACTGGAAGCCGACGAGTTTCCTACTATGATACTAGAAGCCGACGAGTTTCCTACTACGTTACTGGAAGCCGACAGGTTTCCTACTATGTTACCGGAGACCTATGAGTTTCCTACTATGCTACCGAATGCCAACGGATGCCCTACTACATTTGTGAGCCTTCGGGCCACCAGATGTTCGTGGAATATCCAAAAACTAAGGGAGACGTTGATGTCAGAAAATTTGGAGGAAATCCTTCGGATTCCTATATATCCAACTAATAGGGCTGATTGCTGGATTTGGCACTATGGTAACAAGGGTGAGTACTCGAATTTTGAGTTAGGCTATGGGTTGGTTGTCGGGTCGGCGTGGTGGAATCGTCTTTGGAAGCTCCCTATTCCTACTAAAGTTGCTTTTTCTGTTTGGCAGTCATGTCTTGAGAGTATTCCGGCGTTTGTTCCTTTGCGGCATAGGGGTATAGAAGTTTGTCCTTGGTGTCAAGTATATAGGCGTAAGGAGGAATCTGTGAGTCATGCTCTATTTGAGTGTAGTTGGGCTAAACGCATCTGGTCGTCCATATTTAGTTCGAGATGGTGTGTTAATGTTAAACATTTGAGTTGTATGGACATACGGACTGAGCTGGACAGGATGTTGTCTAATGAGGAGTTGGCTTGTGCTTTTGTTCATTCAACTGCTGTCCCTTCGGTGGAGGTCCGTTGTGGGTGGATTGTTGACTACCTGAATAGTTTTGGTAAGACCCATTTTGAGCCTTCTTGTTCTCCGATTCCTATTAGAGCTAGTGGGAACTGGTGCGTTGTTGGTTCTCTGTTAGGCGAGATCTTAGCCTCCTTGAATGGGTTCAGAGATTTCTCTACGAATGTTTTATGTGTTGAAGGTTTTGCTGTTTTTGTGGGGTTTCGTTTGGCGGAAAGAATGAGTCTTTCTCATTTGTTAGTTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTATAGCATATTAG

Coding sequence (CDS)

ATGACGATTTACCCTCTTAATGCTACTACGACACTGGAAGCCGACGAGTTTCCTACTATGATACTAGAAGCCGACGAGTTTCCTACTACGTTACTGGAAGCCGACAGGTTTCCTACTATGTTACCGGAGACCTATGAGTTTCCTACTATGCTACCGAATGCCAACGGATGCCCTACTACATTTGTGAGCCTTCGGGCCACCAGATGTTCGTGGAATATCCAAAAACTAAGGGAGACGTTGATGTCAGAAAATTTGGAGGAAATCCTTCGGATTCCTATATATCCAACTAATAGGGCTGATTGCTGGATTTGGCACTATGGTAACAAGGGTGAGTACTCGAATTTTGAGTTAGGCTATGGGTTGGTTGTCGGGTCGGCGTGGTGGAATCGTCTTTGGAAGCTCCCTATTCCTACTAAAGTTGCTTTTTCTGTTTGGCAGTCATGTCTTGAGAGTATTCCGGCGTTTGTTCCTTTGCGGCATAGGGGTATAGAAGTTTGTCCTTGGTGTCAAGTATATAGGCGTAAGGAGGAATCTGTGAGTCATGCTCTATTTGAGTGTAGTTGGGCTAAACGCATCTGGTCGTCCATATTTAGTTCGAGATGGTGTGTTAATGTTAAACATTTGAGTTGTATGGACATACGGACTGAGCTGGACAGGATGTTGTCTAATGAGGAGTTGGCTTGTGCTTTTGTTCATTCAACTGCTGTCCCTTCGGTGGAGGTCCGTTGTGGGTGGATTGTTGACTACCTGAATAGTTTTGGTAAGACCCATTTTGAGCCTTCTTGTTCTCCGATTCCTATTAGAGCTAGTGGGAACTGGTGCGTTGTTGGTTCTCTGTTAGGCGAGATCTTAGCCTCCTTGAATGGGTTCAGAGATTTCTCTACGAATGTTTTATGTGTTGAAGGTTTTGCTGTTTTTGTGGGGTTTCGTTTGGCGGAAAGAATGAGTCTTTCTCATTTGTTAGTTTTGTTTGATTCATTGGTGTTGGTTCAGATTTTGGAAGGCATTATAGCATATTAG

