ClCG03G010100 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G010100
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionAcetolactate synthase small subunit
LocationCG_Chr03 : 17232063 .. 17236636 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATGGCTTCTGCAGGTGCGGGATCTAACTCACTTGCCATTTGCTGAGAGAGAATTAATGTTGATAAAAATTGCAGCAAATGCTGCTGCCCGTAGGGATGTCCTCGATATTGCTGACATCTTCCGTGCAAAAGCTGTTGATGTGTCCGGTCATACAATTACTCTTCAGGTAATCTCCTTTCCTTAATGTTGCATAGAGAATTGTGCAGGAATGCATATAATTTGATATCTGTGTGTTTAAGACTATTGGAATATGTGCATATATATATATATATATATATATATATTTTGCACGGTTGTGTACATGTTATTGTAAATTTATTAATGGCAGCAGAGCAGCAAGTGGGAGTCTTTTCCTCTAAAGTCTAAACTAATTCACTGATTTAAGAAATACTACAATTTCCAGCTCAATTTAGGGTTGAAGTTCAGTTTAATCACACCAATACTGATGTAAGACGGCTTTGAGCATGGGATGGATTTTTTTTATTTTATTTTATTCTTTTTCTGTATCCATTTTTCTATAAGTTAATTATTGTAGCAAAAGTAGAGGAGGAAAAAGTTCTTTGTAATGATGATTGTGCTACACACGGAAATTTGTGACAAATTAAGAGGATTCTTGTTCCCCAGAGATCAGCTCTGTAAAGGGGGAAAAAGATGCACTAGAGTGTTCTTTTCCCTTGAATTTAAGCGCATTAGTGTGATTGACGTTAATGGTATGCCAAAGCGTAACATCTCTCTAGTACAAGTACCAAGAGTCAGAATAGTAGATTGTTTCGATTGTTTTATATGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCTCTCTCTCTCTCTCTTTTAATTATCTTTTTATCTGGCTATTCTTATGCTACAATTTTTCATATTTCCTCCAGCTCACTGGTGATTTAAACAAGATGGTTGCATTGCAGCGGTTACTAGAGCCATTCGGGATATGCGAGGTTTGTATTCTTGATTTGGTCACTTGTAGATTATAGCAGTTGGAGATAGAATTCCGGTTAGGGGTTTTGTAAAAATCAGATATTTGACCACGATATGCTTCTTATAAGAGTTCATTAGTAATTTGTCCCTCATTCGAAAGGGTTTATCTCCAATTCTTAATCTTACCTGAAGACTCCAGATGTCATATATATCAAACAAGGAAGTAAATTTGCTAAAATAATGACTTCTATACATAATTAAAATTCTCTCATCTAGAAGTTAAAAGCTTTAGGTCCTATTTGGTAACTATTTAATTTTTTGTTTTTGAAAATTAAGCTTATAAATACTACTTTCACTTGTTGATTTCTTTGTTTTGTTATCTACACTTTTAAGAGTGTTTTCAATAACCAAACCAAGTTCTGAAAATTAAAAAAAGTTGTTTTTGTTTTTAGAATTTAATCAATGAAAAGTTTTGTTTTTGTTTAGAAAAATGCTTTTGTCTTCGGAGTGTAACTAAGAATTCAAATCTTTAGTTAGGAATGTTGAAAACCACGGTAAAAGAAGCAGTAAGAAAACAAACACAAATTTCGAAAACTAAAAATCAAATACTTATCAAATCTAAATTAATCTCCGAAAGAATAGAATTAGTCTTACCTTAAAATTGCGGGGTGTCACAATTTGGAGACACTGTGTAGAGGTTGTACACAAATATCGTTGTCCTGATACTATCTTAAACTATTATTAAACCTAAAATCTTATGGATTGTGATATATTATGAATTGTGGTATATTTAATATTTTATTTGCATTGTTAACGTTTTTTGTTCGAGTGCAACAATTGCAAAGGTGAGTGAATTGAAACATCAATATCTGAATTGCTAATTGACGCCTTTGTCAATTAAGCTATGCTTGTAGTTGCCTAATGCTGAATTTCTCTTTTCTTTATCTGTAGGTGGCAAGGACAGGAAGGGTGGCGTTGGGAAGAGAATCAGGTGTGGACTCGGCATATCTTCGGGGTTATTCCCTTCCAATCTAAGTCCCAGTTAATTGATGTAAGTTTTTCTACGCCTTGTTCTTTGTATTAGGCTCTTCCACCATGAATGTTGAAGCAATATTAATCTGTGGACTGAGGGAATATCTTTAGCGTAGAATTAATGAATAGTATTAAGATAGTAGAAGCATTATTATAGGGTATTGTTTATTAAAAAAAAGGGAAATTATCTTAAATGACAAAATTGCTAAAAATATTTACAAATAATAGCAAAATATCAGTCATTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTAAAATATCAGTCTATTTGTGATAGACCTCGATAGATTGCAATAGACATAGATGTCTATCACAATCTATCGCGGTCTATCAAAGATAGACAGTAAAATTTTGTTATATTTGTAAATATTTTAAATCATTTTCCTATATTTGAAAATAGCCCTTAAAAAAAATTAAATTATCTATTGATATCTCGATATATTTGTAAATTGAAGAGTTTGACATTTATATATAGTCCATTTATATTTTCCATCTGTCATATAAATATCAAGGAAATATATAAAAGAGGAAAGATTACACTTTTGGTTCCCAAGGTTTGAAGTTTGTTTCGAATTGGTCTCTGAGTTTCAAAAGCATACAATCAAGTGCTCAATATTCAAGAAATGTTCGATTTTAGTCCCTCAATTAACAGTTGTATTAACTCCAAATATCTTCATGCTGGCATGGCAATAATATTATTATTATTATTATTATTATTATTAAATATACTTTTTGTTTTTTAAAAAAAACTTCCTAACCCTTCATCCCATCGGACTCCCTCCATTTTTTTTTCAGATTCAGACTTCCTCCACCATTTTTATTATTTATTTTTCTATTCGGCTTCCCCCACCCCCCTCTGTTTTTTTCCCCCCCTAGATTCACACCCCCACCTTTTCTTTTCCTTCAGTTTCGTACATCCCCACCCTTTATTTATTATTATTATTAGGCCTTTTTCCAATTCTTCCTTTTATTTTTTTCCAAATCCGGGCTTCCTTCATTTCAAATGTGTTGATGTGGTTTGAGTCTTGTGGGTTTGACATTGAGTCAACTTGTGCTGCTGATGGTAGTTGCAGGAAAAGTGAGGAAGGTGGTCGGAGAGAAAATGAACGAAAGAATGAAGAAGGGAAAACGAAGAAAGGAGGGGTGGTTGGTTTATGGATTTGTTTTTTTTGCAGTTTCAGATTTGAGGGAAGGGTTATTGGATTTGTGGTGGTGGCGATTGCCGGTGACGACAACAACTTCGTGGGAAGGAGAGTTGAAGGGGAGGGAAAGGGAAGAGTAGGGGATGAAGGAGAAGAGAGGGTTATTGTATTGTTTTAAAAAATTGCCACGCCAGCTCCTCTATTAATATTTAACGGATTCTGTTAGTAGAGGACTAAAATAGAGCATGTTCTAAATTTTAGAGACTTGATTGTTCAATTTCGCAATCAATTTCGAAGCTTAAGGACCAGTTTGAAATTAAAAATGTAATTTTTCCAGAAAAAAATATTATTAGTCAACATAGGTTTTATAACAGAAGAACTAAAATAATTTATTTATTAATCAAAATAATTTGAATAAGTATTTCTTGGTTCACAAAACTATCCATGGATGTTTATCAATATTTATTAATACTCATCCATAAAATTGAGATCATCGATATCAATATTTTAATTTTTGGTAATGAATACAGTAGAGGTTCAGTTTTTTGAATGTCTTCAACTTCAATTAGGAAAGGTCGAAGTACAGTGAATACCTGTTAGTAACTTATTATATGTCTTGCTAATCTTTGATGCAATTTCCTTTGCATATTAGATCTCGTACACTCGACGGACTTGATTTGAAGTTGGATTGTAAATGAAGCTGGTTGCAGCACAAACTCAGATTTCAAAGATGGTGGGTGATGGTTTCTACTCTGTAGCAAAAACCTATAAGTTTGAGGCATTTTAATTGTATTTTAGTCCCTCTTGGCTTAAGAATATTTCTAAATTAGTTTGTTAAATAAGTGACAAGTAGTGGAAGTACATTCTTGCTGTACCAATGGTAGTAGTATTATGTTAGCCAATTGTACTTCTAGTTGTTCAAGGGAGATTCTAAACTAGTAATCAACTAGTTGAACTTTCTTTTTGTAATACTATTCTAAATGATTAAGT

