ClCG03G003540 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGGGGAGTGGGGACTGCAGGCGAAAGTTAGAACTTTGCCTTCGTACTTTCCTTTTGGATTGGCCTTTCCAGTAAAAGGGCGAAATGGAAGCTGTGGCCGTCTTCGGAAGGGGAGCTCCGCCGCTTCTCCGGCCGCCGACCAGAACCTTTTGCAGCTTACCGCACTCCCGGACGGCCGCTCTGCGCCACCGCGACCATCTTTCAGCATTCCCTTCGAATTCCCATCTCTTCTCCAAATTTTCTACTCGTTCTCGTGCTGCTCCCATTGACAATGAATCCTTCATCTTCTTACCCCATTTGGTTGCCTCCCTGGTTTGCTCACTTTCCTTTCTCCTTTTCGTTCGATTCCACTGGCTTTTAATTGACCTGTTTTGAGATTAATCGATTTTTTCTTTTGAGGTGTAGGAGCGAGTCGACCAGACTTACATTATGGTGAAACCTGACGGTGTTCAACGTGGCCTTGTGAGTTTTTCCTTTACTACCTGATAATTTTGCCCTTAATTTCTGCGTCTTCTCTCTTTTTGTCTCTGGTTGTTGTTCAGCTCCTGTGCTGGTTTCAATTCTTGAATGTGAGTTCAATTGTGTTAAATAATGTCAAACTGAGGAGGAAAAAACAGAAATAGAAATGAATGTATCCACAATTTCCTCTGTAATTATAGCGGAGAATTGTTTGATGTTCATTATGAAGCTTTCTTGCTTTAACTGAGTTTGTCTTAGGTTGGAGAGATAATTTCGCGATTTGAGAAGAAAGGGTTTAAGCTTACTGGCTTGAAGCTCTTCCAATGCTCCAAGGATTTGGCTGAGGTTTGTCATTCTCCATGATGTTTCTCAGAAGTTCCTTGGAGAATTTGATTTTTGTTCTAATTTAGGCTTACTTGAATAAGTTCAAAAGATTTAAGGCCTGGTTGGTTTTTGGTTCTTGGTTTTAAAAAACTAAACCTATTTCCTCTTAATTTCTTACAAGATTTGCATCTTAAGAAGTTGAATTCTTAGCCAAATTTCAAAAACAAAAACAAGTTTTTCAAAACTACGTTTCTTAGTTTTCAAAACTTTTTCAAAATAAGGTAAAACGTAGATATCATAACAAAGCAAAAAGTTTAGTGCAATATGTGTTTATATGCTTAATTTTCAAAAACTAAAAACCAAATGGTTACCAAACGGACTTAAAGTATTAGAGTTTTACTTCATTTCCATATAAACAATTTGGAAGAATATTACATAAGCTAATCGGCCGTTTGAGACTTCCATTAAACATTCTCCTTTTGTTATCTTTCCCAACCGTGGTTTCTATTTTTTGTTCTCTCTATCAAATAATCTTATATTATTACAGGAACACTATAAAGATCTTAAGGGCAAGTCCTTTTTTCCTGGTTTAATCGAGTACATAACATCAGGTCCTGTTGTGTGTATGGTATGTTTCTCATAACTCTATTTCTGCTGTATTTTGGCCTATTATAAAAAACAAACAACTATCCTTGTAACTTTCCCATCAATGTTCATTGCGTTTATTTAGGCGTGGGAGGGTGTCGGTGTTGTGGCATCAGCACGTAAGTTAATCGGAGTTACAAATCCTCTCGAAGCTGAGCCAGGAACAATAAGAGGGGATCTTGCTATTCAAAAAGGAAGGTCAGCCACATAAATTTTGATTCTTGGCGTATTTTATGAATGCTACTGAATGTACATTAGAATGAGCTTGTTTGAAAATCTTGGCAGGAATGTGATTCATGGGAGTGATAGTCCTGAGAGTGGGAAGCGTGAAGTAGGTAAGAAACACTGGTTTTAAAAAGGCTTAACTTGTGTTACATTCTCGACAATATTACTATAATCTGTGGATTTGTTATTGTTACGGTAAACTTTTCATAGATCAGAGATAAGAAACTTCACAAAATAAATTATTTGTCTAGTCGGTAGTCTTTTACCGAACATGCTGGACCTTGGATCTAGGAGGCAGTAGCACACTTCAAAACCATAAGGGTTGTTTCTGCTAATATCATCAACTTTTTTTTAGAAGCACAAGAAATAGGATAGAGAGGAGGGGGATCGAACCTCCCTCCTCTAGGATGGAAAATCATGCCAATTACTGCTGAATTAAGCTTGCTTTGGCTAAATTCCACTTGAAGTGGTAACAATTTTGCATGTTTTTGTAAACTCTGATCATCCTGACTAGTTTTAAGGCTTGTTTGCTTAAAAAAGTGCTTTTAAGTAATATATATTACACACTTAGATAGTCAATCTAAAGTTCCAAACAGGCACTATAGCTGAGGTATGCTGCAGTAATTAAGTTTAGAGGTTTGTATTAAGCAAGAATTCTTGATAATTCCTTGAAATGGACTAAGGATTCTCAAGTACGATTTTGAATTATTTTCACCTTGCTCTAAGTCCTAAATCTTCTGCCTGTGCAGCTCTCTGGTTCAAAGAAGGTGAATTGGTAGAGTGGGAGCCAGCTCTTGTACCATGGCTCATAGAGTGATGTTGTCTATGAAGCATACAAATTATGATCATTCTTGTCTGTAATCTTGAATTATAGAATAAGATGTCGGCAGAGCCCTGTAATCTTCCTCACAGAATTGTTTATGCAAAAAGGATGAAATCCATTTTGAATGTCAAAAGACTCCACAGAAATTTTCATCTTGAATTACGAAAATGAGTCACTCATA