ClCG03G012460 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G012460
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Retrotransposon protein, putative, unclassified
Location	CG_Chr03 : 25406235 .. 25407094 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGGTTCAAATCTAGTTCTCTTGTGTAAATCTGGAGGGACATAACGAAAGTAAGGTCGAGATCGATCAAACTGAGAATAGGGATCTCCAAAAGAATCCAGTTCTAAGAAAGGAAAATCCAATGGATTAAGCCCCTATCGACGCTACCAAGGGAAGCAACGGAGTAACAGAGATGAACTGAGGCGGATCCAAGAAGACGAGGGGCGTATCCCGAGGAACAGTAACTTGGTCTGA

mRNA sequence

ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGGGATCTCCAAAAGAATCCAGTTCTAAGAAAGGAAAATCCAATGGATTAAGCCCCTATCGACGCTACCAAGGGAAGCAACGGAGTAACAGAGATGAACTGAGGCGGATCCAAGAAGACGAGGGGCGTATCCCGAGGAACAGTAACTTGGTCTGA

Coding sequence (CDS)

ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGGGATCTCCAAAAGAATCCAGTTCTAAGAAAGGAAAATCCAATGGATTAAGCCCCTATCGACGCTACCAAGGGAAGCAACGGAGTAACAGAGATGAACTGAGGCGGATCCAAGAAGACGAGGGGCGTATCCCGAGGAACAGTAACTTGGTCTGA

Protein sequence

MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEGSPKESSSKKGKSNGLSPYRRYQGKQRSNRDELRRIQEDEGRIPRNSNLV

Homology

[Close]

BLAST of ClCG03G012460 vs. TrEMBL
Match: A0A0D2U033_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G348300 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 70/242 (28.93%), Postives = 116/242 (47.93%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W FD+ L      +  K   + +F ++ FW+   N+P     R++V  + N +GEL  +D
Sbjct: 106 WLFDRCLFSMLPFEKGKDFDSYEFWWSPFWLRIYNIPFELLERQMVLDVRNALGELVAID 165

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
             +    W + + ++VK+++ KPLRR+V V  R   EV  + I YE+L DFCYG G+I H
Sbjct: 166 WRDRNGGWTEFVRIKVKINVLKPLRRVVKVLDREGTEVIGV-IKYERLPDFCYGCGIIGH 225

Query: 126 LLKDCETHRGTM---EKDLQYSSILH----FNGSIQNGGKGGSKAGKSKGKKRNGWRAKE 185
             K C  ++      E +LQY S +     +    +N  + G +  KSK +       +E
Sbjct: 226 SSKICRHNKEASKLNESNLQYGSWMRAPLVYPTQDRNIRRNGVELMKSKDQMNAD--REE 285

Query: 186 QQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEGSPKESSSKKGKSNGLSPYRRYQGKQRS 241
            Q   +GE  Q  ++G+             +  SP E  S K   +GL    R++ K++ 
Sbjct: 286 SQSNSRGESEQMGQKGKETSGEEE-----SMSTSPWEKRSHKAMRDGLG---RFKSKRKR 336

[Close]

BLAST of ClCG03G012460 vs. TrEMBL
Match: C5Y174_SORBI (Putative uncharacterized protein Sb04g017843 (Fragment) OS=Sorghum bicolor GN=Sb04g017843 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.5e-17
Identity = 70/260 (26.92%), Postives = 118/260 (45.38%), Query Frame = 1


Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           +E G W F K L++  + +GNK+I  +DF +   WI  + +PL   TR+   ++G MVG+
Sbjct: 8   LEEGPWMFGKELVVVAEFEGNKTIDEVDFFFIPIWIRVHKMPLGLMTREAGELIGEMVGK 67

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSK--IPITYEKLGDFCY 120
           +  VD +E  R   + L ++V++DI KPL R V + +      +    P+ YE L DFC+
Sbjct: 68  VLDVDADENGRAVGEFLRIKVRLDIRKPLMRGVTLDIGDGDHENNKWCPLVYEFLPDFCF 127

Query: 121 GYGLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKE 180
             GLI H+ + C  +        Q+S  L F   I    + G ++   K KK  G   +E
Sbjct: 128 ICGLIGHVDRACPYYAQNRSSP-QFSRALRF---IPERKRFGEESKDEKAKK--GLTFEE 187

Query: 181 QQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEGSPKESSSKKGKSNGLSPYRRYQGKQRS 240
                  E +   + G    D+ +  +    + +      K G S G     R +G+   
Sbjct: 188 TVEASVKEITDKARGGVVAVDKEKPMIKKDEKQTQSAGDKKPGGSRGFKRRERARGEGMG 247