mRNA sequence

GGATGGCTTCTGCAGGTGCGGGATCTAACTCACTTGCCATTTGCTGAGAGAGAATTAATGTTGATAAAAATTGCAGCAAATGCTGCTGCCCGTAGGGATGTCCTCGATATTGCTGACATCTTCCGTGCAAAAGCTGTTGATGTGTCCGGTCATACAATTACTCTTCAGCTCACTGGTGATTTAAACAAGATGGTTGCATTGCAGCGGTTACTAGAGCCATTCGGGATATGCGAGGTGGCAAGGACAGGAAGGGTGGCGTTGGGAAGAGAATCAGGTGTGGACTCGGCATATCTTCGGGGTTATTCCCTTCCAATCTAAGTCCCAGTTAATTGATATCTCGTACACTCGACGGACTTGATTTGAAGTTGGATTGTAAATGAAGCTGGTTGCAGCACAAACTCAGATTTCAAAGATGGTGGGTGATGGTTTCTACTCTGTAGCAAAAACCTATAAGTTTGAGGCATTTTAATTGTATTTTAGTCCCTCTTGGCTTAAGAATATTTCTAAATTAGTTTGTTAAATAAGTGACAAGTAGTGGAAGTACATTCTTGCTGTACCAATGGTAGTAGTATTATGTTAGCCAATTGTACTTCTAGTTGTTCAAGGGAGATTCTAAACTAGTAATCAACTAGTTGAACTTTCTTTTTGTAATACTATTCTAAATGATTAAGT

Coding sequence (CDS)

GGATGGCTTCTGCAGGTGCGGGATCTAACTCACTTGCCATTTGCTGAGAGAGAATTAATGTTGATAAAAATTGCAGCAAATGCTGCTGCCCGTAGGGATGTCCTCGATATTGCTGACATCTTCCGTGCAAAAGCTGTTGATGTGTCCGGTCATACAATTACTCTTCAGCTCACTGGTGATTTAAACAAGATGGTTGCATTGCAGCGGTTACTAGAGCCATTCGGGATATGCGAGGTGGCAAGGACAGGAAGGGTGGCGTTGGGAAGAGAATCAGGTGTGGACTCGGCATATCTTCGGGGTTATTCCCTTCCAATCTAA

Protein sequence

GWLLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLNKMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI
Homology
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BLAST of ClCG03G010100 vs. Swiss-Prot
Match: ILVH2_ARATH (Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-43
Identity = 89/101 (88.12%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 5   QVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLNKM 64
           +V DLTHLPF+ERELMLIKIA NAAARRDVLDIA IFRAKAVDVS HTITLQLTGDL+KM
Sbjct: 389 EVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLQLTGDLDKM 448