AAAAAGGGGAGTGGGGACTGCAGGCGAAAGTTAGAACTTTGCCTTCGTACTTTCCTTTTGGATTGGCCTTTCCAGTAAAAGGGCGAAATGGAAGCTGTGGCCGTCTTCGGAAGGGGAGCTCCGCCGCTTCTCCGGCCGCCGACCAGAACCTTTTGCAGCTTACCGCACTCCCGGACGGCCGCTCTGCGCCACCGCGACCATCTTTCAGCATTCCCTTCGAATTCCCATCTCTTCTCCAAATTTTCTACTCGTTCTCGTGCTGCTCCCATTGACAATGAATCCTTCATCTTCTTACCCCATTTGGTTGCCTCCCTGGAGCGAGTCGACCAGACTTACATTATGGTGAAACCTGACGGTGTTCAACGTGGCCTTGTTGGAGAGATAATTTCGCGATTTGAGAAGAAAGGGTTTAAGCTTACTGGCTTGAAGCTCTTCCAATGCTCCAAGGATTTGGCTGAGGAACACTATAAAGATCTTAAGGGCAAGTCCTTTTTTCCTGGTTTAATCGAGTACATAACATCAGGTCCTGTTGTGTGTATGGCGTGGGAGGGTGTCGGTGTTGTGGCATCAGCACGTAAGTTAATCGGAGTTACAAATCCTCTCGAAGCTGAGCCAGGAACAATAAGAGGGGATCTTGCTATTCAAAAAGGAAGGAATGTGATTCATGGGAGTGATAGTCCTGAGAGTGGGAAGCGTGAAGTAGCTCTCTGGTTCAAAGAAGGTGAATTGGTAGAGTGGGAGCCAGCTCTTGTACCATGGCTCATAGAGTGATGTTGTCTATGAAGCATACAAATTATGATCATTCTTGTCTGTAATCTTGAATTATAGAATAAGATGTCGGCAGAGCCCTGTAATCTTCCTCACAGAATTGTTTATGCAAAAAGGATGAAATCCATTTTGAATGTCAAAAGACTCCACAGAAATTTTCATCTTGAATTACGAAAATGAGTCACTCATA ATGGAAGCTGTGGCCGTCTTCGGAAGGGGAGCTCCGCCGCTTCTCCGGCCGCCGACCAGAACCTTTTGCAGCTTACCGCACTCCCGGACGGCCGCTCTGCGCCACCGCGACCATCTTTCAGCATTCCCTTCGAATTCCCATCTCTTCTCCAAATTTTCTACTCGTTCTCGTGCTGCTCCCATTGACAATGAATCCTTCATCTTCTTACCCCATTTGGTTGCCTCCCTGGAGCGAGTCGACCAGACTTACATTATGGTGAAACCTGACGGTGTTCAACGTGGCCTTGTTGGAGAGATAATTTCGCGATTTGAGAAGAAAGGGTTTAAGCTTACTGGCTTGAAGCTCTTCCAATGCTCCAAGGATTTGGCTGAGGAACACTATAAAGATCTTAAGGGCAAGTCCTTTTTTCCTGGTTTAATCGAGTACATAACATCAGGTCCTGTTGTGTGTATGGCGTGGGAGGGTGTCGGTGTTGTGGCATCAGCACGTAAGTTAATCGGAGTTACAAATCCTCTCGAAGCTGAGCCAGGAACAATAAGAGGGGATCTTGCTATTCAAAAAGGAAGGAATGTGATTCATGGGAGTGATAGTCCTGAGAGTGGGAAGCGTGAAGTAGCTCTCTGGTTCAAAGAAGGTGAATTGGTAGAGTGGGAGCCAGCTCTTGTACCATGGCTCATAGAGTGA MEAVAVFGRGAPPLLRPPTRTFCSLPHSRTAALRHRDHLSAFPSNSHLFSKFSTRSRAAPIDNESFIFLPHLVASLERVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKDLAEEHYKDLKGKSFFPGLIEYITSGPVVCMAWEGVGVVASARKLIGVTNPLEAEPGTIRGDLAIQKGRNVIHGSDSPESGKREVALWFKEGELVEWEPALVPWLIE
BLAST of ClCG03G003540 vs. Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 301.2 bits (770), Expect = 9.5e-81 Identity = 152/214 (71.03%), Postives = 168/214 (78.50%), Query Frame = 1
BLAST of ClCG03G003540 vs. Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.6e-80 Identity = 143/195 (73.33%), Postives = 162/195 (83.08%), Query Frame = 1
BLAST of ClCG03G003540 vs. Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 4.7e-80 Identity = 158/232 (68.10%), Postives = 173/232 (74.57%), Query Frame = 1
BLAST of ClCG03G003540 vs. Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 8.9e-79 Identity = 150/228 (65.79%), Postives = 174/228 (76.32%), Query Frame = 1
BLAST of ClCG03G003540 vs. Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 6.8e-55 Identity = 99/149 (66.44%), Postives = 117/149 (78.52%), Query Frame = 1
BLAST of ClCG03G003540 vs. TrEMBL
Match: A0A0A0LWK3_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_1G050200 PE=3 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 2.6e-117 Identity = 213/227 (93.83%), Postives = 216/227 (95.15%), Query Frame = 1
BLAST of ClCG03G003540 vs. TrEMBL
Match: E5GBW3_CUCME (Nucleoside diphosphate kinase OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-116 Identity = 213/227 (93.83%), Postives = 216/227 (95.15%), Query Frame = 1
BLAST of ClCG03G003540 vs. TrEMBL
Match: M5WN95_PRUPE (Nucleoside diphosphate kinase OS=Prunus persica GN=PRUPE_ppa010872mg PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85 Identity = 168/233 (72.10%), Postives = 186/233 (79.83%), Query Frame = 1
