ClCG03G003220 (gene) Watermelon (Charleston Gray)

NameClCG03G003220
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 3709398 .. 3709919 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGTCAAGGCAGACCAAAATGCAAGCATCAACGACTTTGTTAATCTTACTTGCAACCGAACTATTGAACTCAAAAACTTGTGCCTTTCCCACATAAATTCAGACCCTCGCGATGATTTGAAGACAAGTTTGACTGGCTTCCTGACGATATTTGTGAATCATAGCATCACAGATATCAACAACGACATTTTATTCCTTAAAAAAGAGCTCGATTCAAACAAGATTGGTCATGACACAAAAGATATGTATATCGGTTGTTCGGACAACTATGTAATGGGATTGGGTGATCTACAAGAAACTTTGCAGAAGCTACAGAAAAAAGGGAGTGTAGATGTATTTTACTCGCTAATCACTCAAACTTATGATCTTTTAACTGGGTGTATGGAAGATTTCGAAGGGATTTCTATCATCCCTCCTGAGTGGCAGTCTCGTTACAAAGCTTCTTATGCATTATTGGATCTTTCATTGTCAATGATAAATTTGATTAAATGTAATAGCCCTCAAGCATGTAACAAATAA

mRNA sequence

ATGTTAGTCAAGGCAGACCAAAATGCAAGCATCAACGACTTTGTTAATCTTACTTGCAACCGAACTATTGAACTCAAAAACTTGTGCCTTTCCCACATAAATTCAGACCCTCGCGATGATTTGAAGACAAGTTTGACTGGCTTCCTGACGATATTTGTGAATCATAGCATCACAGATATCAACAACGACATTTTATTCCTTAAAAAAGAGCTCGATTCAAACAAGATTGGTCATGACACAAAAGATATGTATATCGGTTGTTCGGACAACTATGTAATGGGATTGGGTGATCTACAAGAAACTTTGCAGAAGCTACAGAAAAAAGGGAGTGTAGATGTATTTTACTCGCTAATCACTCAAACTTATGATCTTTTAACTGGGTGTATGGAAGATTTCGAAGGGATTTCTATCATCCCTCCTGAGTGGCAGTCTCGTTACAAAGCTTCTTATGCATTATTGGATCTTTCATTGTCAATGATAAATTTGATTAAATGTAATAGCCCTCAAGCATGTAACAAATAA

Coding sequence (CDS)

ATGTTAGTCAAGGCAGACCAAAATGCAAGCATCAACGACTTTGTTAATCTTACTTGCAACCGAACTATTGAACTCAAAAACTTGTGCCTTTCCCACATAAATTCAGACCCTCGCGATGATTTGAAGACAAGTTTGACTGGCTTCCTGACGATATTTGTGAATCATAGCATCACAGATATCAACAACGACATTTTATTCCTTAAAAAAGAGCTCGATTCAAACAAGATTGGTCATGACACAAAAGATATGTATATCGGTTGTTCGGACAACTATGTAATGGGATTGGGTGATCTACAAGAAACTTTGCAGAAGCTACAGAAAAAAGGGAGTGTAGATGTATTTTACTCGCTAATCACTCAAACTTATGATCTTTTAACTGGGTGTATGGAAGATTTCGAAGGGATTTCTATCATCCCTCCTGAGTGGCAGTCTCGTTACAAAGCTTCTTATGCATTATTGGATCTTTCATTGTCAATGATAAATTTGATTAAATGTAATAGCCCTCAAGCATGTAACAAATAA

Protein sequence

MLVKADQNASINDFVNLTCNRTIELKNLCLSHINSDPRDDLKTSLTGFLTIFVNHSITDINNDILFLKKELDSNKIGHDTKDMYIGCSDNYVMGLGDLQETLQKLQKKGSVDVFYSLITQTYDLLTGCMEDFEGISIIPPEWQSRYKASYALLDLSLSMINLIKCNSPQACNK
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G003220.1ClCG03G003220.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainGENE3DG3DSA:1.20.140.40coord: 12..163
score: 1.1
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 10..159
score: 2.
IPR006501Pectinesterase inhibitor domainTIGRFAMsTIGR01614TIGR01614coord: 12..162
score: 4.7
IPR006501Pectinesterase inhibitor domainunknownSSF101148Plant invertase/pectin methylesterase inhibitorcoord: 12..163
score: 3.14

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G003220Lsi02G004470Bottle gourd (USVL1VR-Ls)lsiwcgB184
The following gene(s) are paralogous to this gene:

None