ClCG03G011210 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G011210
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Retrotransposon gag protein
Location	CG_Chr03 : 21217390 .. 21219386 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTAGGGGTATCCTATGCAATGAGTTTGCATAAGACCAGACCACAAAATAGTAATCACTAGATGTAACTCCCAATTATTTTTAATTTGGTTTTGTACTGCTTCCGCTGTATTAAGGATTACAACCCTTTCAAACACTTGGGTTTATTCGTAGAACCTTTTAAGGAGGAAAGGAGACAAATGAGAGAAGTTAGAGAACAAAGAGCTAGAGAAGAGCAAATTCATGCAGAAGGCACATTTAAGGAAGGGTTCTCTGAAGAAGAGAGAGAAGAGGAAGCGATGGCACACCATGAAGAGCGTACTCTAAGGGACCTCTTGGCTCCAAACGTTGACCAGCAGCCCCTCTATAGAGCTTAAGTCGGGATTAATTCATTTCCTTATTTCTCTGGACGTGCAGGTGGCAGTTGAAAGAGTTTCACATAGTGTGCGATGGCATGCGCCCCAGAGCCTTCTCGTTCTAACTGAAGGATGATGCCAATGATTGACTTTATTTTCTTCCTGCCAGTTTTGTGACCACATGGAAAGAAATTATTAGAGAAGTTCTTTCCACCTTTGAGAGCGGCGAGGATTACGAAGGAAATTTATGACATCATGCAGATCGCTGGTGAAACCTTACACGAATACTGGGAATGCATCAAGCGTCTATGCGCAAGTTACCCCAACCACCAAATATTTGATTTGTTGCTCATCCACTACTTCTATGAAGCGCTTGACCCTAGTTATAGAAGTACTATTGATGCAACTAGTGGTGGTTCTCTAGTGAGCGAGACTCCCACTAAAGCCAAACAGCTGATATCCACATGTCAAAGAACGCCCGACATTTCGGGACTTAAGCTTCGAAATGCTAAATCAACACAAGAGGTAAGTGAACTTAAGCTGAACTTGTTGAACTAACCACTATGGTGAAACATGCTTTTTCTATCAAGGCACAACAGTCCTAGGAGTCTACAACTGAAGTCAACTATGTTGGTAACCAGCAAGAATGAATATATAATTACAATCGCTGGGGAAGCCAAGGTTAGAGTAGCTCTAGGATGCCACTAGAGGACATGGTCAAAAGCCTAACAAAATCCACCATGCAGATTAAGCAGAGTCAAGAGTTGTTTCAACAGACCACCACTACTCATATGAAGAGTATGGCTCACTACAAAAAAAATTCACCTATGCCAACGCCATAAAATGTCGTTGGCAAAAAGTGGTTCTTCCGACGGTTTGAAGCCCTATCTAAATAAATATTTCTATTGACGATAGAAATGTAGGCATCAGTAGAGAGAGGCCTATGCCGATGATATTATAATTACCTGTTGGCACAAGAGGGTCTTTGTCGATGGTTGATTATTTTCGTTGGCAAAAATGGGTCTTTGTCGATAGCGTATTACATTTCATTGACATAGGGTGAGATTTTCCGACACCTTACTTATGGCATCGACAGTTCTAAAAATAAAAATCCTATTTTTATTTTCCCTTTCTCTCTTCTTTCCCAAAGTATGTGTGTCGCTCCAGCTCTAACTCTCCCTCGCAAACAGCCCACCGCCGCCCGTCGTTGAAGTTCGTCGGCCTCCCATCCCCTCTCTCCCTAACCCACCACTGTTACCCATCCCCTCTCTCCCTCAGATCTGCCGGTCGCCACTCCCTCCGTCGTTGAAGCTTGGCAACTATGACGAACAGCATCATGACAAAGCGTTACTACACTGCCCTTATTATGACAGACAGCATCGCTACGCTCTCAGCTTTCCTTTCTTTTGAAGAATTTACAATTTTGAAAAATATTTTAGGCGGCCACTTCTATAAATTGAGGGGTTTTCAGCAATCTTAGATAAGAAGAGACACACGAAAACTCAGAGGAAAAGGGAGCCTAAAGGTGCAAGTTTGTTATCACAAAGAGAGAAAAGTGTTGGAGAAGAGTTGAAGGCCGTTTGAGATCTGAGGTACTGACCAAGTGGAGATTAAAGGAATTCAATGTCGGGAAGCAATTCAAGAGTCTTTCTTCCTAA