Query: 241 NRDELRRIQEDEGRIPRNSN 259
            ++        E + PR+ +
Sbjct: 248 GKEASEEAVPTEKKRPRSKS 261

[Close]

BLAST of ClCG03G012460 vs. TrEMBL
Match: A0A0D2SDK4_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_009G348500 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-16
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W FD+ L      +  K   + +F ++ FW+   N+PL    R+    +GN VG+L  +D
Sbjct: 96  WLFDRCLFSMLPFEKGKDFDSYEFWWSPFWLRIYNIPLELMDRQTALDVGNAVGKLVAID 155

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
            ++    W + + ++VK+++ KPLRR+V +  R  +EV+++ I YE+L DFCY  GL+ H
Sbjct: 156 WKDRNGGWTEFIRIKVKINVLKPLRRVVKLLDREGSEVTEV-IKYERLPDFCYACGLVGH 215

Query: 126 LLKDCETHR---GTMEKDLQY 144
           L K C  ++      E  LQY
Sbjct: 216 LSKTCNINKESWALTESSLQY 235

[Close]

BLAST of ClCG03G012460 vs. TrEMBL
Match: W9RRS1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024909 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-16
Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W  D+AL++ + L+      + DF Y+ FW+  +NLPL G   +I  ++G+++G    V 
Sbjct: 96  WSSDRALVVLKPLENGDMADSDDFCYSKFWVQLHNLPLEGRLSRIGEMVGDIIGSTVSVQ 155

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
            +++ R W + + +RV +DI+KP+RR V + +     +    + YEKL DFCYG G   H
Sbjct: 156 QDDKGRCWGQYVRVRVVLDITKPIRRQVKIILGDGEYLVWTDLRYEKLPDFCYGCGKFGH 215

Query: 126 LLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQLQQKG 185
             ++C      +  DL   SIL +   ++    GG       G  R   R + +  +  G
Sbjct: 216 GTRECPAEGVAVVTDL---SILPYGSWLRAPRMGG-------GSHR---RVERRPARTHG 275

Query: 186 EPSQTPKEGRRKDDRSRLNLGAQ 209
           +    P  G      S L  G+Q
Sbjct: 276 DNLSRPLRGMEIPQISPLVSGSQ 285

[Close]

BLAST of ClCG03G012460 vs. TrEMBL
Match: W9RBJ0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024925 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.5e-16
Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W  D+AL++ + L+      + DF Y+ FW+  +NLPL G   +I  ++G+++G    V 
Sbjct: 96  WSSDRALVVLKPLENGDMADSDDFCYSKFWVQLHNLPLEGRLSRIGEMVGDIIGSTVSVQ 155

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
            +++ R W + + +RV +DI+KP+RR V + +     +    + YEKL DFCYG G   H
Sbjct: 156 QDDKGRCWGQYVRVRVVLDITKPIRRQVKIILGDGEYLVWTDLRYEKLPDFCYGCGKFGH 215

Query: 126 LLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGG 161
             ++C      +  DL   SIL +   ++    GG
Sbjct: 216 GTRECPAEGVAVVTDL---SILPYGSWLRAPRMGG 247

[Close]

BLAST of ClCG03G012460 vs. NCBI nr
Match: gi|763794260|gb|KJB61256.1| (hypothetical protein B456_009G348300 [Gossypium raimondii])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 70/242 (28.93%), Postives = 116/242 (47.93%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W FD+ L      +  K   + +F ++ FW+   N+P     R++V  + N +GEL  +D
Sbjct: 106 WLFDRCLFSMLPFEKGKDFDSYEFWWSPFWLRIYNIPFELLERQMVLDVRNALGELVAID 165

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
             +    W + + ++VK+++ KPLRR+V V  R   EV  + I YE+L DFCYG G+I H
Sbjct: 166 WRDRNGGWTEFVRIKVKINVLKPLRRVVKVLDREGTEVIGV-IKYERLPDFCYGCGIIGH 225

Query: 126 LLKDCETHRGTM---EKDLQYSSILH----FNGSIQNGGKGGSKAGKSKGKKRNGWRAKE 185
             K C  ++      E +LQY S +     +    +N  + G +  KSK +       +E
Sbjct: 226 SSKICRHNKEASKLNESNLQYGSWMRAPLVYPTQDRNIRRNGVELMKSKDQMNAD--REE 285

Query: 186 QQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEGSPKESSSKKGKSNGLSPYRRYQGKQRS 241
            Q   +GE  Q  ++G+             +  SP E  S K   +GL    R++ K++ 
Sbjct: 286 SQSNSRGESEQMGQKGKETSGEEE-----SMSTSPWEKRSHKAMRDGLG---RFKSKRKR 336

