ClCG03G012220 (gene) Watermelon (Charleston Gray)

NameClCG03G012220
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 24654593 .. 24655912 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTTTATGTCACAAAAGGGGTGATGTTTACTGTCCTCACATCTCCTCTTGGGTTGAGCGCGATAATCTGGGAGGGGGTGTGACATACTAACTAAAATTACTTATAACTATAGATTGAAGTTACTGATGATGAAATCCAAGAAAAAAGATGGTGAAGGAAAGGTTAAGATTACTATATAATTTTGTGTATAGTGATAGACATAGATGGAAGTCTATCTGTGGCTATAAGTGATGTCTCTTTCTCCCAAGTTTGATCTTTTTTTTTTTTCTTTTTTTTGTAGCAAACACAGCAAAGTATTCCAACCCAGACTTGGAAACACCACTAGAGCAAGAAACACAAGAAGTTGAAACACAACAAAGTATTCCAACCCAACACTTGGAAACACTAGAGGAAGAAACACAGAAGTTGCAAACACAAGAGACACAAAAGTTACCAACACAAGAGACACTCTGGAGGTGTTGACAACTGAAGAGTTAGAGTAGTTGGCAGCACAATAGTTTGAGGAGTTGGAGGATGTTTAGCAACAAACAACAAAACAAAAGGAGGAGGTTTGACTCTTTTTCCCCTTTCATTTCAATCTATCACGCTAGATAGACAATTATAACACAAGTTACTGTAGAATATTGAAGTTTAGATTGAAGAAGTTGCAAATAACCAAAGAGAAGAAGGAAGGGAAGAAGATGAAAATGAAAATAAAAATGATGAAGAAGAAAATCGAAAAATAGAATAAAACAAAACATGCAAGAAAAAAGGTAAATCTGAACTTAGATTGAAAAGAAGTAATAAATACTAATAGAATTCTATTACTGTTTATTGTAGTATTCGATATTACTCTCTTCTAACTTCCAACTTAAAAACATTTTCTTCCTTGCAGCAACAAGAGCAAGTAGAGGAAGTTTAGGAAGATGCTAATGAAGAAGATGCTAATGAAACAACGAATGAAGACAAACAAAAAAAAAAAAAACAAATAAATGCAAAAGAAGGTAAATATCAAACTACTATATTAATTCTTTTACATTAAACAACTATTATATTATCAACATTCTTCCAATTTCATTTTAGGTTGTTCAACAAAAAGGAAAGGCTAAAAAGTTTAGACTGAATGTGGTTCTTGATACCCATATTGAAAATGAAAGGCCAAAGCGACAAAGAAAACCATCACAAAAAGCATTGGACAACAAAGTCCCACCAAAGAAAGACAAAGAGAAGAAAGTATCCCCAAAGAAGCCAACAACAAAAACCTCCTTGATGGACAATGCACCAAGCTTCGATTTAAACATCTTTCAAATTAAATCATCGCAATCTGAATCTTGA

mRNA sequence

ATGGACAGTTTATGTCACAAAAGGGGTGATGTTTACTGTCCTCACATCTCCTCTTGGGTTGAGCGCGATAATCTGGGAGGGGCAAACACAGCAAAGTATTCCAACCCAGACTTGGAAACACCACTAGAGCAAGAAACACAAGAAGTTGAAACACAACAAAGAAGAAACACAGAAGTTGCAAACACAAGAGACACAAAAGTTACCAACACAAGAGACACTCTGGAGGTTGTTCAACAAAAAGGAAAGGCTAAAAAGTTTAGACTGAATGTGGTTCTTGATACCCATATTGAAAATGAAAGGCCAAAGCGACAAAGAAAACCATCACAAAAAGCATTGGACAACAAAGTCCCACCAAAGAAAGACAAAGAGAAGAAAGTATCCCCAAAGAAGCCAACAACAAAAACCTCCTTGATGGACAATGCACCAAGCTTCGATTTAAACATCTTTCAAATTAAATCATCGCAATCTGAATCTTGA

Coding sequence (CDS)

ATGGACAGTTTATGTCACAAAAGGGGTGATGTTTACTGTCCTCACATCTCCTCTTGGGTTGAGCGCGATAATCTGGGAGGGGCAAACACAGCAAAGTATTCCAACCCAGACTTGGAAACACCACTAGAGCAAGAAACACAAGAAGTTGAAACACAACAAAGAAGAAACACAGAAGTTGCAAACACAAGAGACACAAAAGTTACCAACACAAGAGACACTCTGGAGGTTGTTCAACAAAAAGGAAAGGCTAAAAAGTTTAGACTGAATGTGGTTCTTGATACCCATATTGAAAATGAAAGGCCAAAGCGACAAAGAAAACCATCACAAAAAGCATTGGACAACAAAGTCCCACCAAAGAAAGACAAAGAGAAGAAAGTATCCCCAAAGAAGCCAACAACAAAAACCTCCTTGATGGACAATGCACCAAGCTTCGATTTAAACATCTTTCAAATTAAATCATCGCAATCTGAATCTTGA

Protein sequence

MDSLCHKRGDVYCPHISSWVERDNLGGANTAKYSNPDLETPLEQETQEVETQQRRNTEVANTRDTKVTNTRDTLEVVQQKGKAKKFRLNVVLDTHIENERPKRQRKPSQKALDNKVPPKKDKEKKVSPKKPTTKTSLMDNAPSFDLNIFQIKSSQSES
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G012220.1ClCG03G012220.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 42..62
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None