mRNA sequence

ATGCGAGTAGGGGTATCCTATGCAATGAGTTTGCATAAGACCAGACCACAAAATAAACCTTTTAAGGAGGAAAGGAGACAAATGAGAGAAGTTAGAGAACAAAGAGCTAGAGAAGAGCAAATTCATGCAGAAGGCACATTTAAGGAAGGGTTCTCTGAAGAAGAGAGAGAAGAGGAAGCGATGGCACACCATGAAGAGCGTACTCTAAGGGACCTCTTGGCTCCAAACTTGAAAGAGTTTCACATAGTGTGCGATGGCATGCGCCCCAGAGCCTTCTCGATTACGAAGGAAATTTATGACATCATGCAGATCGCTGGTGAAACCTTACACGAATACTGGGAATGCATCAAGCGTCTATGCGCAAGTTACCCCAACCACCAAATATTTGATTTGTTGCTCATCCACTACTTCTATGAAGCGCTTGACCCTAGTTATAGAAGTACTATTGATGCAACTAGTGGTGGTTCTCTAGTGAGCGAGACTCCCACTAAAGCCAAACAGCTGATATCCACATGTCAAAGAACGCCCGACATTTCGGGACTTAAGCTTCGAAATGCTAAATCAACACAAGAGAGTAGCTCTAGGATGCCACTAGAGGACATGGTCAAAAGCCTAACAAAATCCACCATGCAGATTAAGCAGAGTCAAGAGTTGTTTCAACAGACCACCACTACTCATATGAAGAGGTCTTTGTCGATGGTTGATTATTTTCGTTGGCAAAAATGGGTCTTTGTCGATAGCGTATTACATTTCATTGACATAGGCCCACCGCCGCCCGTCGTTGAAGTTCGTCGGCCTCCCATCCCCTCTCTCCCTAACCCACCACTGTTACCCATCCCCTCTCTCCCTCAGATCTGCCGGTCGCCACTCCCTCCGTCGTTGAAGCTTGGCAACTATGACGAACAGCATCATGACAAAGCGTGCAAGTTTGTTATCACAAAGAGAGAAAAGTGTTGGAGAAGAGTTGAAGGCCGTTTGAGATCTGAGGTACTGACCAAGTGGAGATTAAAGGAATTCAATGTCGGGAAGCAATTCAAGAGTCTTTCTTCCTAA

Coding sequence (CDS)

ATGCGAGTAGGGGTATCCTATGCAATGAGTTTGCATAAGACCAGACCACAAAATAAACCTTTTAAGGAGGAAAGGAGACAAATGAGAGAAGTTAGAGAACAAAGAGCTAGAGAAGAGCAAATTCATGCAGAAGGCACATTTAAGGAAGGGTTCTCTGAAGAAGAGAGAGAAGAGGAAGCGATGGCACACCATGAAGAGCGTACTCTAAGGGACCTCTTGGCTCCAAACTTGAAAGAGTTTCACATAGTGTGCGATGGCATGCGCCCCAGAGCCTTCTCGATTACGAAGGAAATTTATGACATCATGCAGATCGCTGGTGAAACCTTACACGAATACTGGGAATGCATCAAGCGTCTATGCGCAAGTTACCCCAACCACCAAATATTTGATTTGTTGCTCATCCACTACTTCTATGAAGCGCTTGACCCTAGTTATAGAAGTACTATTGATGCAACTAGTGGTGGTTCTCTAGTGAGCGAGACTCCCACTAAAGCCAAACAGCTGATATCCACATGTCAAAGAACGCCCGACATTTCGGGACTTAAGCTTCGAAATGCTAAATCAACACAAGAGAGTAGCTCTAGGATGCCACTAGAGGACATGGTCAAAAGCCTAACAAAATCCACCATGCAGATTAAGCAGAGTCAAGAGTTGTTTCAACAGACCACCACTACTCATATGAAGAGGTCTTTGTCGATGGTTGATTATTTTCGTTGGCAAAAATGGGTCTTTGTCGATAGCGTATTACATTTCATTGACATAGGCCCACCGCCGCCCGTCGTTGAAGTTCGTCGGCCTCCCATCCCCTCTCTCCCTAACCCACCACTGTTACCCATCCCCTCTCTCCCTCAGATCTGCCGGTCGCCACTCCCTCCGTCGTTGAAGCTTGGCAACTATGACGAACAGCATCATGACAAAGCGTGCAAGTTTGTTATCACAAAGAGAGAAAAGTGTTGGAGAAGAGTTGAAGGCCGTTTGAGATCTGAGGTACTGACCAAGTGGAGATTAAAGGAATTCAATGTCGGGAAGCAATTCAAGAGTCTTTCTTCCTAA

