ClCG03G003160 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTCGGGAGGGAATTTTCCGCCGGTGGTGAGTACCATCTTCATGGGATTCAAGCACTGCTTGAAGAGTATCAGATTCTGGTTGGTGGGTTCTTTTTTAGCGGATTTGTTCCCTTCTTTGTCATTTCTCAGTACGCTAACAGGGACGAAATCGAGGCTTGTGAGGACGTTTAAAGCGTTCGATAAGTTGTTTGATCAAGTAATAGCTGAACATCTTAGTCCTCAGCGAGAGAAACTTGGAGAATCTAAGGATCTTGTTGATGTTTTGCTTGATATACAGAGGAATGGATCTGATGATAAATTTCCTCTTACTATGGATAATGTTAAAGGCATTATTTTGGTATAA ATGGCGCTCGGGAGGGAATTTTCCGCCGGTGGTGAGTACCATCTTCATGGGATTCAAGCACTGCTTGAAGAGTATCAGATTCTGGTTGGTGGTACGCTAACAGGGACGAAATCGAGGCTTGTGAGGACGTTTAAAGCGTTCGATAAGTTGTTTGATCAAGTAATAGCTGAACATCTTAGTCCTCAGCGAGAGAAACTTGGAGAATCTAAGGATCTTGTTGATGTTTTGCTTGATATACAGAGGAATGGATCTGATGATAAATTTCCTCTTACTATGGATAATGTTAAAGGCATTATTTTGGTATAA ATGGCGCTCGGGAGGGAATTTTCCGCCGGTGGTGAGTACCATCTTCATGGGATTCAAGCACTGCTTGAAGAGTATCAGATTCTGGTTGGTGGTACGCTAACAGGGACGAAATCGAGGCTTGTGAGGACGTTTAAAGCGTTCGATAAGTTGTTTGATCAAGTAATAGCTGAACATCTTAGTCCTCAGCGAGAGAAACTTGGAGAATCTAAGGATCTTGTTGATGTTTTGCTTGATATACAGAGGAATGGATCTGATGATAAATTTCCTCTTACTATGGATAATGTTAAAGGCATTATTTTGGTATAA MALGREFSAGGEYHLHGIQALLEEYQILVGGTLTGTKSRLVRTFKAFDKLFDQVIAEHLSPQREKLGESKDLVDVLLDIQRNGSDDKFPLTMDNVKGIILV
BLAST of ClCG03G003160 vs. Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-06 Identity = 37/118 (31.36%), Postives = 60/118 (50.85%), Query Frame = 1
BLAST of ClCG03G003160 vs. Swiss-Prot
Match: C71E7_MANES (2-methylbutanal oxime monooxygenase OS=Manihot esculenta GN=CYP71E7 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-06 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1
BLAST of ClCG03G003160 vs. Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.8e-06 Identity = 34/116 (29.31%), Postives = 62/116 (53.45%), Query Frame = 1
BLAST of ClCG03G003160 vs. Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.6e-06 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 1
BLAST of ClCG03G003160 vs. Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 9.9e-06 Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 1
BLAST of ClCG03G003160 vs. TrEMBL
Match: A0A061FZ05_THECC (Cytochrome P450 71A1 OS=Theobroma cacao GN=TCM_014501 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.4e-24 Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 1
BLAST of ClCG03G003160 vs. TrEMBL
Match: B9RAS1_RICCO (Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1508230 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-23 Identity = 64/115 (55.65%), Postives = 80/115 (69.57%), Query Frame = 1
BLAST of ClCG03G003160 vs. TrEMBL
Match: A0A0J8BBD4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177170 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.7e-23 Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 1
BLAST of ClCG03G003160 vs. TrEMBL
Match: A0A068Q721_PRUMU (Cytochrome P450 71AP13 OS=Prunus mume GN=CYP71AP13 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-23 Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of ClCG03G003160 vs. TrEMBL
Match: W9S8S4_9ROSA (Cytochrome P450 71A1 OS=Morus notabilis GN=L484_018957 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.2e-23 Identity = 65/114 (57.02%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of ClCG03G003160 vs. TAIR10
Match: AT3G26230.1 (AT3G26230.1 cytochrome P450, family 71, subfamily B, polypeptide 24) HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 1
BLAST of ClCG03G003160 vs. NCBI nr
Match: gi|778657953|ref|XP_011651857.1| (PREDICTED: cytochrome P450 71A1-like [Cucumis sativus]) HSP 1 Score: 156.4 bits (394), Expect = 2.7e-35 Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = 1
BLAST of ClCG03G003160 vs. NCBI nr
Match: gi|659068773|ref|XP_008446152.1| (PREDICTED: uncharacterized protein LOC103488960 [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-35 Identity = 81/113 (71.68%), Postives = 87/113 (76.99%), Query Frame = 1
BLAST of ClCG03G003160 vs. NCBI nr
Match: gi|659068773|ref|XP_008446152.1| (PREDICTED: uncharacterized protein LOC103488960 [Cucumis melo]) HSP 1 Score: 152.1 bits (383), Expect = 5.1e-34 Identity = 80/114 (70.18%), Postives = 87/114 (76.32%), Query Frame = 1
HSP 2 Score: 155.2 bits (391), Expect = 6.0e-35 Identity = 82/114 (71.93%), Postives = 87/114 (76.32%), Query Frame = 1
BLAST of ClCG03G003160 vs. NCBI nr
Match: gi|449469586|ref|XP_004152500.1| (PREDICTED: cytochrome P450 71A1-like [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 1.0e-34 Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 1
BLAST of ClCG03G003160 vs. NCBI nr
Match: gi|778657961|ref|XP_011651873.1| (PREDICTED: cytochrome P450 71A1-like [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-34 Identity = 81/114 (71.05%), Postives = 89/114 (78.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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