Query: 65  VALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           VALQRLLEP+GICEVARTGRVAL RESGVDS YLRGYS P+
Sbjct: 449 VALQRLLEPYGICEVARTGRVALARESGVDSKYLRGYSFPL 489


HSP 2 Score: 86.7 bits (213), Expect = 1.7e-16
Identity = 39/88 (44.32%), Postives = 64/88 (72.73%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+V D++  P  ERELML+K+ A+  +R +++ + D FRA+ VD++ H +T+++TGD  
Sbjct: 152 VLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGDPG 211

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRE 91
           KM+A++R L+ F I E+ RTG++AL RE
Sbjct: 212 KMIAVERNLKKFQIREIVRTGKIALRRE 239

[Close]
BLAST of ClCG03G010100 vs. Swiss-Prot
Match: ILVH1_ARATH (Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=VAT1 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-38
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +++++TH+PFAERELMLIK+AA+ +ARRDVLDIA +FRAKA+DVS HTITL++TGDL 
Sbjct: 375 LQEIQNITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTITLEVTGDLR 434

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KM ALQ  LE +GICEVARTGRVAL RESGVDS YLRGYSLP+
Sbjct: 435 KMSALQTQLEAYGICEVARTGRVALVRESGVDSTYLRGYSLPL 477


HSP 2 Score: 92.4 bits (228), Expect = 3.1e-18
Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V DL+  P  ERELMLIK+ A+ + R +++ + DIFRAK VD S  ++T+++TGD  
Sbjct: 142 VIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTIEVTGDPG 201

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSA 97
           KMVAL   LE FGI E+ARTG++AL RE   ++A
Sbjct: 202 KMVALTTNLEKFGIKEIARTGKIALRREKMGETA 235

[Close]
BLAST of ClCG03G010100 vs. Swiss-Prot
Match: ILVH_NICPL (Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-31
Identity = 68/78 (87.18%), Postives = 72/78 (92.31%), Query Frame = 1 

Query: 5   QVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLNKM 64
           +VRD+THLPFAERELMLIKIA NAAARR+VLDIA IFRAKAVDVS HTITL+LTGDL+KM
Sbjct: 327 EVRDITHLPFAERELMLIKIAVNAAARRNVLDIASIFRAKAVDVSDHTITLELTGDLHKM 386

Query: 65  VALQRLLEPFGICEVART 83
           V LQRLLEP+GICEVART
Sbjct: 387 VRLQRLLEPYGICEVART 404


HSP 2 Score: 96.3 bits (238), Expect = 2.1e-19
Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V DL+  P  ERELMLIKI+A+   R +V+ + D+FRAK VD+S  ++T+++TGD  
Sbjct: 90  VIKVEDLSKEPQVERELMLIKISADPKYRAEVMWLVDVFRAKIVDISDQSLTIEVTGDPG 149

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSA 97
           KMVA+QR L  FGI E+ARTG++AL RE   +SA
Sbjct: 150 KMVAVQRNLSKFGIREIARTGKIALRREKMGESA 183

[Close]
BLAST of ClCG03G010100 vs. Swiss-Prot
Match: ILVH_SYNY3 (Acetolactate synthase small subunit OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ilvH PE=3 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 4.2e-23
Identity = 50/97 (51.55%), Postives = 75/97 (77.32%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V+D+T  P  ERELML+K++ANA  R +V+++A +FRA+ VD+S  T+T+++ GD  
Sbjct: 70  VIKVQDITETPCVERELMLVKVSANAPNRAEVIELAQVFRARIVDISEDTVTIEVVGDPG 129

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLR 100
           KMVA+ ++L  FGI EVARTG++AL RESGV++ YL+
Sbjct: 130 KMVAILQMLAKFGIKEVARTGKIALVRESGVNTEYLK 166