Protein sequence

MRVGVSYAMSLHKTRPQNKPFKEERRQMREVREQRAREEQIHAEGTFKEGFSEEEREEEAMAHHEERTLRDLLAPNLKEFHIVCDGMRPRAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTIDATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKSTMQIKQSQELFQQTTTTHMKRSLSMVDYFRWQKWVFVDSVLHFIDIGPPPPVVEVRRPPIPSLPNPPLLPIPSLPQICRSPLPPSLKLGNYDEQHHDKACKFVITKREKCWRRVEGRLRSEVLTKWRLKEFNVGKQFKSLSS

Homology

[Close]

BLAST of ClCG03G011210 vs. TrEMBL
Match: A0A151QLU9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_048523 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-20
Identity = 66/153 (43.14%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 76  NLKEFHIVCDGMRP-----RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFD 135
           +LKEFH+VC  M+      R  +I K I  I Q+  ETLH+YWE  KRLCAS P HQI +
Sbjct: 55  HLKEFHVVCSTMKKYFPASRTAAIRKSICGIKQMNDETLHDYWERFKRLCASCPQHQISE 114

Query: 136 LLLIHYFYEALDPSYRSTIDATSGGSLVSETPTKAKQLIST-CQRTPDISGLKLRNAKST 195
            LLI YFYE L P  RS IDA SGG+L+ +TP  AK LI+     T      +  +++S 
Sbjct: 115 QLLIQYFYEGLLPMDRSMIDAASGGALMDKTPAAAKDLIANMAANTQQFGATRGTSSRSV 174

Query: 196 QE----SSSRMPLE---DMVKSLTKSTMQIKQS 216
            E    S+    LE   D + SL +    +KQ+
Sbjct: 175 NEVQLSSTEHQRLENRLDELTSLVRGLAMMKQA 207

[Close]

BLAST of ClCG03G011210 vs. TrEMBL
Match: A0A0J8BQZ7_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204820 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.2e-18
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           R  SI KEI  I Q   ETL+EYWEC K+LCAS P HQI D LLI YFYE L P+ R  I
Sbjct: 160 RIGSIRKEICGIRQHNSETLYEYWECFKKLCASCPQHQITDQLLIQYFYEGLLPNDRGMI 219

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           D  SGG+LV +TPT+A+ LI+               A++TQ+ S+R  ++  V  +  S 
Sbjct: 220 DVASGGALVDKTPTQARNLIANM-------------AQNTQQHSTRNDVK-RVNEIDLSG 279

Query: 210 MQIKQSQELFQQTTT 225
           ++  Q QE  QQ  T
Sbjct: 280 VK-SQLQENAQQIAT 279

[Close]

BLAST of ClCG03G011210 vs. TrEMBL
Match: A0A0J8B7A3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004490 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 63/135 (46.67%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           R  SI KEI  I Q   ETL+EYWE  K+LCAS P HQI D LLI YFYE L P  R  I
Sbjct: 160 RIGSIRKEICGIRQHNSETLYEYWERFKKLCASCPQHQITDQLLIQYFYEGLLPKDRGMI 219

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DA SGG+LV +TPT+A+ LI+               A++TQ+ S+R  ++  V  +  S 
Sbjct: 220 DAASGGALVDKTPTQARNLIANM-------------AQNTQQHSTRNDVK-RVNEIDLSG 279

Query: 210 MQIKQSQELFQQTTT 225
           ++  Q QE  QQ TT
Sbjct: 280 VK-SQLQENAQQITT 279

[Close]

BLAST of ClCG03G011210 vs. TrEMBL
Match: A0A0J8BAP1_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179390 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.1e-17
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           R  SI KEI  I Q   ETL+EYWE  K+LCAS P HQI D LLI YFYE L P+ R  I
Sbjct: 160 RIGSIRKEICGIRQHNSETLYEYWERFKKLCASCPQHQITDQLLIQYFYEGLLPNDRGMI 219

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DA SGG+LV +TPT+A+ LI+               A++TQ+ S+R  ++  V  +  S 
Sbjct: 220 DAASGGALVDKTPTQARNLIANM-------------AQNTQQHSTRNDVK-RVNEIDLSG 279

Query: 210 MQIKQSQELFQQTTT 225
           ++  Q QE  QQ  T
Sbjct: 280 VK-SQLQENAQQIAT 279

[Close]

BLAST of ClCG03G011210 vs. TrEMBL
Match: A0A0J8BQF5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207510 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.1e-17
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           R  SI KEI  I Q   ETL+EYWE  K+LCAS P HQI D LLI YFYE L P+ R  I
Sbjct: 160 RIGSIRKEICGIRQHNSETLYEYWERFKKLCASCPQHQITDQLLIQYFYEGLLPNDRGMI 219

