ClCG02G020670 (gene) Watermelon (Charleston Gray)

NameClCG02G020670
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionDNA repair protein RAD51-like 4
LocationCG_Chr02 : 35170284 .. 35173959 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCATTGAAGTCTCTGGAGCAGGTTTGCGCACTCATAGACTCTAATTTCCAGACATTTTGTGCTTCACACGGCATTTTCACTGGTACTTTCTTCTTCTTCCCATTTGATTTTGATTCAATTTTCAATATAAAACTCCATCATTTTGATTTGCTGCCAGTGGAGGATTTCCTCATCCATGACCTATACGTTTTAGCTGCTTTTGCAGAGCAACAGCCTGCATCCGAGAAATTGAAGCAGGTGAAAACCTTCCTTACAGTTTCCATTTCTCTTGTTTATCATTCACTGTACTCAACTTCTTTATATCTTGTATGACTGTAACAGGGGATTACCCAAATCCTTTCAATTATTGATGCTGCTGAGCGACAACCATGGATGAACGGTCTGGAGCTTTTGGAAGATGCTGGAGAAAACAAGCATGTTCTGTCCACTGGTTTTGAAGGGTATTTTCACAAACTTTTTGAGGAAAAATCACTCACCCATTTACTTAAATGGAGTTTATGCCAGGGTTGATGTTTTGCTTGGAGGTGGGCTACGCGAGGGACAATTGACTGAAATTGTTGGGCCATCGTCTTCTGGTAAAACTCAGGTAGCTAGTTGGGCTTCTTTTGGCTGTGATGAATTTTGCATTCGATGGTGATTGCTATGATCCTACTTGAACGTTATTTCCAAAGTTTAATTATTCAACCGCTGGATTTATGCGTTAGGAACTTGATTTCTATAATTGGGTTTATTTCTCTTGACCTGTTTAATGCCCCTGGTACCATATTAGTTTGTACAAGATATGTTTGAATTTTTTAATCTATGGCAAGGTTTGTCTCCGAGCTGCTTCAAATGTGGCAACGAACTACAATGCTGAGGTTTTCTACTTGGACACGGGGAATTCCTTTTCACCCCAACGCATCTCAGGCTTTGTTAATTGGAAGCCTGGAACTGCTTTAGATCGGGTAACTAAACTACATGTGGCTGTTGGAACTTTTTGTTCTTTAAGATTGGAAATAACCGATCTCCTTGAGTCAAAATTATGGTCTACATTCTAGAAAAGAGTGACAACCACTTCAACTACCCATCATTCTAGCGAAAATTGGTTACCTCTGGCCATTGTTATGTAGAATCTCATAAAATGTCGTCCCAAATTAGCAGTTTGGGGCCCTCAACTACTCAAGCAATTCGGTGTAGGAGTGCTATTAATTCAACAAATTTAGCAACTTCAGAAATACAATCTTGTATATTTTTTTTTTCCCAAACCTTAAGCAATCTCATAATATGATGTGATGGTGTATTGTTTAAACAGGAGAAGGTTTAGGGATCAAATACTTGCACATTGCATCCTATTATTTATAACCTCTTCTCATAACGATGGAGATGAACATGCAGGCTAGGTAATGATTGTTTTTGTGCAAGTATTTGGTCCCATTAAGTCTTTTCTTTTGTTTAAAAGATATAAAATTGTGTTATGAGATCGTTGAAGGCTTAGAAAAACAAATATTATACTTTCTTAATTATTTGGGTTGCTTTATTACTTACGTTGCTAAGTTGCTAGTCCAGCCAGGACAAACTGCTGGTTTGCGAACGTTCTGACATTCTATATAACCATGGCTGGAGTAAACAGTTGCCTTCATTTCCCTTTCTTGTGACTCATTCTTATATTCTCTATATTTTCATTTTCCAAGTTTGTATTTTTTGAATGCTTCAACTTCATCTGGCTCTGTCTCTTGAATCCATTTCATAGACTGAGCAGAGCATGCTTCAACAAGTAATGAGCAGTATTTCATGTCACTCTGTGTTCGACATTTTCGCAATGTTTGATGTCTTGCATCAGCTGGAATTCAATTTGAGATCCCAGGTTGGCAGGTTCACATTAACACAATGCATCTTAGGTGGTGAGTTTGACCCGGCGTGATTTTTTAAATGCCAATTAACAATCTAAAACCATATCAGATGTGCAAAAGGGATCGGAGAGTGCAGTTACTGATTGTAGATTCGATTTCTTCGCTAATTACACCCATCCTTGGTGGAAGTAGTTCACAGGGTACGCATGATTGGATGTAGATCACTGTATATCCTTCATATATGCATAATTTGTTGAGCTTGATTGAAAGCGCATGTCCAATTTCTAGGTTCTTCAGACAATACAAAGGTATTGCATGTCCTTCATGAAAGGAATTCTGCGTATTACATATACAGGTGCTTAGACAAGATGTTTCTGAAGGTTTATTTATGACTGTGATAATTGTTGTTATGTACCAAGTGACTTGATCTTGGACATTTGCTTGCTTTGGTTGTCATTTCAGATTTCATTACACTTTTATGTTCAATTCTATGGTTTTAAAAAATAGTTATTAATTAAATGTTGAATTAGATGCATTAATCTGTAAGAACTTCATATGTTAGACTTCTATATACAATAAAAAGGAAGATTCATACTTGATGAGTATGTACAGGACATGCTTTGATGATATCTGCTGGAACACTACTGAAGAAAATAGCTCATGAACATAATATAGCAGTACTGGTAATTTCTTACTTGAAGGTTTATCAATTACGTATATGGCTCTGTCAACAGTAAATGTTTCTTAACCCTTCTCTGATTTTAAGTAATTTGTCCTAAACTTCTGCTCTCCTTCTCTTCACTTCATTCCTTTTGTCTCTTCGTGTATAGAACTCCCCCAATTAACATTATGATATTTTTAATTTTAACTAATAAAGAATAAATTAAATACACTTTTTCTTGACTTCCAGTAACTCGTAATTGTAATGCCAAAGGTAACGAATCACACTGTGGGTGGAGATAGAGGTACTTCAAAACCTGCCCTAGGAGAGAGTTGGAAGAGTGTTCCACACGTGAGGCTTCAGCTTTCCCGAGATGCAGGAAGCAATGTCTGCCAAGCTTCAATATTAAAACACTCATTCATGGTATATTCCTTTATGCACATGCATCATTGAGCACATCTGCAAAGTGTTCTGTTTACATTTTATTTAACACAAGAAGCTGCTTGTCCTCGTTTTTTAACTAGTTTATCTAAGAAAAGAAAATTTTATCTTGTTGGAATGCATTGAATCTATTATCTGACATTTCGAATGACCAAGCACGGGGCCTCGTTGCTGAGTTGAGTCGGGGTCCAGGGGAACGCATCATGGTGGAGGCAATTCCCTCAAAACCTAAATTGTATACAATTTATATGTAATCTACGATTTTGGGCCTTTGGTTTAGAGGGGTGTCTAATCTCACTGGCGCCTCATATCTATATTTTCTGATATTCTCCTCAAATAATAAAATTGTTTTCTCCCTCTACCCCTAGACATAGCTAACATACTGTTAGTGAACCACATAAATCTTTGTATCGTTCTTTACTGTTCACGCTTCCTCTGGTTGTTGATTTTGTTTATGTCATAACACATTTTTTTGGAGAACAATTTGATTGGATCATAGAAACTAGACAACTTGCTTAATTTCGTTATGCTGATTTGCCTTTTGTTTACTATCTCAGGCATCTGGTATGACTGTAAGATTCGTAATTTATGAATGAAAAGAAGGAACTCCTTGTACGTTGAACTAGAAAATGGCAACCTCAACTGGGATTCTTTAGTTCAAATGGAGCCTGGAGGTCAGTACAAAGACATGTTGCTAGCTTTTGTTGGTTGCTTTATCTGTAAAATATCTTGATGACTA