[Close]
BLAST of ClCG03G010100 vs. Swiss-Prot
Match: ILVH_GALSU (Acetolactate synthase small subunit OS=Galdieria sulphuraria GN=ilvH PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.0e-22
Identity = 48/97 (49.48%), Postives = 74/97 (76.29%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+++D+T++P  ERELMLIK+      R ++L+IA+IFRA+ VD+S   I L++TGD  
Sbjct: 70  VLKIQDITNIPCVERELMLIKVKTGENKRNEILEIANIFRARVVDLSESFIILEITGDPG 129

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLR 100
           K+ A+++LLE +GICE+ARTG++AL RES +++  LR
Sbjct: 130 KIAAIEKLLEKYGICEIARTGKIALTRESKINTEILR 166

[Close]
BLAST of ClCG03G010100 vs. TrEMBL
Match: A0A0A0M018_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652220 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.7e-45
Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLTHLPFAERELMLIKIAANA ARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN
Sbjct: 116 LHEVRDLTHLPFAERELMLIKIAANATARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 175

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEPFGICEVARTGRVAL RESGVDSAYLRGY LPI
Sbjct: 176 KMVALQRLLEPFGICEVARTGRVALERESGVDSAYLRGYPLPI 218

[Close]
BLAST of ClCG03G010100 vs. TrEMBL
Match: A0A061EHR8_THECC (ACT domain-containing small subunit of acetolactate synthase protein OS=Theobroma cacao GN=TCM_047047 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.8e-42
Identity = 91/103 (88.35%), Postives = 98/103 (95.15%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLT+LPFAERELMLIKIA NAAARRDVLDIA+IFRAKAVDVSGHTITL+LTGDL+
Sbjct: 376 LHEVRDLTYLPFAERELMLIKIAVNAAARRDVLDIANIFRAKAVDVSGHTITLELTGDLD 435

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGRVAL RESGVDS YLRGYS P+
Sbjct: 436 KMVALQRLLEPYGICEVARTGRVALVRESGVDSKYLRGYSFPV 478

[Close]
BLAST of ClCG03G010100 vs. TrEMBL
Match: A0A061EHR8_THECC (ACT domain-containing small subunit of acetolactate synthase protein OS=Theobroma cacao GN=TCM_047047 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-15
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 1 

Query: 5   QVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLNKM 64
           +V DL++ P  ERELMLIK+ A+     ++  + DIFRA+ VD+S H++T+++TGD  KM
Sbjct: 143 KVEDLSNEPQVERELMLIKVNADPKFGAEIKWLVDIFRAQIVDISEHSLTIEVTGDPGKM 202

Query: 65  VALQRLLEPFGICEVARTGRVALGRE 91
           VA+QR L  FGI E+ARTG++AL RE
Sbjct: 203 VAVQRNLSKFGIKEIARTGKIALRRE 228


HSP 2 Score: 178.3 bits (451), Expect = 4.8e-42
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRD+THLPFAERELMLIKIA NAAARRDVLDIA IFRAKAVDVSGHTITL+LTGDL+
Sbjct: 369 LHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSGHTITLELTGDLD 428

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGR+AL RESGVDS YLRGYS P+
Sbjct: 429 KMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSYPL 471

[Close]
BLAST of ClCG03G010100 vs. TrEMBL
Match: A0A0B2SV05_GLYSO (Acetolactate synthase small subunit OS=Glycine soja GN=glysoja_015557 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-16
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+V DL+  P  ERELMLIK+ A+     ++  + DIFRAK VD+S H++T+++TGD  
Sbjct: 134 VLKVEDLSREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISQHSVTIEVTGDPG 193

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYS 103
           KM A+QR    FGI E+ARTG++AL RE    SA    YS
Sbjct: 194 KMAAVQRNFSKFGIKEIARTGKIALRREKMGASAPFWRYS 233