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DA SGG+LV +TPT+A+ LI+               A++TQ+ S+R  ++  V  +  S 
Sbjct: 220 DAASGGALVDKTPTQARNLIANM-------------AQNTQQHSTRNDVK-RVNEIDLSG 279

Query: 210 MQIKQSQELFQQTTT 225
           ++  Q QE  QQ  T
Sbjct: 280 VK-SQLQENAQQIAT 279

[Close]

BLAST of ClCG03G011210 vs. NCBI nr
Match: gi|720099849|ref|XP_010248059.1| (PREDICTED: uncharacterized protein LOC104590989 [Nelumbo nucifera])

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-20
Identity = 57/123 (46.34%), Postives = 72/123 (58.54%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           RA  I KEI  I Q  GE+LHEYWEC K+LCAS P+HQI + LLI YFYE L P+ RS +
Sbjct: 126 RAAIIRKEICGIRQYNGESLHEYWECFKKLCASCPHHQISEQLLIQYFYEGLQPTDRSMV 185

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DA+SGG+LV +TP  A+ LI+         G +L          +   LE  + SLT   
Sbjct: 186 DASSGGALVDKTPEAARNLIANMAANSQQFGYRLNPPSKHANEVNISSLEQQIASLTSLV 245

Query: 210 MQI 213
            Q+
Sbjct: 246 RQM 248

[Close]

BLAST of ClCG03G011210 vs. NCBI nr
Match: gi|1012317311|gb|KYP31278.1| (hypothetical protein KK1_048523 [Cajanus cajan])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-20
Identity = 66/153 (43.14%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 76  NLKEFHIVCDGMRP-----RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFD 135
           +LKEFH+VC  M+      R  +I K I  I Q+  ETLH+YWE  KRLCAS P HQI +
Sbjct: 55  HLKEFHVVCSTMKKYFPASRTAAIRKSICGIKQMNDETLHDYWERFKRLCASCPQHQISE 114

Query: 136 LLLIHYFYEALDPSYRSTIDATSGGSLVSETPTKAKQLIST-CQRTPDISGLKLRNAKST 195
            LLI YFYE L P  RS IDA SGG+L+ +TP  AK LI+     T      +  +++S 
Sbjct: 115 QLLIQYFYEGLLPMDRSMIDAASGGALMDKTPAAAKDLIANMAANTQQFGATRGTSSRSV 174

Query: 196 QE----SSSRMPLE---DMVKSLTKSTMQIKQS 216
            E    S+    LE   D + SL +    +KQ+
Sbjct: 175 NEVQLSSTEHQRLENRLDELTSLVRGLAMMKQA 207

[Close]

BLAST of ClCG03G011210 vs. NCBI nr
Match: gi|1000967872|ref|XP_015574193.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107261199, partial [Ricinus communis])

HSP 1 Score: 107.1 bits (266), Expect = 6.5e-20
Identity = 60/127 (47.24%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           RA +I KEIY I Q  GETL+EYWE  K+LCA  P+HQI   LLI YFYE L P  RS I
Sbjct: 99  RAANIRKEIYGITQFTGETLYEYWERFKQLCAKCPHHQISPQLLIQYFYEGLLPMDRSMI 158

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DA SGG+LV + P +AKQLIS         G +   A       S   LE+ +  LT   
Sbjct: 159 DAASGGALVDKMPEEAKQLISNMAENSQQFGTRADGATRRVNEVSTKNLENQISDLTALV 218

Query: 210 MQIKQSQ 217
            Q+   Q
Sbjct: 219 RQMAVEQ 225

[Close]

BLAST of ClCG03G011210 vs. NCBI nr
Match: gi|1000967872|ref|XP_015574193.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107261199, partial [Ricinus communis])

HSP 1 Score: 30.4 bits (67), Expect = 7.7e+03
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 1


Query: 76 NLKEFHIVCDGMRPRAFSITKE 98
          +LKEFHIVC GM+P    +T+E
Sbjct: 34 HLKEFHIVCSGMKPH--GVTEE 53

HSP 2 Score: 106.7 bits (265), Expect = 8.4e-20
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 1


Query: 76  NLKEFHIVCDGMRP----------RAF--------------SITKEIYDIMQIAGETLHE 135
           +LKEFH+VC GMRP          RAF              +I KEI  I Q AGE+L E
Sbjct: 116 HLKEFHVVCSGMRPQGISEEQVKLRAFPFSLADQAKDWLATTIRKEISGIRQFAGESLFE 175

