ClCG03G009460 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGGTTAGATTTGTATTTCTTCTTCCGCTTGTATTTTTGTATTCATAATAATTGATCGCTTAGATATAATAAGCGATCGTTCAATAATTATAAGCGATCGCTTAGTATACTATGCTACCGCTTAATAGTTATATGCGATTGCCCACGAGTTACAAACAATCGCTTAGAAATCATACGCTTATGACTGCTAAGCAATCGCTTGGAAACTGCTAAACGATTGCTTAGATATGCTAAACAATCGCTTAGCAGTTGTATGCGATCGTTTAGTTTTTTTTATGCGATCGCTTAGCAATTATCTAACCTATTGATATATTTGTCTGATTCAGGGTAATGAAGATGAAGAAGACAATCAAAAAAGTTACCTCGACGATAATGGAAACGACAACGGGGAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCGTCTGATCTAACTTAAACCAAAGGAAACGATGACAGTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGCTCCCCACTCAATCATTAACATGAGAAGCATTGTTGACTTGAACACGCCAGCCGAAGTGGCTGGGGTATTTCTTTAATTTGATGTACATATCATTTGCATGTATATGTATACTAACTGAGTTTCCATTTTGTATAAGAAAAGAAGGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGGTTTTCACCTGAGGATGTGAAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC CACCCGACGTCCATAAGGCACAAGCACTCACAGACGTATAAGGTTCTGAAGGAGGAGATATCTGCTACTCGCAATGACCTGGCGAACTTCACGACAATGGTTCTTGAGCAGCACGACCATTTAAGCAAGCAGATAGACAACTTGAGGATGTTCATCGAGCGTCTACATCAGAATGAGGGGGGTGGTGGAGATCGTCAGGCTGAAGAAGGGTGTGGCAGGGGTCATGAAGGGTCTGGGGAGGCAATGGCGATAATGGTTTACAACCAACCCACTGAGGAAGAAACCAATATCGCCAGTGATCAAGAAGTCCCCCCAATCGATCCCCCCACGACACAACCACCACCATCTGTCGAAGAGATCCACAGTGAAGTGATACCTGATTGTCGAAAGAGGAATAAGCCGACGAGAGACCGAAGAGGGAGCCAACGCACTCTTAGCCTAACCCAACATCCTCCAATACCGAGCCAACCCCATCCCAACCAACTTCTTCTTTTAAACCCAAGCCAATCCCACCCTAACCCCAACCTCAACCACCACCTCAACCCTAACCTCAACCCCAACCTAAACCACCACCTCAACCCCAACTTCCCCAACCTCAACCCCAACCCATGCCCCAACCTCAACCTCAACCTCAACCCTAACCTTCCCAACCAACTCTACCTAAACCCAAACCTTCCCAACCAACTC HPTSIRHKHSQTYKVLKEEISATRNDLANFTTMVLEQHDHLSKQIDNLRMFIERLHQNEGGGGDRQAEEGCGRGHEGSGEAMAIMVYNQPTEEETNIASDQEVPPIDPPTTQPPPSVEEIHSEVIPDCRKRNKPTRDRRGSQRTLSLTQHPPIPSQPHPNQLLLLNPSQSHPNPNLNHHLNPNLNPNLNHHLNPNFPNLNPNPCPNLNLNLNPNLPNQLYLNPNLPNQL
BLAST of ClCG03G009460 vs. Swiss-Prot
Match: CSP_PLARE (Circumsporozoite protein OS=Plasmodium reichenowi PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09 Identity = 36/78 (46.15%), Postives = 44/78 (56.41%), Query Frame = 1
HSP 2 Score: 62.4 bits (150), Expect = 7.5e-09 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 1
HSP 3 Score: 62.0 bits (149), Expect = 9.8e-09 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 1
HSP 4 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 1
HSP 5 Score: 60.8 bits (146), Expect = 2.2e-08 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
BLAST of ClCG03G009460 vs. Swiss-Prot
Match: CSP_PLAFL (Circumsporozoite protein (Fragment) OS=Plasmodium falciparum (isolate le5) PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 1
HSP 2 Score: 58.5 bits (140), Expect = 1.1e-07 Identity = 35/78 (44.87%), Postives = 42/78 (53.85%), Query Frame = 1
HSP 3 Score: 55.8 bits (133), Expect = 7.0e-07 Identity = 37/97 (38.14%), Postives = 46/97 (47.42%), Query Frame = 1
BLAST of ClCG03G009460 vs. Swiss-Prot
Match: CSP_PLAFA (Circumsporozoite protein OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 51/175 (29.14%), Postives = 72/175 (41.14%), Query Frame = 1
BLAST of ClCG03G009460 vs. Swiss-Prot
Match: CSP_PLAFO (Circumsporozoite protein OS=Plasmodium falciparum (isolate NF54) PE=3 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 1
HSP 2 Score: 59.7 bits (143), Expect = 4.8e-08 Identity = 45/142 (31.69%), Postives = 63/142 (44.37%), Query Frame = 1
BLAST of ClCG03G009460 vs. Swiss-Prot
Match: CSP_PLAFT (Circumsporozoite protein OS=Plasmodium falciparum (isolate t4 / Thailand) PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08 Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 1
HSP 2 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 37/97 (38.14%), Postives = 46/97 (47.42%), Query Frame = 1
BLAST of ClCG03G009460 vs. TrEMBL
Match: A0A0V0QHL1_PSEPJ (Uncharacterized protein OS=Pseudocohnilembus persalinus GN=PPERSA_03744 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of ClCG03G009460 vs. TrEMBL
Match: A0A0V0QHL1_PSEPJ (Uncharacterized protein OS=Pseudocohnilembus persalinus GN=PPERSA_03744 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1