HSP 2 Score: 178.3 bits (451), Expect = 4.8e-42
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRD+THLPFAERELMLIKIA NAAARRDVLDIA IFRAKAVDVSGHTITL+LTGDL+
Sbjct: 372 LHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSGHTITLELTGDLD 431

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGR+AL RESGVDS YLRGYS P+
Sbjct: 432 KMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSYPL 474

[Close]
BLAST of ClCG03G010100 vs. TrEMBL
Match: I1KSP9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G126100 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-16
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+V DL+  P  ERELMLIK+ A+     ++  + DIFRAK VD+S H++T+++TGD  
Sbjct: 137 VLKVEDLSREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISQHSVTIEVTGDPG 196

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYS 103
           KM A+QR    FGI E+ARTG++AL RE    SA    YS
Sbjct: 197 KMAAVQRNFSKFGIKEIARTGKIALRREKMGASAPFWRYS 236


HSP 2 Score: 177.6 bits (449), Expect = 8.1e-42
Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLTHLPFAERELMLIKIA NAAARRDVLDIA IFRAKAVDVS HTITL+LTGDL+
Sbjct: 391 LHEVRDLTHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLELTGDLD 450

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGR+AL RESGVDS YLRGYS PI
Sbjct: 451 KMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSFPI 493

[Close]
BLAST of ClCG03G010100 vs. TAIR10
Match: AT2G31810.1 (AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-44
Identity = 89/101 (88.12%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 5   QVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLNKM 64
           +V DLTHLPF+ERELMLIKIA NAAARRDVLDIA IFRAKAVDVS HTITLQLTGDL+KM
Sbjct: 389 EVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLQLTGDLDKM 448

Query: 65  VALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           VALQRLLEP+GICEVARTGRVAL RESGVDS YLRGYS P+
Sbjct: 449 VALQRLLEPYGICEVARTGRVALARESGVDSKYLRGYSFPL 489


HSP 2 Score: 86.7 bits (213), Expect = 9.6e-18
Identity = 39/88 (44.32%), Postives = 64/88 (72.73%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+V D++  P  ERELML+K+ A+  +R +++ + D FRA+ VD++ H +T+++TGD  
Sbjct: 152 VLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGDPG 211

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRE 91
           KM+A++R L+ F I E+ RTG++AL RE
Sbjct: 212 KMIAVERNLKKFQIREIVRTGKIALRRE 239

[Close]
BLAST of ClCG03G010100 vs. TAIR10
Match: AT5G16290.1 (AT5G16290.1 VALINE-TOLERANT 1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-39
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +++++TH+PFAERELMLIK+AA+ +ARRDVLDIA +FRAKA+DVS HTITL++TGDL 
Sbjct: 375 LQEIQNITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTITLEVTGDLR 434

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KM ALQ  LE +GICEVARTGRVAL RESGVDS YLRGYSLP+
Sbjct: 435 KMSALQTQLEAYGICEVARTGRVALVRESGVDSTYLRGYSLPL 477


HSP 2 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V DL+  P  ERELMLIK+ A+ + R +++ + DIFRAK VD S  ++T+++TGD  
Sbjct: 142 VIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTIEVTGDPG 201

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSA 97
           KMVAL   LE FGI E+ARTG++AL RE   ++A
Sbjct: 202 KMVALTTNLEKFGIKEIARTGKIALRREKMGETA 235

[Close]
BLAST of ClCG03G010100 vs. NCBI nr
Match: gi|659085884|ref|XP_008443657.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-45
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN
Sbjct: 378 LHEVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 437

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEPFGICEVARTGRVAL RESGVDSAYLRGY LPI
Sbjct: 438 KMVALQRLLEPFGICEVARTGRVALERESGVDSAYLRGYPLPI 480

[Close]
BLAST of ClCG03G010100 vs. NCBI nr
Match: gi|659085884|ref|XP_008443657.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-15
Identity = 41/94 (43.62%), Postives = 70/94 (74.47%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V D++  P  EREL+L+K+ A+++ R +++ + DIFR K VD+S H++T+++TGD  
Sbjct: 144 VIKVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPG 203

