ClCG03G011030 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCGTAAGATGCTTCCATATCTATCAAAATTAGAGCTTCTAGACATATCCAATTACAAATGTTGGTCTCAAAAGCTTCTCATCTTCTTCGAGCAATTGCAAGTCGATTACATCCTCATCGCCAACAGATCTGATGAAAGTAAGGCTACTAACAAAGGTAAATGTATTGTGGTCACTGATCTGGACAATTCCAAAGTCACAAATTCGTTAGAATCTAGTCAGTCCAGATCTGAACCTGCTATGGATCTAGACAAATTTGAGAAAGATAATAAGACAATCCGTGGTCATTTGCTCAATCATATGACGGACTCGTTATTTGATCTCTTCGTGGTCCAGAAGTCAACAAAGACAATATGGGACACCCACTCTAGAATTAAGGTATGGAGGAGATGATGTAGGTCGTAAGAAGTATGTCGTTGGAAAGTGGTTGCAATGCTAGATGAAAGACGAGAAACCAATTGTAGATGAAGTGCATGAATATGAGAATCTGGTGGCGAACATTCTATCCGAAGGTATGAACATGTGCAAAGTTCTCCAAGCGAACGTACTGCTTAAGAAATTTCCATCGTCCTGGAGTGATTACAGAAATCACCAAAACACAAGAAGAAAGATTTGACACTGCAAGAATTGATCACTTGCATGCGCACGAAAGAAGCAAATTGA ATGGACCGTAAGATGCTTCCATATCTATCAAAATTAGAGCTTCTAGACATATCCAATTACAAATGTTGGTCTCAAAAGCTTCTCATCTTCTTCGAGCAATTGCAAGTCGATTACATCCTCATCGCCAACAGATCTGATGAAAGTAAGGCTACTAACAAAGGTAAATGTATTGTGGTCACTGATCTGGACAATTCCAAAGTCACAAATTCGTTAGAATCTAGTCAGTCCAGATCTGAACCTGCTATGGATCTAGACAAATTTGAGAAAGATAATAAGACAATCCGTGGTCATTTGCTCAATCATATGACGGACTCGTTATTTGATCTCTTCGTGGTCCAGAAGTCAACAAAGACAATATGGGACACCCACTCTAGAATTAAGATGAAAGACGAGAAACCAATTGTAGATGAAGTGCATGAATATGAGAATCTGGTGGCGAACATTCTATCCGAAGGTATGAACATGTGCAAAGTTCTCCAAGCGAACAAATCACCAAAACACAAGAAGAAAGATTTGACACTGCAAGAATTGATCACTTGCATGCGCACGAAAGAAGCAAATTGA ATGGACCGTAAGATGCTTCCATATCTATCAAAATTAGAGCTTCTAGACATATCCAATTACAAATGTTGGTCTCAAAAGCTTCTCATCTTCTTCGAGCAATTGCAAGTCGATTACATCCTCATCGCCAACAGATCTGATGAAAGTAAGGCTACTAACAAAGGTAAATGTATTGTGGTCACTGATCTGGACAATTCCAAAGTCACAAATTCGTTAGAATCTAGTCAGTCCAGATCTGAACCTGCTATGGATCTAGACAAATTTGAGAAAGATAATAAGACAATCCGTGGTCATTTGCTCAATCATATGACGGACTCGTTATTTGATCTCTTCGTGGTCCAGAAGTCAACAAAGACAATATGGGACACCCACTCTAGAATTAAGATGAAAGACGAGAAACCAATTGTAGATGAAGTGCATGAATATGAGAATCTGGTGGCGAACATTCTATCCGAAGGTATGAACATGTGCAAAGTTCTCCAAGCGAACAAATCACCAAAACACAAGAAGAAAGATTTGACACTGCAAGAATTGATCACTTGCATGCGCACGAAAGAAGCAAATTGA MDRKMLPYLSKLELLDISNYKCWSQKLLIFFEQLQVDYILIANRSDESKATNKGKCIVVTDLDNSKVTNSLESSQSRSEPAMDLDKFEKDNKTIRGHLLNHMTDSLFDLFVVQKSTKTIWDTHSRIKMKDEKPIVDEVHEYENLVANILSEGMNMCKVLQANKSPKHKKKDLTLQELITCMRTKEAN
BLAST of ClCG03G011030 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 5.9e-43 Identity = 105/221 (47.51%), Postives = 133/221 (60.18%), Query Frame = 1
BLAST of ClCG03G011030 vs. TrEMBL
Match: V4MRG2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10027475mg PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.8e-08 Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 1
BLAST of ClCG03G011030 vs. TrEMBL
Match: A0A0S3SC24_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.06G161800 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.2e-07 Identity = 47/216 (21.76%), Postives = 86/216 (39.81%), Query Frame = 1
BLAST of ClCG03G011030 vs. TrEMBL
Match: A0A0S3RG96_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.02G242200 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.6e-06 Identity = 45/208 (21.63%), Postives = 82/208 (39.42%), Query Frame = 1
BLAST of ClCG03G011030 vs. NCBI nr
Match: gi|659113205|ref|XP_008456453.1| (PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 2.9e-43 Identity = 104/219 (47.49%), Postives = 134/219 (61.19%), Query Frame = 1
BLAST of ClCG03G011030 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 182.2 bits (461), Expect = 8.4e-43 Identity = 105/221 (47.51%), Postives = 133/221 (60.18%), Query Frame = 1
BLAST of ClCG03G011030 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo]) HSP 1 Score: 178.3 bits (451), Expect = 1.2e-41 Identity = 106/229 (46.29%), Postives = 135/229 (58.95%), Query Frame = 1
BLAST of ClCG03G011030 vs. NCBI nr
Match: gi|698485788|ref|XP_009789656.1| (PREDICTED: uncharacterized protein LOC104237252 [Nicotiana sylvestris]) HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40 Identity = 103/217 (47.47%), Postives = 128/217 (58.99%), Query Frame = 1
BLAST of ClCG03G011030 vs. NCBI nr
Match: gi|747058586|ref|XP_011075636.1| (PREDICTED: uncharacterized protein LOC105160070 [Sesamum indicum]) HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40 Identity = 106/217 (48.85%), Postives = 130/217 (59.91%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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