HSP 2 Score: 53.9 bits (128), Expect = 3.0e-04 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 1
HSP 3 Score: 47.8 bits (112), Expect = 2.1e-02 Identity = 31/66 (46.97%), Postives = 36/66 (54.55%), Query Frame = 1
HSP 4 Score: 37.4 bits (85), Expect = 2.9e+01 Identity = 24/60 (40.00%), Postives = 33/60 (55.00%), Query Frame = 1
HSP 5 Score: 71.6 bits (174), Expect = 1.4e-09 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of ClCG03G009460 vs. TrEMBL
Match: C5LJS1_PERM5 (Putative uncharacterized protein OS=Perkinsus marinus (strain ATCC 50983 / TXsc) GN=Pmar_PMAR022416 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 1
HSP 2 Score: 43.5 bits (101), Expect = 4.0e-01 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 1
HSP 3 Score: 70.9 bits (172), Expect = 2.3e-09 Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 1
BLAST of ClCG03G009460 vs. TrEMBL
Match: T1EPZ8_HELRO (Uncharacterized protein OS=Helobdella robusta GN=HELRODRAFT_160219 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 1
HSP 2 Score: 68.9 bits (167), Expect = 8.9e-09 Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 1
BLAST of ClCG03G009460 vs. TrEMBL
Match: A0A060Z491_ONCMY (Uncharacterized protein OS=Oncorhynchus mykiss GN=GSONMT00032087001 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.7e-07 Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1
HSP 2 Score: 58.9 bits (141), Expect = 9.2e-06 Identity = 62/188 (32.98%), Postives = 82/188 (43.62%), Query Frame = 1
HSP 3 Score: 57.8 bits (138), Expect = 2.1e-05 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1
HSP 4 Score: 43.9 bits (102), Expect = 3.1e-01 Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 1
HSP 5 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 1
BLAST of ClCG03G009460 vs. NCBI nr
Match: gi|564303633|ref|XP_006224955.1| (PREDICTED: LOW QUALITY PROTEIN: retrotransposon-derived protein PEG10 isoform X1 [Rattus norvegicus]) HSP 1 Score: 73.2 bits (178), Expect = 6.8e-10 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 1
BLAST of ClCG03G009460 vs. NCBI nr
Match: gi|564303633|ref|XP_006224955.1| (PREDICTED: LOW QUALITY PROTEIN: retrotransposon-derived protein PEG10 isoform X1 [Rattus norvegicus]) HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1
HSP 2 Score: 62.8 bits (151), Expect = 9.1e-07 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 1
HSP 3 Score: 35.8 bits (81), Expect = 1.2e+02 Identity = 34/124 (27.42%), Postives = 53/124 (42.74%), Query Frame = 1
HSP 4 Score: 72.0 bits (175), Expect = 1.5e-09 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of ClCG03G009460 vs. NCBI nr
Match: gi|954188846|gb|KRX01660.1| (hypothetical protein PPERSA_03744 [Pseudocohnilembus persalinus]) HSP 1 Score: 56.2 bits (134), Expect = 8.6e-05 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1
HSP 2 Score: 53.9 bits (128), Expect = 4.2e-04 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 1
HSP 3 Score: 47.8 bits (112), Expect = 3.0e-02 Identity = 31/66 (46.97%), Postives = 36/66 (54.55%), Query Frame = 1
HSP 4 Score: 37.4 bits (85), Expect = 4.1e+01 Identity = 24/60 (40.00%), Postives = 33/60 (55.00%), Query Frame = 1
HSP 5 Score: 71.6 bits (174), Expect = 2.0e-09 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of ClCG03G009460 vs. NCBI nr
Match: gi|294885165|ref|XP_002771210.1| (hypothetical protein Pmar_PMAR022416 [Perkinsus marinus ATCC 50983]) HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 1
HSP 2 Score: 43.5 bits (101), Expect = 5.7e-01 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 1
HSP 3 Score: 70.9 bits (172), Expect = 3.4e-09 Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 1
BLAST of ClCG03G009460 vs. NCBI nr
Match: gi|675859788|ref|XP_009015454.1| (hypothetical protein HELRODRAFT_160219 [Helobdella robusta]) HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 1
HSP 2 Score: 68.9 bits (167), Expect = 1.3e-08 Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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