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSA 97
           K+VA++R    FGI E+ARTG++AL RE   ++A
Sbjct: 204 KLVAVERNFSKFGIRELARTGKIALRREKMGETA 237


HSP 2 Score: 189.1 bits (479), Expect = 3.9e-45
Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLTHLPFAERELMLIKIAANA ARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN
Sbjct: 378 LHEVRDLTHLPFAERELMLIKIAANATARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 437

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEPFGICEVARTGRVAL RESGVDSAYLRGY LPI
Sbjct: 438 KMVALQRLLEPFGICEVARTGRVALERESGVDSAYLRGYPLPI 480

[Close]
BLAST of ClCG03G010100 vs. NCBI nr
Match: gi|449442655|ref|XP_004139096.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15
Identity = 41/94 (43.62%), Postives = 70/94 (74.47%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +++V D++  P  EREL+L+K+ A+++ R +++ + DIFR K VD+S H++T+++TGD  
Sbjct: 144 VIKVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPG 203

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSA 97
           K+VA++R    FGI E+ARTG++AL RE   ++A
Sbjct: 204 KLVAVERNFSKFGIRELARTGKIALRREKRGETA 237


HSP 2 Score: 189.1 bits (479), Expect = 3.9e-45
Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLTHLPFAERELMLIKIAANA ARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN
Sbjct: 116 LHEVRDLTHLPFAERELMLIKIAANATARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 175

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEPFGICEVARTGRVAL RESGVDSAYLRGY LPI
Sbjct: 176 KMVALQRLLEPFGICEVARTGRVALERESGVDSAYLRGYPLPI 218

[Close]
BLAST of ClCG03G010100 vs. NCBI nr
Match: gi|356528404|ref|XP_003532793.1| (PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Glycine max])

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-42
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRD+THLPFAERELMLIKIA NAAARRDVLDIA IFRAKAVDVSGHTITL+LTGDL+
Sbjct: 372 LHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSGHTITLELTGDLD 431

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGR+AL RESGVDS YLRGYS P+
Sbjct: 432 KMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSYPL 474

[Close]
BLAST of ClCG03G010100 vs. NCBI nr
Match: gi|356528404|ref|XP_003532793.1| (PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Glycine max])

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-15
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           +L+V DL+  P  ERELMLIK+ A+     ++  + DIFRAK VD+S H++T+++TGD  
Sbjct: 137 VLKVEDLSREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISQHSVTIEVTGDPG 196

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYS 103
           KM A+QR    FGI E+ARTG++AL RE    SA    YS
Sbjct: 197 KMAAVQRNFSKFGIKEIARTGKIALRREKMGASAPFWRYS 236


HSP 2 Score: 178.3 bits (451), Expect = 6.9e-42
Identity = 91/103 (88.35%), Postives = 98/103 (95.15%), Query Frame = 1 

Query: 3   LLQVRDLTHLPFAERELMLIKIAANAAARRDVLDIADIFRAKAVDVSGHTITLQLTGDLN 62
           L +VRDLT+LPFAERELMLIKIA NAAARRDVLDIA+IFRAKAVDVSGHTITL+LTGDL+
Sbjct: 376 LHEVRDLTYLPFAERELMLIKIAVNAAARRDVLDIANIFRAKAVDVSGHTITLELTGDLD 435

Query: 63  KMVALQRLLEPFGICEVARTGRVALGRESGVDSAYLRGYSLPI 106
           KMVALQRLLEP+GICEVARTGRVAL RESGVDS YLRGYS P+
Sbjct: 436 KMVALQRLLEPYGICEVARTGRVALVRESGVDSKYLRGYSFPV 478