[Close]

BLAST of ClCG03G012460 vs. NCBI nr
Match: gi|823218710|ref|XP_012442045.1| (PREDICTED: uncharacterized protein LOC105767062 [Gossypium raimondii])

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-17
Identity = 66/208 (31.73%), Postives = 104/208 (50.00%), Query Frame = 1


Query: 6   WFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVD 65
           W FD+ L      +  K I + +F ++ FW+   N+PL    R+    +GN VGEL  +D
Sbjct: 107 WLFDRCLFSMLPFEKGKDIESYEFGWSPFWLRIYNVPLELMDRQTALDVGNAVGELVAID 166

Query: 66  PEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRH 125
            ++    W +   ++VK+++ KPLRR+V +  R   EV+ + I YE+L DFCY  GLI H
Sbjct: 167 WKDRNGGWTEFFRIKVKINVLKPLRRVVKLVDREGLEVTGV-IKYERLPDFCYACGLIGH 226

Query: 126 LLKDCETHRGTM---EKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQLQ 185
             + C  ++ ++   E  LQY   +                 ++K  +RNG    +Q  Q
Sbjct: 227 SSRSCNYNKESLAMTESRLQYGGWMR---------APTVNLTQNKEIRRNGVEIVKQIAQ 286

Query: 186 QKG--EPSQTPKEGR--RKDDRSRLNLG 207
           +    E SQ+   GR  R D + R+NLG
Sbjct: 287 RSDDREESQSNSRGRVGRWDRKKRINLG 304

[Close]

BLAST of ClCG03G012460 vs. NCBI nr
Match: gi|985469308|ref|XP_015380691.1| (PREDICTED: uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 49/174 (28.16%), Postives = 95/174 (54.60%), Query Frame = 1


Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           +  G W FD+AL++  + KG   ++   F + +FWI   N+P+    ++++  LG M+G 
Sbjct: 72  LTGGPWHFDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGA 131

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           +E+++ +E      +   +RV ++I+ PL++++ +K    +++ ++P+ YE+L DFCY  
Sbjct: 132 VEEIETDENGECLGEFARIRVLINITLPLKKILFLKQEGESDI-QMPVVYERLPDFCYCC 191

Query: 121 GLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGW 175
           G+I H  K+C   +G  ++ L Y   +    +I  GG+          K RN W
Sbjct: 192 GIIGHQYKECAKFQGQQKEQLPYGGWMK---AIIIGGRA--------RKNRNKW 233

[Close]

BLAST of ClCG03G012460 vs. NCBI nr
Match: gi|568862941|ref|XP_006484927.1| (PREDICTED: uncharacterized protein LOC102626623 [Citrus sinensis])

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 61/219 (27.85%), Postives = 108/219 (49.32%), Query Frame = 1


Query: 1   MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGE 60
           +  G W FDKALI+  +  G  SI    F + SFW+  + +P+    +  +  LG  +G+
Sbjct: 94  LTEGPWHFDKALIVLVEPVGMGSIKRQPFTHTSFWVQIHGMPIKCMVKGTIEKLGEKIGQ 153

Query: 61  LEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGY 120
           +E+V+ +EE         +R+ +DI+KPL+R++ +K     ++  + I Y++L DFC+  
Sbjct: 154 VEEVETDEEGECIGPFARVRISVDITKPLKRILILKQEGEEDIVML-IKYDRLPDFCFCC 213

Query: 121 GLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQ 180
           GLI H  ++C  ++G  ++ L Y   +    S +       K  KS+   +     +   
Sbjct: 214 GLIGHQFRECIQYKGQPKEKLIYGGWMKALTSFELAKLSRGKNRKSRRDDQPDATTRNTS 273

Query: 181 LQQKGEPSQTPKEGRRKDDRSRLN-LGAQLEGSPKESSS 219
           +Q + +P   PKE     + S+ + LG     SP E  S
Sbjct: 274 VQIQIQPK--PKEQPSNPNPSKHDGLGVTQVDSPSEEMS 309

[Close]

BLAST of ClCG03G012460 vs. NCBI nr
Match: gi|985472039|ref|XP_015381386.1| (PREDICTED: uncharacterized protein LOC107174768 [Citrus sinensis])

HSP 1 Score: 97.1 bits (240), Expect = 5.0e-17
Identity = 55/206 (26.70%), Postives = 103/206 (50.00%), Query Frame = 1