Protein sequence

MTIYPLNATTTLEADEFPTMILEADEFPTTLLEADRFPTMLPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRADCWIWHYGNKGEYSNFELGYGLVVGSAWWNRLWKLPIPTKVAFSVWQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIWSSIFSSRWCVNVKHLSCMDIRTELDRMLSNEELACAFVHSTAVPSVEVRCGWIVDYLNSFGKTHFEPSCSPIPIRASGNWCVVGSLLGEILASLNGFRDFSTNVLCVEGFAVFVGFRLAERMSLSHLLVLFDSLVLVQILEGIIAY
Homology
[Close]
BLAST of ClCG04G001700 vs. TrEMBL
Match: M5W5F3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.6e-14
Identity = 52/169 (30.77%), Postives = 75/169 (44.38%), Query Frame = 1 

Query: 41  LPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRAD 100
           LP    F  M P      T    L  +   WN+  L++    + ++ IL+IP+      D
Sbjct: 643 LPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHD 702

Query: 101 CWIWHYGNKGEYSNFELGYGLV----------------VGSAWWNRLWKLPIPTKVAFSV 160
           C IWHY   G YS  + GY L                 + S +W ++W L IP K+ F +
Sbjct: 703 CLIWHYERNGMYS-VKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFL 762

Query: 161 WQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIW 194
           W+   + +P    L +R I   P C    RK ESV HA++ C  AK +W
Sbjct: 763 WRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVW 810

[Close]
BLAST of ClCG04G001700 vs. TrEMBL
Match: M5WJW2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020180mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.0e-13
Identity = 53/173 (30.64%), Postives = 76/173 (43.93%), Query Frame = 1 

Query: 41   LPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRAD 100
            LP    F  M P      T    L  +   WN+  L++    + ++ IL+IP+      D
Sbjct: 893  LPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHD 952

Query: 101  CWIWHYGNKGEYSNFELGYGLV----------------VGSAWWNRLWKLPIPTKVAFSV 160
            C IWHY   G YS  + GY L                 + S +W ++W L IP K+ F +
Sbjct: 953  CLIWHYERNGMYS-VKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFL 1012

Query: 161  WQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIWSSIF 198
            W+   + +P    L +R I   P C    RK ESV HA++ C  AK   +S F
Sbjct: 1013 WRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFF 1064

[Close]
BLAST of ClCG04G001700 vs. TrEMBL
Match: Q2R1K6_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g38890 PE=4 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 8.2e-11
Identity = 47/175 (26.86%), Postives = 77/175 (44.00%), Query Frame = 1 

Query: 41   LPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRAD 100
            LP  Y    +    N C      L     +W + K++E     ++E IL+I    +  +D
Sbjct: 1090 LPRDYSRRPITRKGNCCIKWVSDLLQDDGTWRVDKVQEHFWPIDVEMILKIRTSASLESD 1149

Query: 101  CWIWHYGNKGEYSNFELGYGLVVGSAW---------------WNRLWKLPIPTKVAFSVW 160
               WH    G++S   + Y LVV  A                W R+W   +P KV    W
Sbjct: 1150 FLAWHPDRLGKFSVRSV-YHLVVSLAETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAW 1209

Query: 161  QSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIWSSIFSSR 201
            ++   S+P     + R +E+   C +   +EE V+HAL  C  A+ +WS+++S+R
Sbjct: 1210 KAISNSLPTMKNKKKRNLELLSTCCICGAEEEDVAHALCHCQQARNLWSAMYSAR 1263