Query: 136 YWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTIDATSGGSLVSETPTKAKQLIST 195
           YWE   RL  S+P+HQI + LLI YFYE L    R  IDA SGG+L  +TPT+A++LIST
Sbjct: 176 YWERFNRLVESFPHHQIPNHLLIQYFYEGLSNMDRKLIDAASGGALFDKTPTEARKLIST 235

Query: 196 CQRTPDISGLKLRN-AKSTQESSSRMPLEDMVKSLTKSTMQIKQSQEL 219
                   G++  +  + + E S  +  ED VK     ++ +++++ L
Sbjct: 236 MASNTQQFGVRHDDPPRKSNEDSIAISSEDHVKYALDESLTLEKAKIL 283

[Close]

BLAST of ClCG03G011210 vs. NCBI nr
Match: gi|720038151|ref|XP_010267895.1| (PREDICTED: uncharacterized protein LOC104604999 [Nelumbo nucifera])

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 57/123 (46.34%), Postives = 72/123 (58.54%), Query Frame = 1


Query: 90  RAFSITKEIYDIMQIAGETLHEYWECIKRLCASYPNHQIFDLLLIHYFYEALDPSYRSTI 149
           RA +I KEI  + Q  GE+LHEYWE  K+LCAS P+HQI + LLI YFYE L P+ RS I
Sbjct: 122 RAANIRKEICSVRQYNGESLHEYWERFKKLCASCPHHQISEQLLIQYFYEGLQPTDRSMI 181

Query: 150 DATSGGSLVSETPTKAKQLISTCQRTPDISGLKLRNAKSTQESSSRMPLEDMVKSLTKST 209
           DATSGG+LV +TP  A+ LI+         G +L          +   LE  + SLT   
Sbjct: 182 DATSGGALVDKTPEAARNLIANIAANSQQFGYRLDPPSKHVNEVNLSSLEQQIASLTSLV 241

Query: 210 MQI 213
            Q+
Sbjct: 242 HQM 244

The following BLAST results are available for this feature:

BLAST of ClCG03G011210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151QLU9_CAJCA	2.6e-20	43.14	Uncharacterized protein OS=Cajanus cajan GN=KK1_048523 PE=4 SV=1	[more]
A0A0J8BQZ7_BETVU	7.2e-18	45.93	Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g20...	[more]
A0A0J8B7A3_BETVU	2.1e-17	46.67	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004490 PE=4 SV=...	[more]
A0A0J8BAP1_BETVU	6.1e-17	45.93	Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g17...	[more]
A0A0J8BQF5_BETVU	6.1e-17	45.93	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207510 PE=4 S...	[more]

BLAST of ClCG03G011210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|720099849\|ref\|XP_010248059.1\|	2.2e-20	46.34	PREDICTED: uncharacterized protein LOC104590989 [Nelumbo nucifera]	[more]
gi\|1012317311\|gb\|KYP31278.1\|	3.8e-20	43.14	hypothetical protein KK1_048523 [Cajanus cajan]	[more]
gi\|1000967872\|ref\|XP_015574193.1\|	6.5e-20	47.24	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107261199, partial [R...	[more]
gi\|1000967872\|ref\|XP_015574193.1\|	7.7e+03	59.09	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107261199, partial [R...	[more]
gi\|720038151\|ref\|XP_010267895.1\|	1.4e-19	46.34	PREDICTED: uncharacterized protein LOC104604999 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G011210.1	ClCG03G011210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 21..41 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G011210	Cucumber (Gy14) v1	cgywcgB677
ClCG03G011210	Cucurbita maxima (Rimu)	cmawcgB108
ClCG03G011210	Cucurbita moschata (Rifu)	cmowcgB098
ClCG03G011210	Wild cucumber (PI 183967)	cpiwcgB041
ClCG03G011210	Cucumber (Chinese Long) v2	cuwcgB038
ClCG03G011210	Melon (DHL92) v3.5.1	mewcgB239
ClCG03G011210	Watermelon (97103) v1	wcgwmB225
ClCG03G011210	Watermelon (97103) v1	wcgwmB228
ClCG03G011210	Bottle gourd (USVL1VR-Ls)	lsiwcgB361
ClCG03G011210	Cucumber (Gy14) v2	cgybwcgB036
ClCG03G011210	Melon (DHL92) v3.6.1	medwcgB230
ClCG03G011210	Silver-seed gourd	carwcgB0890
ClCG03G011210	Cucumber (Chinese Long) v3	cucwcgB041
ClCG03G011210	Watermelon (97103) v2	wcgwmbB186