Query: 4   GSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEK 63
           G W FD ALI+F +  G   I    F + SFWI F+N+PL+   +  V  LG+++G++E 
Sbjct: 97  GPWHFDNALIVFTEPTGVGDIKKQSFSHTSFWIQFHNVPLMCMDKYAVQKLGSLIGKVED 156

Query: 64  VDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLI 123
           VD +E        +  R+ +D+++PL++++ ++     + + I + YE+L  FC+  GL+
Sbjct: 157 VDTDEVGECVGPIVRTRISVDVTRPLKKIMFLQQEDRVK-TPIGVQYERLPKFCFCCGLV 216

Query: 124 RHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAK--EQQL 183
            H  ++C  ++G  ++ L Y S L      +            K ++R  W  +  +Q L
Sbjct: 217 GHQYRECLKYKGQQKEKLAYGSWLKALPVTE---------WNRKNRRRGKWNKEHHQQNL 276

Query: 184 QQKGEPSQTPKEGRRKDDRSRLNLGA 208
           +     SQ   + R+     + + G+
Sbjct: 277 EMVNTASQNQNQTRQTQSNPKKDNGS 292

The following BLAST results are available for this feature:

BLAST of ClCG03G012460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2U033_GOSRA	1.4e-18	28.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G348300 PE=4 SV=1	[more]
C5Y174_SORBI	4.5e-17	26.92	Putative uncharacterized protein Sb04g017843 (Fragment) OS=Sorghum bicolor GN=Sb...	[more]
A0A0D2SDK4_GOSRA	3.8e-16	34.04	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_009G348500 PE=...	[more]
W9RRS1_9ROSA	6.5e-16	29.06	Uncharacterized protein OS=Morus notabilis GN=L484_024909 PE=4 SV=1	[more]
W9RBJ0_9ROSA	8.5e-16	31.61	Uncharacterized protein OS=Morus notabilis GN=L484_024925 PE=4 SV=1	[more]

BLAST of ClCG03G012460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|763794260\|gb\|KJB61256.1\|	2.0e-18	28.93	hypothetical protein B456_009G348300 [Gossypium raimondii]	[more]
gi\|823218710\|ref\|XP_012442045.1\|	1.7e-17	31.73	PREDICTED: uncharacterized protein LOC105767062 [Gossypium raimondii]	[more]
gi\|985469308\|ref\|XP_015380691.1\|	2.2e-17	28.16	PREDICTED: uncharacterized protein LOC107174364 [Citrus sinensis]	[more]
gi\|568862941\|ref\|XP_006484927.1\|	3.8e-17	27.85	PREDICTED: uncharacterized protein LOC102626623 [Citrus sinensis]	[more]
gi\|985472039\|ref\|XP_015381386.1\|	5.0e-17	26.70	PREDICTED: uncharacterized protein LOC107174768 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025558	DUF4283
IPR025836	Zn_knuckle_CX2CX4HX4C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G012460.1	ClCG03G012460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 1..81 score: 7.5
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 83..131 score: 6.9
None	No IPR available	PANTHER	PTHR31286	FAMILY NOT NAMED	coord: 1..144 score: 1.8
None	No IPR available	PANTHER	PTHR31286:SF3	SUBFAMILY NOT NAMED	coord: 1..144 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G012460	Cucumber (Gy14) v1	cgywcgB607
ClCG03G012460	Cucurbita maxima (Rimu)	cmawcgB054
ClCG03G012460	Cucurbita maxima (Rimu)	cmawcgB113
ClCG03G012460	Cucurbita moschata (Rifu)	cmowcgB045
ClCG03G012460	Cucurbita moschata (Rifu)	cmowcgB101
ClCG03G012460	Wild cucumber (PI 183967)	cpiwcgB049
ClCG03G012460	Cucumber (Chinese Long) v2	cuwcgB046
ClCG03G012460	Melon (DHL92) v3.5.1	mewcgB245
ClCG03G012460	Watermelon (97103) v1	wcgwmB226
ClCG03G012460	Cucurbita pepo (Zucchini)	cpewcgB327
ClCG03G012460	Cucurbita pepo (Zucchini)	cpewcgB599
ClCG03G012460	Bottle gourd (USVL1VR-Ls)	lsiwcgB364
ClCG03G012460	Cucumber (Gy14) v2	cgybwcgB043
ClCG03G012460	Melon (DHL92) v3.6.1	medwcgB237
ClCG03G012460	Silver-seed gourd	carwcgB0864
ClCG03G012460	Silver-seed gourd	carwcgB0944
ClCG03G012460	Cucumber (Chinese Long) v3	cucwcgB050
ClCG03G012460	Watermelon (97103) v2	wcgwmbB186
ClCG03G012460	Wax gourd	wcgwgoB362