[Close]
BLAST of ClCG04G001700 vs. TrEMBL
Match: B9RYQ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1312540 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 1 

Query: 71  WNIQKLRETLMSENLEEILRIPIYPTNRADCWIWHYGNKGEYSNFELGYGLVVG------ 130
           W+   L +     +   I  IP+   N  D W W + +KG Y   +  Y L+ G      
Sbjct: 366 WDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYL-VKNCYRLLQGDLGRPE 425

Query: 131 SAWWNRLWKLPIPTKVAFSVWQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALF 190
           +++WN+ WKL IPTKV   +W+ C   I   + LR R +++ P C+   R+ E++ H LF
Sbjct: 426 TSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLF 485

Query: 191 ECSWAKRIW 194
            CS A+  W
Sbjct: 486 GCSMARECW 493

[Close]
BLAST of ClCG04G001700 vs. TrEMBL
Match: S8D906_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00896 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 46/171 (26.90%), Postives = 70/171 (40.94%), Query Frame = 1 

Query: 41   LPETYEFPTMLPNANGCPTTFVS--LRATRCSWNIQKLRETLMSENLEEILRIPIYPTNR 100
            +P T+ F        G  +  V   + +    WN  +LR+     +++ IL IP+   + 
Sbjct: 1251 IPNTFAFKPTSAAPQGVGSILVKDFILSNHSGWNHTRLRQIFSPLDVKHILSIPLAKNSC 1310

Query: 101  ADCWIWHYGNKGEYSNFELGYGLVVGSA----------------WWNRLWKLPIPTKVAF 160
             D  IWHY   GEYS  + GY L+ G                   W  LWKL +PT++  
Sbjct: 1311 PDRLIWHYTRHGEYS-VKTGYQLLKGREDMLRPSSSQVNHDCILMWRALWKLQLPTRILT 1370

Query: 161  SVWQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIW 194
              W+     +P    L  R +   P C V     ES  HA   C +++ +W
Sbjct: 1371 FGWRFAKNILPLKENLVRRRVGTDPTCPVCEMDRESWYHAFLTCPFSQAVW 1420

[Close]
BLAST of ClCG04G001700 vs. NCBI nr
Match: gi|595839072|ref|XP_007207773.1| (hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica])

HSP 1 Score: 87.4 bits (215), Expect = 5.1e-14
Identity = 52/169 (30.77%), Postives = 75/169 (44.38%), Query Frame = 1 

Query: 41  LPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRAD 100
           LP    F  M P      T    L  +   WN+  L++    + ++ IL+IP+      D
Sbjct: 643 LPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHD 702

Query: 101 CWIWHYGNKGEYSNFELGYGLV----------------VGSAWWNRLWKLPIPTKVAFSV 160
           C IWHY   G YS  + GY L                 + S +W ++W L IP K+ F +
Sbjct: 703 CLIWHYERNGMYS-VKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFL 762

Query: 161 WQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIW 194
           W+   + +P    L +R I   P C    RK ESV HA++ C  AK +W
Sbjct: 763 WRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVW 810

[Close]
BLAST of ClCG04G001700 vs. NCBI nr
Match: gi|595883500|ref|XP_007212800.1| (hypothetical protein PRUPE_ppa020180mg [Prunus persica])

HSP 1 Score: 84.0 bits (206), Expect = 5.7e-13
Identity = 53/173 (30.64%), Postives = 76/173 (43.93%), Query Frame = 1 

Query: 41   LPETYEFPTMLPNANGCPTTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRAD 100
            LP    F  M P      T    L  +   WN+  L++    + ++ IL+IP+      D
Sbjct: 893  LPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHD 952

Query: 101  CWIWHYGNKGEYSNFELGYGLV----------------VGSAWWNRLWKLPIPTKVAFSV 160
            C IWHY   G YS  + GY L                 + S +W ++W L IP K+ F +
Sbjct: 953  CLIWHYERNGMYS-VKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFL 1012