mRNA sequence

ATGGCGCCATTGAAGTCTCTGGAGCAGGTTTGCGCACTCATAGACTCTAATTTCCAGACATTTTGTGCTTCACACGGCATTTTCACTGGTACTTTCTTCTTCTTCCCATTTGATTTTGATTCAATTTTCAATATAAAACTCCATCATTTTGATTTGCTGCCAGTGGAGGATTTCCTCATCCATGACCTATACGTTTTAGCTGCTTTTGCAGAGCAACAGCCTGCATCCGAGAAATTGAAGCAGGGGATTACCCAAATCCTTTCAATTATTGATGCTGCTGAGCGACAACCATGGATGAACGGTCTGGAGCTTTTGGAAGATGCTGGAGAAAACAAGCATGTTCTGTCCACTGGTTTTGAAGGGGTTGATGTTTTGCTTGGAGGTGGGCTACGCGAGGGACAATTGACTGAAATTGTTGGGCCATCGTCTTCTGGTAAAACTCAGGTTTGTCTCCGAGCTGCTTCAAATGTGGCAACGAACTACAATGCTGAGGTTTTCTACTTGGACACGGGGAATTCCTTTTCACCCCAACGCATCTCAGGCTTTGTTAATTGGAAGCCTGGAACTGCTTTAGATCGGACTGAGCAGAGCATGCTTCAACAAGTAATGAGCAGTATTTCATGTCACTCTGTGTTCGACATTTTCGCAATGTTTGATGTCTTGCATCAGCTGGAATTCAATTTGAGATCCCAGATGTGCAAAAGGGATCGGAGAGTGCAGTTACTGATTGTAGATTCGATTTCTTCGCTAATTACACCCATCCTTGGTGGAAGTAGTTCACAGGGTTCTTCAGACAATACAAAGGTATTGCATGTCCTTCATGAAAGGAATTCTGCGTATTACATATACAGGTGCTTAGACAAGATGTTTCTGAAGATTTCATTACACTTTTATGTTCAATTCTATGGACATGCTTTGATGATATCTGCTGGAACACTACTGAAGAAAATAGCTCATGAACATAATATAGCAGTACTGGTAACGAATCACACTGTGGGTGGAGATAGAGGTACTTCAAAACCTGCCCTAGGAGAGAGTTGGAAGAGTGTTCCACACGTGAGGCTTCAGCTTTCCCGAGATGCAGGAAGCAATGTCTGCCAAGCTTCAATATTAAAACACTCATTCATGGCATCTGGTATGACTGTAAGATTCGTAATTTATGAATGAAAAGAAGGAACTCCTTGTACGTTGAACTAGAAAATGGCAACCTCAACTGGGATTCTTTAGTTCAAATGGAGCCTGGAGGTCAGTACAAAGACATGTTGCTAGCTTTTGTTGGTTGCTTTATCTGTAAAATATCTTGATGACTA

Coding sequence (CDS)

ATGGCGCCATTGAAGTCTCTGGAGCAGGTTTGCGCACTCATAGACTCTAATTTCCAGACATTTTGTGCTTCACACGGCATTTTCACTGGTACTTTCTTCTTCTTCCCATTTGATTTTGATTCAATTTTCAATATAAAACTCCATCATTTTGATTTGCTGCCAGTGGAGGATTTCCTCATCCATGACCTATACGTTTTAGCTGCTTTTGCAGAGCAACAGCCTGCATCCGAGAAATTGAAGCAGGGGATTACCCAAATCCTTTCAATTATTGATGCTGCTGAGCGACAACCATGGATGAACGGTCTGGAGCTTTTGGAAGATGCTGGAGAAAACAAGCATGTTCTGTCCACTGGTTTTGAAGGGGTTGATGTTTTGCTTGGAGGTGGGCTACGCGAGGGACAATTGACTGAAATTGTTGGGCCATCGTCTTCTGGTAAAACTCAGGTTTGTCTCCGAGCTGCTTCAAATGTGGCAACGAACTACAATGCTGAGGTTTTCTACTTGGACACGGGGAATTCCTTTTCACCCCAACGCATCTCAGGCTTTGTTAATTGGAAGCCTGGAACTGCTTTAGATCGGACTGAGCAGAGCATGCTTCAACAAGTAATGAGCAGTATTTCATGTCACTCTGTGTTCGACATTTTCGCAATGTTTGATGTCTTGCATCAGCTGGAATTCAATTTGAGATCCCAGATGTGCAAAAGGGATCGGAGAGTGCAGTTACTGATTGTAGATTCGATTTCTTCGCTAATTACACCCATCCTTGGTGGAAGTAGTTCACAGGGTTCTTCAGACAATACAAAGGTATTGCATGTCCTTCATGAAAGGAATTCTGCGTATTACATATACAGGTGCTTAGACAAGATGTTTCTGAAGATTTCATTACACTTTTATGTTCAATTCTATGGACATGCTTTGATGATATCTGCTGGAACACTACTGAAGAAAATAGCTCATGAACATAATATAGCAGTACTGGTAACGAATCACACTGTGGGTGGAGATAGAGGTACTTCAAAACCTGCCCTAGGAGAGAGTTGGAAGAGTGTTCCACACGTGAGGCTTCAGCTTTCCCGAGATGCAGGAAGCAATGTCTGCCAAGCTTCAATATTAAAACACTCATTCATGGCATCTGGTATGACTGTAAGATTCGTAATTTATGAATGA