The following BLAST results are available for this feature:
BLAST of ClCG03G010100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ILVH2_ARATH2.1e-4388.12Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH1_ARATH4.6e-3874.76Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH_NICPL3.2e-3187.18Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifoli... [more]
ILVH_SYNY34.2e-2351.55Acetolactate synthase small subunit OS=Synechocystis sp. (strain PCC 6803 / Kazu... [more]
ILVH_GALSU6.0e-2249.48Acetolactate synthase small subunit OS=Galdieria sulphuraria GN=ilvH PE=3 SV=1[more]
BLAST of ClCG03G010100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M018_CUCSA2.7e-4595.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652220 PE=4 SV=1[more]
A0A061EHR8_THECC4.8e-4288.35ACT domain-containing small subunit of acetolactate synthase protein OS=Theobrom... [more]
A0A061EHR8_THECC2.2e-1552.33ACT domain-containing small subunit of acetolactate synthase protein OS=Theobrom... [more]
A0A0B2SV05_GLYSO7.7e-1649.00Acetolactate synthase small subunit OS=Glycine soja GN=glysoja_015557 PE=4 SV=1[more]
I1KSP9_SOYBN7.7e-1649.00Uncharacterized protein OS=Glycine max GN=GLYMA_08G126100 PE=4 SV=1[more]
BLAST of ClCG03G010100 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31810.11.2e-4488.12 ACT domain-containing small subunit of acetolactate synthase protein[more]
AT5G16290.12.6e-3974.76 VALINE-TOLERANT 1[more]
BLAST of ClCG03G010100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085884|ref|XP_008443657.1|1.3e-4596.12PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis me... [more]
gi|659085884|ref|XP_008443657.1|3.2e-1543.62PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis me... [more]
gi|449442655|ref|XP_004139096.1|2.5e-1543.62PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sa... [more]
gi|356528404|ref|XP_003532793.1|6.9e-4287.38PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Glycine ma... [more]
gi|356528404|ref|XP_003532793.1|1.1e-1549.00PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Glycine ma... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004789Acetalactate_synth_ssu
IPR019455Acetolactate_synth_ssu_C
Vocabulary: Molecular Function
TermDefinition
GO:0003984acetolactate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0009082 branched-chain amino acid biosynthetic process
cellular_component GO:0005948 acetolactate synthase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0003984 acetolactate synthase activity
molecular_function GO:0016597 amino acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G010100.1ClCG03G010100.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004789Acetolactate synthase, small subunitTIGRFAMsTIGR00119TIGR00119coord: 4..90
score: 9.5
IPR019455Acetolactate synthase, small subunit, C-terminalPFAMPF10369ALS_ss_Ccoord: 17..89
score: 2.9
NoneNo IPR availableGENE3DG3DSA:3.30.70.1150coord: 16..94
score: 2.5
NoneNo IPR availablePANTHERPTHR30239ACETOLACTATE SYNTHASE III, REGULATORY SUBUNITcoord: 3..105
score: 5.5
NoneNo IPR availablePANTHERPTHR30239:SF6ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTICcoord: 3..105
score: 5.5
NoneNo IPR availableunknownSSF55021ACT-likecoord: 13..91
score: 4.43

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G010100Csa1G652220Cucumber (Chinese Long) v2cuwcgB038
ClCG03G010100Cla001075Watermelon (97103) v1wcgwmB225
ClCG03G010100Cla97C03G060930Watermelon (97103) v2wcgwmbB186
ClCG03G010100CSPI01G31970Wild cucumber (PI 183967)cpiwcgB041
ClCG03G010100Lsi06G006710Bottle gourd (USVL1VR-Ls)lsiwcgB361
ClCG03G010100CsGy1G030970Cucumber (Gy14) v2cgybwcgB036
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G010100Wax gourdwcgwgoB369
ClCG03G010100Cucumber (Gy14) v1cgywcgB605
ClCG03G010100Cucumber (Chinese Long) v3cucwcgB041