BLAST of ClCG03G003540 vs. TrEMBL
Match: W9SFA4_9ROSA (Nucleoside diphosphate kinase OS=Morus notabilis GN=L484_006917 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.6e-85 Identity = 169/235 (71.91%), Postives = 184/235 (78.30%), Query Frame = 1
BLAST of ClCG03G003540 vs. TrEMBL
Match: A0A0A6ZDY5_ARAHY (Nucleoside diphosphate kinase OS=Arachis hypogaea PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 5.8e-85 Identity = 167/238 (70.17%), Postives = 187/238 (78.57%), Query Frame = 1
BLAST of ClCG03G003540 vs. TAIR10
Match: AT5G63310.1 (AT5G63310.1 nucleoside diphosphate kinase 2) HSP 1 Score: 301.2 bits (770), Expect = 5.3e-82 Identity = 152/214 (71.03%), Postives = 168/214 (78.50%), Query Frame = 1
BLAST of ClCG03G003540 vs. TAIR10
Match: AT4G09320.1 (AT4G09320.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 203.0 bits (515), Expect = 2.0e-52 Identity = 94/159 (59.12%), Postives = 118/159 (74.21%), Query Frame = 1
BLAST of ClCG03G003540 vs. TAIR10
Match: AT4G11010.1 (AT4G11010.1 nucleoside diphosphate kinase 3) HSP 1 Score: 190.3 bits (482), Expect = 1.3e-48 Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 1
BLAST of ClCG03G003540 vs. TAIR10
Match: AT4G23900.1 (AT4G23900.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47 Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 1
BLAST of ClCG03G003540 vs. TAIR10
Match: AT1G17410.1 (AT1G17410.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 88.6 bits (218), Expect = 5.4e-18 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 1
BLAST of ClCG03G003540 vs. NCBI nr
Match: gi|449469614|ref|XP_004152514.1| (PREDICTED: nucleoside diphosphate kinase [Cucumis sativus]) HSP 1 Score: 429.5 bits (1103), Expect = 3.7e-117 Identity = 213/227 (93.83%), Postives = 216/227 (95.15%), Query Frame = 1
BLAST of ClCG03G003540 vs. NCBI nr
Match: gi|659067425|ref|XP_008439388.1| (PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Cucumis melo]) HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-116 Identity = 213/227 (93.83%), Postives = 216/227 (95.15%), Query Frame = 1
BLAST of ClCG03G003540 vs. NCBI nr
Match: gi|1009130564|ref|XP_015882369.1| (PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 332.4 bits (851), Expect = 6.1e-88 Identity = 168/234 (71.79%), Postives = 190/234 (81.20%), Query Frame = 1
BLAST of ClCG03G003540 vs. NCBI nr
Match: gi|694358154|ref|XP_009359482.1| (PREDICTED: nucleoside diphosphate kinase 2, chloroplastic-like [Pyrus x bretschneideri]) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 173/232 (74.57%), Postives = 188/232 (81.03%), Query Frame = 1
BLAST of ClCG03G003540 vs. NCBI nr
Match: gi|658000787|ref|XP_008392850.1| (PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Malus domestica]) HSP 1 Score: 328.6 bits (841), Expect = 8.9e-87 Identity = 172/232 (74.14%), Postives = 187/232 (80.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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