Protein sequence

MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNSAYYIYRCLDKMFLKISLHFYVQFYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVCQASILKHSFMASGMTVRFVIYE
BLAST of ClCG02G020670 vs. Swiss-Prot
Match: RA51D_ARATH (DNA repair protein RAD51 homolog 4 OS=Arabidopsis thaliana GN=RAD51D PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-64
Identity = 141/286 (49.30%), Postives = 184/286 (64.34%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLK LE+   +ID+ FQ FCASHGI T                         +EDFL+
Sbjct: 1   MAPLKHLEKENPIIDACFQDFCASHGILT-------------------------IEDFLL 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HDLY L AF+++Q  +++LK+GIT ILS+I+   R P +NGL+LLED   NKH LSTG +
Sbjct: 61  HDLYELTAFSQRQTNADRLKEGITLILSLIERQCR-PLVNGLKLLEDLHRNKHTLSTGDK 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
             D LL GG REGQLTE+VGPSSSGKTQ C++AA++VA N+   V YLDTGNSFS +RI+
Sbjct: 121 ETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIA 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            F+          ++ ++ Q+VMS I CH+V+DI+ +FD L  LE  LR QM   + R++
Sbjct: 181 QFI-------CSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLR 240

Query: 241 LLIVDSISSLITPILGGSSSQGSSDNTKVLHVL----HERNSAYYI 283
           LL+VDSISSLITPILGGS SQG +    + ++L    HE + A  +
Sbjct: 241 LLVVDSISSLITPILGGSGSQGRALMVAIGYLLKKLAHEHSIAILV 253


HSP 2 Score: 106.7 bits (265), Expect = 5.9e-22
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVG--GDRGTSKPALGESWKSVPHVRLQLSRD 362
           G ALM++ G LLKK+AHEH+IA+LVTNHTVG  G+ G +KPALGE+WKS+PHVRL LSRD
Sbjct: 229 GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSRD 288

Query: 363 AGSNVCQASILKHSFMASGMTVR 384
             ++ C  SILKH+ + SG   +
Sbjct: 289 HKNSNCTISILKHTSLPSGQAAK 311

BLAST of ClCG02G020670 vs. Swiss-Prot
Match: RA51D_HUMAN (DNA repair protein RAD51 homolog 4 OS=Homo sapiens GN=RAD51D PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-21
Identity = 88/267 (32.96%), Postives = 116/267 (43.45%), Query Frame = 1

Query: 99  MNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA 158
           +NG +L E+   +  +LSTG   +D LL  GL  G++TEIVG   SGKTQVCL  A+NVA
Sbjct: 66  VNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVA 125

Query: 159 TNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMF 218
                 V Y+D+    +  R+   +  K     D  EQ+   + +  I     FDIF M 
Sbjct: 126 HGLQQNVLYVDSNGGLTASRLLQLLQAK---TQDEEEQA---EALRRIQVVHAFDIFQML 185

Query: 219 DVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNS 278
           DVL +L   +  Q+                             GSS   KV+ V      
Sbjct: 186 DVLQELRGTVAQQV----------------------------TGSSGTVKVVVV------ 245

