ClCG02G023990 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGGCACCACTCAAGGCGGTGTCCTTGACGCACGTCCGGTACCAGAGGGGAGATCAGCTCGGGCATTTTCTGGCTTGGGTCTCTTTGATCCCCGTCTTCATTAGCCTCGGTGGATTTCTCTCTCACTTCATCTTCCGCCGCGAATTACAGGGTATGTTCTTCGCGCTAGGGCTTGTAATCTCTCAATTCATAAATGAGTTCATCAAGACCTCTGTTCAGCAAGCCCGTCCTGAGACGTGTGCGTTGTTGGAAATGTGTGATTCGCATGGTTGGCCCTCTAGTCACTCTCAGTATATGTTTTTCTTCGCTATCTACTTCACTCTTTTGTCGTATAAAGGGATTGGACTTTGGGGTACTGAAAGCAAGTGGATATTGAATCTCCTGGCTTGGTCTCTTGCTCTCTTGACGATGTACTCGAGGGTCTATTTGGGATACCATACTGTTGCACAGGTTTTTGCTGGAGCTACACTTGGTATGTTTCTTGGAGCTCTGTGGTTCTGGGTTGTCAATTCTGTGCTTTTCTGCTTCTTTCCGGCTATAGAGGAGAGCCAATTCGGCAGGAAGTTTTACATTAAGGACACTTCTCATATAAGTAATGTTTTGAAGTTCGAGTATGATAATGCAAGAGCTGCCAGAGAAAAGTTGGATTGTAAGTGCGACTGATCGAGTGGGATCTGATATGTGAGAAGGTACATATATCTTTCAATCTTTAAAGAAATAGAAACTAGAAGTTGTGCTGTAAGTTGATATTTTGATTAATTGGGCATGCTTTGCTTAATTCCTTGAATTCATTATGATGATTGTATCTCCTAGCTGCCTGAGTATTCACTGATTTTGATATGTCTGAAACTTTACTTTAATCAGAAGTTGAAATTTTATGCTAGCTATCCTTTTGGAGAAGATCTTAGATGATATCATAGAGGATTAAGAAGGAATTTGGATTCTATTGTGATTGATTAATTTTATGACAGTCTTTTGTGAAACTTTTGCTAGCCAGGAGATTGCTGAAGTGGATAATTACTTTTTCTGCACAACTGAAAGTCTGAAGCTTATCTTGCATAATGGTTTTTCTTGATTCTGATGGCTTTTCCTTTTACAGCCAGAAGTATCGAATTAATCAGCCGACGGCTATTGTTTTCACTTAGTCAATTTTATTTCCATAACCAAACAACATCAAAGTTCGCTTTTGAAATAACATTTTTTCAACTTCTTGGATGGCATTTTCCCATTTCCTTTACGGCTAGTATATAATTCAATCTTCATTCGTCCAATCTAGCTTTCTTGTGTCATTGATTTGGTTATACCATTTTTCTTGCTTTCAATGCACATACGATTATGAGAAGAAAATTTAGAGTTCTCACTTCTCAATCCATCCCTGATTTCTGGTTTTCTGGTTGGCTTGCTGTCTGTTAGTTCCTGTATCAAGGATTTGACAGTACATTTTGATTCACGTTCTTTTTATTGGTTCGATTAAAGAAGTCGATTTAAACTAGAAAGTTACTAGATAGAGAGATCGATTAAACAAATGATGATATGGCTTCTGATTATTATTGCAATCCACGGCAGCTATCTTCATGGAAAGCTTAATAATTGCATGCCCTTTACTTTTGTTGTTTGCCTGTTGTTAATAGTAGACTTTAAAATGTTCCAACTTGAACTTTTTACGAAGAAATTGATGTCTATTCACCTGTGAGTGTGACTGTCTTGCTACTTGATACCTATGTCTTGTCAATCTTCAATGAAATTTATTTGGGCAGTGTGGAAGAAAACTCAAATGAAATTAAAATTGAACAAGTGTGGCAGAAGAATTCTTGCATACAACAACTATAGAGCAAGGGGGCTTGAGTTGTATATTTCCGTTCCCATTTATCAATCTAGGGAGCTTATGCTTTGATTTTATCGATAATTTTGACTTCAAATATGTAGGATGAGTAAGCAATCTGCCAGCATAAGTTGAGCTATGCATAAGCTAATTCAACCACCTGTTAACGAAATGAGAAAGGGAGCTTATTCTTTGATTTTATTGATCTTTTCTTTTTCTTTTGATGTTGTTTCAGGAGAACCAAGAATGCTGTTGAAAATGGTCTTGCCCATATGTGAGACCTGGTTAGGAAATACTCAAAGAAACCAGCTGTGCAAAGGGATCAATTCACCATTGTAGATTACTGAAGAGAGGTTGCTTAGTGGCTGCCATGATATTTCTGGCCATAGACAGCGTTAATTAGGTAGAAACATTGATTTGATCATCAAATACTTTGATTTTATAAACTTAGTTTGAAACGTTTTTCACCTATATGGGTAGAGAGGAACTTTCTCTACTTCACTGGATCTAATTTTAATATCATATTGGACTGGATAGGATAATGTGGCGTGTGAAAGTTGAATTCACTTACTGGCTTG