ClCG03G009980 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTGACTAAGTTCTCTCCTTCCCCTTCCATATTCTTTCTTGACTCAATCTCGTCTCTCTCACAACATCTAGGGCACGCCCTGCTTGAGATCTCTCCTTCCCCTTCCATCTTCTTCATTTTCCCCAATCTCTCTCTCTCTCAGCTTCATCGCTTCAAAAATCGGCTCAATCTGACGGCTCCTTGATTCTGTACATCTATTTTCATCGGTATGTCTTTTGTCTCTGTCTCTCTATCCCTAACTGTTAATTGCTGGCTGTTTCTTTCTCTCAATTCAAATGGAATCTCATGGTGTAGGCTGTTGAAATGTGTCTCAGCACTTATTGCGTTTGGTAGAATCAGTGGAAAATTGAGGGATGTGTTCACTTGAATTTGTTATTTTTATGCCACCATATTTTCTGTTCTAGTTTCCTAGTAATTGACTAATTTGTTATTGTTATTATGTCACTCCTGTTGGTTATTGTCCGCGCCTGCTTAATGGGTAATTTTTTGTTTGACTTGTGAAAAGTTTGCTAAATTTGTAGGTTTGTGATGGGATTTGTTCTTTGTTTGTTGAATTGGTGATTGTTGGGCTGGATTTTGAATACTTAATGATTTATTCATGGTTGTTGTATCTGTAGTTGTGAATTTTGTTGCTAAATTACTTCTGAGCAAAACAATGCTCGTCCCAATCCAATGCAATCCTATGGGGATGGGATCGGTTTGCTAATTTGGTGTTAATCAGTAGAATTTAGTGCTGTTAACTCTCGATTTATGTTGTTTCATTCTATTTTACTGTGCTTTGTCAATTTTCTGTTTTTCCTCCTTTCTTTGATGGACATGTATGTGCTGTAAAGCTGCCTATATATTGCAGCCTCTTTAGTCTGTTTTGGAATATATCAGAGAATACCTATTCTGCACTCTTTTTCTTCTTCTCACTTAATATTAGGGTTTTATACCCTTTTATAGTATTAGAACCCATAAAACCCAAACGAGCATTCGGTTTAAAAAATAAAAATTAAGGTCCAATCCAAGAATGATGAACCAGAAGAGGCACCATCTTGATGGGCACATTGAGGACCTACATTGAAGCTAGGGACCTCACAATGTTTATAAGATAGAAAGCCTATTCCTCTCATTGCTATTACTTTTGAGTTTGAATTCCATATTATGTTTAATTGGGAAAATGATTTCTTGTGGGCATTTTGGTCTTAAAAGGCTTCAGATTGATTCTTCCCAACCTTGTATCCTTCACACGTCCTACATGCCAAAAATATGATTCTCTTGGATATATATTTCTAAAATTCTGGAAACACCAATATGCCCAGACACGGGATACAAACAATTCAACCTGAAAAAAGGACTCGAATTTTTTTTTAAAAAAGAACATTTAATTTGAGCCTTTTACAATGCTAGCTGCTGAACCTATTGCTAGGTAGAACCGAACACTAAAACCTTAACTTGGGCCTAAAACACCAAATGATAGAAGAAAAAGAAACCTCACACTGCTGCTTATTTCTCCGCCACGAGTGCATGTCAATAGATACATGTATATATTTTGAAAAACATATCTCGAAGCTGTTCGTGTCCTACATTTTGTTGTTGTTCATGTTTGTGGTCCTCTTTGTCTTTGTGCACGTGTCTGTGTTTGTGTCTGTGTCCACATTAGGAAACTAGATTTTGATTCAATATGGATGCAGTTTGATTTAATTCTGTGTATAATATATGGTTCAATTGATTTGGGAACATATTAGTCCATTGCAGTTAGAAGATGGCAACAAAATACATAGTAGCTTCTTTATTTGGTGCAACTGCAGTTGTATATATCTTTGACCATCTTATTGCTGACAAGAAAATATTTGAAGGTAATCATCGGTTATCATTTGGTCTTGCAGTTTCTTTGATTTGCTACTGCTACCCTTGCTTGGCAAATGATAAAAGTGATTTAAAAGTCATGATTAGTGGTGTTCAAATGACCCGACAACCCAACTCTGGGTTAATTTTAAATTTGGGTTGGGTTGGGTTAAAATTATATGTTTTTTTGGGTTGACCCAACCCAACCTGAATTACTAATATTAATATATATGTGTATATATATATACACGTATATATATTTTTGAGAAAAAAAAAAAAAGAAACTCACACACATGATAGCCTTTCAGATTTTAGGGTTTTTTCATTTTTGTCTTAAGTTAGCCATTCGCCTATCCCTCTCCTTCTGCCTTGCTGCTCGCTCTCACCTCTCTCTTTCCTTTCGTCTCTTGTTAACGACTCACTCTATGGCAGCTCCGTTCGGCATTCAGCGTTTGACTCTAGCTCCATTTGGCGTCTGACTCTAGACATGACCTCCCGAACGTTCAGGTGGGTTTAATTTAATTAACTGGAATTAATTGGGTGACATTTGTGGTGTCTGCTTGTCATGCTCGCTGGAGCTTACATGAGTCGCTAGTGCGGTTTCACACTATCCGTTCCTTCAATTGCCATTGGTCCATTAGCCCGTTGTGAAGCACCCTTGTCATCACCGTTAGCCATTAGGGAGAAAACTCTCCCCGCTCCCTTCTCCATTCCTCGTCTAATTGAAGATTCCCCACCCCATTTGGGGTGGGTCCGGTAGAGTAAATGGACATAGATGAGGCTATTCAGCCGATAATTCCTTTCTTCAAGTCTTCAATTTTTGAATTCCCATTAATCAAAGCGCTAACTAGTTCACAAGATTGGGCCACATTTTGGGCTCACGGCCTAAATCCGAATCCTTTGTATGGATGGAAAGAAAAAACCTCAAATCATGGACTATGAAATTGGAAAACCAAGGTTTGACTGCCACTTCATACTCTCGTGTTGGTGAGATTTTGAAACCCAACTCTACAAAATTGTTTGTTGTCGGTTTGTTCCCTTAAATCTCTATAGTTTGCGTTTTCATATGTCTTTTTTTCTCCGATTCTGTGCAATCCAAGAAGATTAAGAATTGCTATATGTTTTTTATAGAACTCGGATTATCTATTCACTATTTAGGCCAAAATTGCCAAGAAAGCCAAGACTCCCTTCTCTACCAGCTCTCCGAGCTACACCAAAATACAATGCAAAAGATGATCCCAATTCCCTCCCCAACAGAATACATATAGCCCTCCTCCCTCTAACTAACCGAATCTTTCCCTTGGGCCCACATTAAAACGTTAAAAATGTCACTCTCCCCTAACTAACTCAATCATTTATTTCATTTACATTTCCCTCACCTCCCCTCTTTCTTTTTCTCATATACCTCCTAATAACCGGGGGTATATCAGTTTTACTTTTTCCTTTTGTGATCCGTTATTAATATGAGTTCTCGTCTATTTTATTTTTTATTATTGTGTGGTTATTACATTTTGTGATTTTTGATTCTTGTTTCAAGGCTTTTGTATTTGTTCTTTCTTTTATACGGTAAGATTGCTATTGTTATCAATGTTGGAATTGGACTGAGATTTTTAATTCGTTTGGAGCTTGTTTGTGGTTTCTTAAATAGTTCTATATTATGTAAAACATTTTAGTAATGTTTTGAATCATAAACTTGAAGCAGATTGCTTCTTGTTGCGGGTTATGAGAGGTATTTTGAGCAATATTGGAGCTCTATTATACATTGAACTCGAATATTTGGAGGTTGGGGCTAAATCAGTGTTAAATTATTGATGAAAAGAGGGAAGTCGAGCTAAGGACTCGGTAATAGTTACTTAGGAAGCTCCGAAAAGGGTTTCAAAGCATTATTAGGTTAGGATTTTGCCTGCATCAGACCCATTTTAAAATATGTCTAGGTTCCTTGTAGAATGATGACTTTAAGTCTTGATATTGTAAACTATGAATTTGATGAACAAATGAATTATATGAAAAAAAGCAACAGTTTTCCAAGAAGCTATTCGAATTATGGAAAGGGAAAATCCCAAAGCCCTAGAGCTAATAGGATCTTGCATAATGACTCCAAATGACATTTATAAAAATAAAATTGTGATTACCAAATGGTTTTCATGGTGCACACCTAGTAGGAGCCATAATTTAGCTTCCTCGGAATTGCCTTATTGCTATTTAACTCTCTGCCATTAGATCTTTGCTTCTCTTTGAATGAAAAGGTACGTGGTAGCTACTCAATACAGCTACCCTAGCAGCCAAGCACCAAAGAATTTGAGAGCACTTTTCTCAACACTTGGATTTTATAAGAGTAGTGGGAAACCAAGCAACCCTTGAGTTTCCAACTACTCCAAAATGCACGCCAGTTGGGTCGGCTATTTTTCATGTCTGTATTAACTACTTCCTACGACCACTGATATTTGAACCTTTTGGGAATTTTGTACTCCAAGATGGCCTATAGGAGTCCTCATGATTCGCTTGAGATGGCTAATAAGGATATGCAAGAAAAGGCACCTCCTGGAATTTATCTGGTTAATGTAAAGGAACCACTAGGCAATGATATCCTTTCACTAAAAAATTCAGGCAATCATATGATTAATTTGGATATATATTTCTAAAAGAAATTTGGACACACTGATATATCCAGACGCAGGACACACAAACACTTCAACCCGAAATTTAAAAAAACACATTTAATTCGAGCCTTTTACAATGCTTACTGCTGAACCCATTAAATCAAACCCTGAAACCTCACCTGGCCCTAAAAAACCGTTGAAAGGCAGAAAGAAACCACACACTGCCATTTATTTCTCCCCCATGAGTGCGTATCACGATGTTAAATTTACATGTCAATAGATGCATATACATTTCAAAGTTCATATTTTCAACTTGTTCGTGTCCTACTTTTCTGTTGTAGTTTGTGTTTGTGGTCCTCTTCATCTTTGTGCACGTGTCTGTCTGTGTTCAAGTCCACATTAGGAAGCTTTTGGTTCAATATGGGTGTAGTTTGATGTAATTCTGTTATAGTGTGGTTCAATTGATTTGGGAACATATTAGTCCATTGCAGTTAGAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGTAATTACCAATCATCATTTAGTTTTGCTGTTTCTTTGATGTGCTACCATTGCTCTATTGTCCTGATTTCTCATTCTTTTTAATGGATTTTGTTCAGGAACAACCCCAAGTACTGTTTCCAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCATAAATATTACTCTGGTTGTCAGTTTTTACACTTGTGATTGGATCATTCTGCTTTTGGAAGTACATCCTAGTCTAGCAGTTCTAATCTGCCTCACATTTTGAGTGGTAAACTTGACGGATTTTTTGTTTGTTGTTCTGATGGCCATTCTTATTTCCTGTTTAAGTTGCATCATTGGCTTGTTATGTTGATGGTGACAGGATGTTGATTCTAAATAAATCGGTGGAAAAAGAAACTTCCCTTCATGTCTCTTTCAATTTA