Query: 279 AYYIYRCLDKMFLKIS-LHFYVQFYGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDR 338
                   D +   +S L    Q  G ALM+     LK +A +  +AV+VTNH T   D 
Sbjct: 246 --------DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITRDRDS 284

Query: 339 GTSKPALGESWKSVPHVRLQLSRDAGS 364
           G  KPALG SW  VP  R+ L    G+
Sbjct: 306 GRLKPALGRSWSFVPSTRILLDTIEGA 284

BLAST of ClCG02G020670 vs. Swiss-Prot
Match: RA51D_BOVIN (DNA repair protein RAD51 homolog 4 OS=Bos taurus GN=RAD51D PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.9e-21
Identity = 87/265 (32.83%), Postives = 112/265 (42.26%), Query Frame = 1

Query: 100 NGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAT 159
           NG +L E+   +  +LSTG   +D LL  GL  G++TEIVG   SGKTQVCL  A++VA 
Sbjct: 67  NGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVCLCVAAHVAH 126

Query: 160 NYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFD 219
                V Y+D+    +  RI   +  +     D  EQ+     +  I     FDIF M D
Sbjct: 127 GLQQNVLYIDSNGGLTASRILQLLQARTP---DEEEQA---GALQRIQVVRAFDIFQMLD 186

Query: 220 VLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNSA 279
           VL  L                                G+ SQ  S ++  L V+   + A
Sbjct: 187 VLQDLR-------------------------------GAVSQQVSSSSGTLKVVVVDSVA 246

Query: 280 YYIYRCLDKMFLKISLHFYVQFYGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGT 339
             +   L             Q  G ALM+     LK +A + ++AVLVTNH T   D G 
Sbjct: 247 AVVAPLLGGQ----------QREGLALMMQLARELKTLARDLSVAVLVTNHMTRDRDSGQ 284

Query: 340 SKPALGESWKSVPHVRLQLSRDAGS 364
            KPALG SW  VP  RL L     S
Sbjct: 307 LKPALGRSWSFVPSTRLLLDSTQSS 284

BLAST of ClCG02G020670 vs. Swiss-Prot
Match: RA51D_MOUSE (DNA repair protein RAD51 homolog 4 OS=Mus musculus GN=Rad51d PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.5e-21
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 1

Query: 99  MNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA 158
           +NG +L E+   +  +LSTG   +D LL  GL  G++TEIVG   SGKTQVCL  A+NVA
Sbjct: 66  LNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCVAANVA 125

Query: 159 TNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMF 218
            +    V Y+D+    +  R+   +  +  T  +  + S LQ++    S    FDIF M 
Sbjct: 126 HSLQQNVLYVDSNGGMTASRLLQLLQAR--TQDEEKQASALQRIQVVRS----FDIFRML 185

Query: 219 DVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQG 263
           D+L  L   +  Q       V+++IVDS+++++ P+LGG   +G
Sbjct: 186 DMLQDLRGTIAQQEATSSGAVKVVIVDSVTAVVAPLLGGQQREG 223


HSP 2 Score: 45.4 bits (106), Expect = 1.6e-03
Identity = 28/68 (41.18%), Postives = 34/68 (50.00%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPALGESWKSVPHVRLQLSRDA 362
           G ALM+     LK +A +  +AV+VTNH T   D    KPALG SW  VP  R+ L    
Sbjct: 223 GLALMMQLARELKILARDLGVAVVVTNHLTRDWDGRRFKPALGRSWSFVPSTRILLDVTE 282

Query: 363 GSNVCQAS 370
           G+    +S
Sbjct: 283 GAGTLGSS 290

BLAST of ClCG02G020670 vs. Swiss-Prot
Match: RA51D_DICDI (Probable DNA repair protein RAD51 homolog 4 OS=Dictyostelium discoideum GN=rad51d PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16
Identity = 75/262 (28.63%), Postives = 120/262 (45.80%), Query Frame = 1

Query: 99  MNGLELLEDAGENKHVLSTGFEGVDVLLGG-GLREGQLTEIVGPSSSGKTQVCLRAASNV 158
           +NG +   D  E K   S+G + +D LLGG G   G++ E+VG +S GKTQ+ +  + N+
Sbjct: 73  INGYQHYLDVKEFKTHYSSGIKLLDQLLGGNGFTSGEIYELVGNTSCGKTQISMCCSLNL 132