ATGGCGGCGGCACCACTCAAGGCGGTGTCCTTGACGCACGTCCGGTACCAGAGGGGAGATCAGCTCGGGCATTTTCTGGCTTGGGTCTCTTTGATCCCCGTCTTCATTAGCCTCGGTGGATTTCTCTCTCACTTCATCTTCCGCCGCGAATTACAGGGTATGTTCTTCGCGCTAGGGCTTGTAATCTCTCAATTCATAAATGAGTTCATCAAGACCTCTGTTCAGCAAGCCCGTCCTGAGACGTGTGCGTTGTTGGAAATGTGTGATTCGCATGGTTGGCCCTCTAGTCACTCTCAGTATATGTTTTTCTTCGCTATCTACTTCACTCTTTTGTCGTATAAAGGGATTGGACTTTGGGGTACTGAAAGCAAGTGGATATTGAATCTCCTGGCTTGGTCTCTTGCTCTCTTGACGATGTACTCGAGGGTCTATTTGGGATACCATACTGTTGCACAGGTTTTTGCTGGAGCTACACTTGGTATGTTTCTTGGAGCTCTGTGGTTCTGGGTTGTCAATTCTGTGCTTTTCTGCTTCTTTCCGGCTATAGAGGAGAGCCAATTCGGCAGGAAGTTTTACATTAAGGACACTTCTCATATAAGTAATGTTTTGAAGTTCGAGTATGATAATGCAAGAGCTGCCAGAGAAAAGTTGGATTGTAAGAGAACCAAGAATGCTGTTGAAAATGGTCTTGCCCATATGTGAGACCTGGTTAGGAAATACTCAAAGAAACCAGCTGTGCAAAGGGATCAATTCACCATTGTAGATTACTGAAGAGAGGTTGCTTAGTGGCTGCCATGATATTTCTGGCCATAGACAGCGTTAATTAGGTAGAAACATTGATTTGATCATCAAATACTTTGATTTTATAAACTTAGTTTGAAACGTTTTTCACCTATATGGGTAGAGAGGAACTTTCTCTACTTCACTGGATCTAATTTTAATATCATATTGGACTGGATAGGATAATGTGGCGTGTGAAAGTTGAATTCACTTACTGGCTTG ATGGCGGCGGCACCACTCAAGGCGGTGTCCTTGACGCACGTCCGGTACCAGAGGGGAGATCAGCTCGGGCATTTTCTGGCTTGGGTCTCTTTGATCCCCGTCTTCATTAGCCTCGGTGGATTTCTCTCTCACTTCATCTTCCGCCGCGAATTACAGGGTATGTTCTTCGCGCTAGGGCTTGTAATCTCTCAATTCATAAATGAGTTCATCAAGACCTCTGTTCAGCAAGCCCGTCCTGAGACGTGTGCGTTGTTGGAAATGTGTGATTCGCATGGTTGGCCCTCTAGTCACTCTCAGTATATGTTTTTCTTCGCTATCTACTTCACTCTTTTGTCGTATAAAGGGATTGGACTTTGGGGTACTGAAAGCAAGTGGATATTGAATCTCCTGGCTTGGTCTCTTGCTCTCTTGACGATGTACTCGAGGGTCTATTTGGGATACCATACTGTTGCACAGGTTTTTGCTGGAGCTACACTTGGTATGTTTCTTGGAGCTCTGTGGTTCTGGGTTGTCAATTCTGTGCTTTTCTGCTTCTTTCCGGCTATAGAGGAGAGCCAATTCGGCAGGAAGTTTTACATTAAGGACACTTCTCATATAAGTAATGTTTTGAAGTTCGAGTATGATAATGCAAGAGCTGCCAGAGAAAAGTTGGATTGTAAGAGAACCAAGAATGCTGTTGAAAATGGTCTTGCCCATATGTGA MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLIPVFISLGGFLSHFIFRRELQGMFFALGLVISQFINEFIKTSVQQARPETCALLEMCDSHGWPSSHSQYMFFFAIYFTLLSYKGIGLWGTESKWILNLLAWSLALLTMYSRVYLGYHTVAQVFAGATLGMFLGALWFWVVNSVLFCFFPAIEESQFGRKFYIKDTSHISNVLKFEYDNARAAREKLDCKRTKNAVENGLAHM
BLAST of ClCG02G023990 vs. Swiss-Prot
Match: LPPG_ARATH (Lipid phosphate phosphatase gamma, chloroplastic OS=Arabidopsis thaliana GN=LPPG PE=1 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.0e-97 Identity = 168/218 (77.06%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of ClCG02G023990 vs. Swiss-Prot
Match: DOPP1_MOUSE (Dolichyldiphosphatase 1 OS=Mus musculus GN=Dolpp1 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33 Identity = 91/217 (41.94%), Postives = 119/217 (54.84%), Query Frame = 1
BLAST of ClCG02G023990 vs. Swiss-Prot
Match: DOPP1_HUMAN (Dolichyldiphosphatase 1 OS=Homo sapiens GN=DOLPP1 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31 Identity = 87/219 (39.73%), Postives = 116/219 (52.97%), Query Frame = 1
BLAST of ClCG02G023990 vs. Swiss-Prot
Match: DOPP1_CALJA (Dolichyldiphosphatase 1 OS=Callithrix jacchus GN=DOLPP1 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31 Identity = 87/219 (39.73%), Postives = 115/219 (52.51%), Query Frame = 1
BLAST of ClCG02G023990 vs. Swiss-Prot
Match: DOPP1_DICDI (Dolichyldiphosphatase 1 OS=Dictyostelium discoideum GN=dolpp1 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31 Identity = 81/206 (39.32%), Postives = 122/206 (59.22%), Query Frame = 1