TTTGTGACTAAGTTCTCTCCTTCCCCTTCCATATTCTTTCTTGACTCAATCTCGTCTCTCTCACAACATCTAGGGCACGCCCTGCTTGAGATCTCTCCTTCCCCTTCCATCTTCTTCATTTTCCCCAATCTCTCTCTCTCTCAGCTTCATCGCTTCAAAAATCGGCTCAATCTGACGGCTCCTTGATTCTGTACATCTATTTTCATCGTCCATTGCAGTTAGAAGATGGCAACAAAATACATAGTAGCTTCTTTATTTGGTGCAACTGCAGTTGTATATATCTTTGACCATCTTATTGCTGACAAGAAAATATTTGAAGTTAGCCATTCGCCTATCCCTCTCCTTCTGCCTTGCTGCTCGCTCTCACCTCTCTCTTTCCTTTCGTCTCTTGTTAACGACTCACTCTATGGCAGCTCCGTTCGGCATTCAGCGTTTGACTCTAGCTCCATTTGGCGTCTGACTCTAGACATGACCTCCCGAACGTTCAGGAGTCCTCATGATTCGCTTGAGATGGCTAATAAGGATATGCAAGAAAAGGCACCTCCTGGAATTTATCTGAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCCAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCATAAATATTACTCTGGTTGTCAGTTTTTACACTTGTGATTGGATCATTCTGCTTTTGGAAGTACATCCTAGTCTAGCAGTTCTAATCTGCCTCACATTTTGAGTGGTAAACTTGACGGATTTTTTGTTTGTTGTTCTGATGGCCATTCTTATTTCCTGTTTAAGTTGCATCATTGGCTTGTTATGTTGATGGTGACAGGATGTTGATTCTAAATAAATCGGTGGAAAAAGAAACTTCCCTTCATGTCTCTTTCAATTTA ATGGCAACAAAATACATAGTAGCTTCTTTATTTGGTGCAACTGCAGTTGTATATATCTTTGACCATCTTATTGCTGACAAGAAAATATTTGAAGTTAGCCATTCGCCTATCCCTCTCCTTCTGCCTTGCTGCTCGCTCTCACCTCTCTCTTTCCTTTCGTCTCTTGTTAACGACTCACTCTATGGCAGCTCCGTTCGGCATTCAGCGTTTGACTCTAGCTCCATTTGGCGTCTGACTCTAGACATGACCTCCCGAACGTTCAGGAGTCCTCATGATTCGCTTGAGATGGCTAATAAGGATATGCAAGAAAAGGCACCTCCTGGAATTTATCTGAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCCAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCATAA MATKYIVASLFGATAVVYIFDHLIADKKIFEVSHSPIPLLLPCCSLSPLSFLSSLVNDSLYGSSVRHSAFDSSSIWRLTLDMTSRTFRSPHDSLEMANKDMQEKAPPGIYLKMAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPEA
BLAST of ClCG03G009980 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.0e-34 Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 1
BLAST of ClCG03G009980 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 5.2e-02 Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 1
HSP 2 Score: 139.0 bits (349), Expect = 5.9e-30 Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of ClCG03G009980 vs. TrEMBL
Match: A0A061EWV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1) HSP 1 Score: 42.4 bits (98), Expect = 7.5e-01 Identity = 18/30 (60.00%), Postives = 24/30 (80.00%), Query Frame = 1
HSP 2 Score: 137.9 bits (346), Expect = 1.3e-29 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 1
BLAST of ClCG03G009980 vs. TrEMBL