Query: 161  WQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESVSHALFECSWAKRIWSSIF 198
            W+   + +P    L +R I   P C    RK ESV HA++ C  AK   +S F
Sbjct: 1013 WRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFF 1064

[Close]
BLAST of ClCG04G001700 vs. NCBI nr
Match: gi|848866321|ref|XP_012833838.1| (PREDICTED: uncharacterized protein LOC105954702 [Erythranthe guttata])

HSP 1 Score: 83.2 bits (204), Expect = 9.7e-13
Identity = 66/259 (25.48%), Postives = 107/259 (41.31%), Query Frame = 1 

Query: 45  YEFPTMLPNANGCPTTFVSLRATRC-SWNIQKLRETLMSENLEEILRIPIYPTNRADCWI 104
           ++  T  P ++  P T   L      SWN+  +  T  + ++E IL IP+   + +D WI
Sbjct: 111 FKILTKRPVSSAFPNTVSDLMVPGFGSWNLDLISRTFWTVDVERILAIPVGGLSTSDIWI 170

Query: 105 WHYGNKGEYS-----NFELGYGLV--------------VGSAWWNRLWKLPIPTKVAFSV 164
           WH+ N G++S     +  L  G+V              V +  W  LW  P+P K+   +
Sbjct: 171 WHHSNNGKFSVRTCYHMVLTNGMVTRHNRMANADSTSGVANRDWKVLWNFPLPPKIRMFL 230

Query: 165 WQSCLESIPAFVPLRHRGIEVCPWC-QVYRRKEESVSHALFECSWAKRIWSS-------- 224
           W+    SIP  V L  R I + P C + ++ +EE   H L  C   + IW S        
Sbjct: 231 WRLGKNSIPTNVELYRRKIGLSPRCARCHKEEEEDALHILTTCQGMETIWRSPPFDKVSG 290

Query: 225 ---IFSSRWCVNVKHLSCMDI--------RTELDRMLSNEELACAFVHSTAVPSVEVRCG 264
                + +W +N++   C +             DR   N+EL         + +VE   G
Sbjct: 291 PVITCAWQWIMNLREQLCEEFFILAMVVAWQAWDR--RNKEL-----KGEEIMAVEALVG 350

[Close]
BLAST of ClCG04G001700 vs. NCBI nr
Match: gi|727428199|ref|XP_010469706.1| (PREDICTED: uncharacterized protein LOC104749719 [Camelina sativa])

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1 

Query: 71  WNIQKLRETLMSENLEEILRIPIYPTNRADCWIWHYGNKGEYSNFELGYGLV-------- 130
           W++  L+E +  E+++ IL +PI    R D  +WHY   G YS  + GY +         
Sbjct: 786 WHLPILQEYMDPEDIQIILSLPISKYFRPDRLVWHYTQSGRYS-VKSGYKVAQDMKADIE 845

Query: 131 VG---SAWWNRLWKLPIPTKVAFSVWQSCLESIPAFVPLRHRGIEVCPWCQVYRRKEESV 190
           VG   SA   + W+LP+P K+    WQ    S+P  V L  RG+     C+    +EES+
Sbjct: 846 VGPNVSALKAKAWELPVPPKIKHFFWQIASGSLPVTVRLASRGVNCDTICKRCDLEEESI 905

Query: 191 SHALFECSWAKRIWSSIF 198
           +H LFEC  ++++W  IF
Sbjct: 906 NHTLFECPHSRQVWERIF 922

[Close]
BLAST of ClCG04G001700 vs. NCBI nr
Match: gi|985429304|ref|XP_015384077.1| (PREDICTED: uncharacterized protein LOC107176301 [Citrus sinensis])

HSP 1 Score: 80.5 bits (197), Expect = 6.3e-12
Identity = 45/154 (29.22%), Postives = 73/154 (47.40%), Query Frame = 1 