BLAST of ClCG02G023990 vs. TrEMBL
Match: A0A0A0L0F3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280490 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 2.8e-119 Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 1
BLAST of ClCG02G023990 vs. TrEMBL
Match: M5WCP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011124mg PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.4e-102 Identity = 181/220 (82.27%), Postives = 200/220 (90.91%), Query Frame = 1
BLAST of ClCG02G023990 vs. TrEMBL
Match: A0A061ET08_THECC (Phosphatidic acid phosphatase family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_022106 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.7e-100 Identity = 176/218 (80.73%), Postives = 196/218 (89.91%), Query Frame = 1
BLAST of ClCG02G023990 vs. TrEMBL
Match: V4SXZ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012685mg PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.2e-100 Identity = 174/214 (81.31%), Postives = 195/214 (91.12%), Query Frame = 1
BLAST of ClCG02G023990 vs. TrEMBL
Match: A0A0D2NDT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G248000 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 2.9e-100 Identity = 179/222 (80.63%), Postives = 195/222 (87.84%), Query Frame = 1
BLAST of ClCG02G023990 vs. TAIR10
Match: AT5G03080.1 (AT5G03080.1 Phosphatidic acid phosphatase (PAP2) family protein) HSP 1 Score: 356.7 bits (914), Expect = 1.1e-98 Identity = 168/218 (77.06%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of ClCG02G023990 vs. NCBI nr
Match: gi|659097780|ref|XP_008449810.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis melo]) HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-120 Identity = 212/220 (96.36%), Postives = 217/220 (98.64%), Query Frame = 1
BLAST of ClCG02G023990 vs. NCBI nr
Match: gi|449448826|ref|XP_004142166.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis sativus]) HSP 1 Score: 436.0 bits (1120), Expect = 4.0e-119 Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 1
BLAST of ClCG02G023990 vs. NCBI nr
Match: gi|1009172297|ref|XP_015867194.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 384.4 bits (986), Expect = 1.4e-103 Identity = 180/217 (82.95%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of ClCG02G023990 vs. NCBI nr
Match: gi|1009163190|ref|XP_015899833.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 384.4 bits (986), Expect = 1.4e-103 Identity = 180/217 (82.95%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of ClCG02G023990 vs. NCBI nr
Match: gi|645220231|ref|XP_008239288.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Prunus mume]) HSP 1 Score: 381.7 bits (979), Expect = 9.1e-103 Identity = 181/220 (82.27%), Postives = 201/220 (91.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|