Match: A0A0B0MGC6_GOSAR (Monopolar spindle 2 OS=Gossypium arboreum GN=F383_19537 PE=4 SV=1) HSP 1 Score: 38.1 bits (87), Expect = 1.4e+01 Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 1
HSP 2 Score: 137.5 bits (345), Expect = 1.7e-29 Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of ClCG03G009980 vs. TrEMBL
Match: A0A0D2NRU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1) HSP 1 Score: 39.3 bits (90), Expect = 6.3e+00 Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 1
HSP 2 Score: 137.1 bits (344), Expect = 2.2e-29 Identity = 60/80 (75.00%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of ClCG03G009980 vs. TAIR10
Match: AT1G01170.1 (AT1G01170.1 Protein of unknown function (DUF1138)) HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 1
HSP 2 Score: 35.0 bits (79), Expect = 6.0e-02 Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = 1
BLAST of ClCG03G009980 vs. TAIR10
Match: AT4G00860.1 (AT4G00860.1 Protein of unknown function (DUF1138)) HSP 1 Score: 115.5 bits (288), Expect = 3.5e-26 Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 1
HSP 2 Score: 29.6 bits (65), Expect = 2.5e+00 Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 1
BLAST of ClCG03G009980 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo]) HSP 1 Score: 156.0 bits (393), Expect = 6.7e-35 Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1
BLAST of ClCG03G009980 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo]) HSP 1 Score: 49.7 bits (117), Expect = 6.7e-03 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 1
HSP 2 Score: 153.3 bits (386), Expect = 4.3e-34 Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 1
BLAST of ClCG03G009980 vs. NCBI nr
Match: gi|449463344|ref|XP_004149394.1| (PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus]) HSP 1 Score: 46.2 bits (108), Expect = 7.4e-02 Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 1
HSP 2 Score: 139.0 bits (349), Expect = 8.4e-30 Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of ClCG03G009980 vs. NCBI nr
Match: gi|590636108|ref|XP_007028779.1| (Uncharacterized protein TCM_024708 [Theobroma cacao]) HSP 1 Score: 42.4 bits (98), Expect = 1.1e+00 Identity = 18/30 (60.00%), Postives = 24/30 (80.00%), Query Frame = 1
HSP 2 Score: 137.9 bits (346), Expect = 1.9e-29 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 1
BLAST of ClCG03G009980 vs. NCBI nr
Match: gi|728810096|gb|KHF99441.1| (Monopolar spindle 2 [Gossypium arboreum]) HSP 1 Score: 38.1 bits (87), Expect = 2.0e+01 Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 1
HSP 2 Score: 137.5 bits (345), Expect = 2.5e-29 Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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