Query: 59  TTFVSLRATRCSWNIQKLRETLMSENLEEILRIPIYPTNRADCWIWHYGNKGEYSNFELG 118
           TT   L     +WN  KL+     E+ E +L+I + P+++ D  +WH+  KGEY+  + G
Sbjct: 3   TTVAELITADSTWNEAKLKHHFCEEDTEAMLKISLPPSHKEDSLLWHFDKKGEYT-VKSG 62

Query: 119 YGLVVGSAW-------------WNRLWKLPIPTKVAFSVWQSCLESIPAFVPLRHRGIEV 178
           Y + +   +             WN LW L +  K+   +W++    +P    L  R    
Sbjct: 63  YQVALKLKFPNQASSSASSPQRWNNLWSLNLLEKIKIFMWRASKNLLPTAENLWKRKCLQ 122

Query: 179 CPWCQVYRRKEESVSHALFECSWAKRIWSSIFSS 200
            P C+   R  E++ HAL EC   K+IW+ + SS
Sbjct: 123 DPICKRCCRSVETIHHALMECKATKKIWAHLLSS 155

The following BLAST results are available for this feature:
BLAST of ClCG04G001700 vs. TrEMBL
Match NameE-valueIdentityDescription
M5W5F3_PRUPE3.6e-1430.77Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026368mg PE=4 S... [more]
M5WJW2_PRUPE4.0e-1330.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020180mg PE=4 SV=1[more]
Q2R1K6_ORYSJ8.2e-1126.86Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
B9RYQ2_RICCO1.4e-1032.56Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1312540 PE=4 SV=1[more]
S8D906_9LAMI1.2e-0926.90Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00896 PE=4 SV=1[more]
BLAST of ClCG04G001700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595839072|ref|XP_007207773.1|5.1e-1430.77hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica][more]
gi|595883500|ref|XP_007212800.1|5.7e-1330.64hypothetical protein PRUPE_ppa020180mg [Prunus persica][more]
gi|848866321|ref|XP_012833838.1|9.7e-1325.48PREDICTED: uncharacterized protein LOC105954702 [Erythranthe guttata][more]
gi|727428199|ref|XP_010469706.1|1.3e-1234.06PREDICTED: uncharacterized protein LOC104749719 [Camelina sativa][more]
gi|985429304|ref|XP_015384077.1|6.3e-1229.22PREDICTED: uncharacterized protein LOC107176301 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026960RVT-Znf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G001700.1ClCG04G001700.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 127..193
score: 8.1
NoneNo IPR availablePANTHERPTHR25952FAMILY NOT NAMEDcoord: 1..223
score: 1.8
NoneNo IPR availablePANTHERPTHR25952:SF189COPPER ION BINDING / ELECTRON CARRIER PROTEINcoord: 1..223
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG04G001700Cucurbita moschata (Rifu)cmowcgB767
ClCG04G001700Wild cucumber (PI 183967)cpiwcgB309
ClCG04G001700Cucumber (Chinese Long) v2cuwcgB296
ClCG04G001700Melon (DHL92) v3.5.1mewcgB526
ClCG04G001700Watermelon (97103) v1wcgwmB256
ClCG04G001700Cucurbita pepo (Zucchini)cpewcgB434
ClCG04G001700Cucurbita pepo (Zucchini)cpewcgB442
ClCG04G001700Bottle gourd (USVL1VR-Ls)lsiwcgB135
ClCG04G001700Cucumber (Gy14) v2cgybwcgB283
ClCG04G001700Melon (DHL92) v3.6.1medwcgB522
ClCG04G001700Silver-seed gourdcarwcgB0275
ClCG04G001700Silver-seed gourdcarwcgB0276
ClCG04G001700Cucumber (Chinese Long) v3cucwcgB319
ClCG04G001700Watermelon (97103) v2wcgwmbB200
ClCG04G001700Wax gourdwcgwgoB387
ClCG04G001700Cucurbita maxima (Rimu)cmawcgB766
ClCG04G001700Cucurbita maxima (Rimu)cmawcgB770