Query: 159 ATNYNAEVFYLDTGNSFSPQRISGFVNWKPGTAL-DRTEQSMLQQVMSSISCHSVFDIFA 218
           +  YN+ + Y+D+ NSFSP R+     +K    +  R +Q   QQ           D   
Sbjct: 133 SQQYNSNIIYIDSSNSFSPPRLIEI--FKSNYLIKQRQKQQQKQQQKQHQKQQENNDKIE 192

Query: 219 MFDVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHER 278
              +L  L+  ++   C  D    L ++ +I S ++ I         SD          +
Sbjct: 193 QDKILKILD-RIKVFNCF-DSITLLELLSTIDSTLSII---------SDEIPTFENQFYK 252

Query: 279 NSAYYIYRCLDKMFLKISLHFYVQFYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDR 338
                +   +  +   I      Q  GH  M+    L+K IA  + I  L+TN+TVGG+ 
Sbjct: 253 GLKMVVIDSIGTLLAPIIGGKQTQ--GHYTMMMISRLIKYIADTYQIIFLITNNTVGGNS 312

Query: 339 GTSKPALGESWKSVPHVRLQLS 359
             +K ALGE+W  VP+ +L ++
Sbjct: 313 FDNKAALGEAWSMVPNHQLMIN 319

BLAST of ClCG02G020670 vs. TrEMBL
Match: A0A0A0KCU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G302700 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 219/286 (76.57%), Postives = 234/286 (81.82%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLKSLE++C  IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKSLEELCPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
            DLYVLAAFAEQQPASEKLKQGITQILSIIDA ERQPW+NGLELLEDA ENK++LS GFE
Sbjct: 61  RDLYVLAAFAEQQPASEKLKQGITQILSIIDATERQPWVNGLELLEDARENKNILSIGFE 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA NY AEVFY+DTGNSFSPQRIS
Sbjct: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYKAEVFYMDTGNSFSPQRIS 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
           GFVNWKPGTALD +EQSMLQ+VM+SISCHSVF+IFA+FDVLHQLEFNLRSQ CK DRRVQ
Sbjct: 181 GFVNWKPGTALDWSEQSMLQRVMTSISCHSVFNIFALFDVLHQLEFNLRSQTCKGDRRVQ 240

Query: 241 LLIVDSISSLITPILGGSSSQGS----SDNTKVLHVLHERNSAYYI 283
           LLI+DSISSLITPILGGSSSQG     S  T +  + HE N A  +
Sbjct: 241 LLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLV 261

BLAST of ClCG02G020670 vs. TrEMBL
Match: A0A0A0KCU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G302700 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.3e-39
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 362
           GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG
Sbjct: 237 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 296

Query: 363 SNVCQASILKHSFMASGMTVRFVIYE 389
           SNVCQASILKHS MASGMT RFVIYE
Sbjct: 297 SNVCQASILKHSSMASGMTARFVIYE 322


HSP 2 Score: 369.8 bits (948), Expect = 4.1e-99
Identity = 210/386 (54.40%), Postives = 254/386 (65.80%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MA L +LE    ++DS  + FCASHGIF+                         VEDFLI
Sbjct: 1   MARLANLETEYPVLDSTVRNFCASHGIFS-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HDLY+LAAFAEQ  +SE+LK+GI Q+LSIID    QPW+NG+ELLEDA  NKHV  TG +
Sbjct: 61  HDLYMLAAFAEQNDSSERLKEGIAQVLSIIDDMH-QPWLNGMELLEDAKRNKHVFPTGIQ 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           G+D+LLG G+  GQLTE+VGPSSSGKTQVCLR ASNVA N+   V YLDTGNSFSPQRI+
Sbjct: 121 GIDLLLGDGIHVGQLTELVGPSSSGKTQVCLRTASNVARNHM--VLYLDTGNSFSPQRIA 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            F+      +  + +   LQ+VMS+ISCHSVFDIFAMFDVLHQLE  LR Q  +   +++
Sbjct: 181 YFLGKTISPSSAQAKNQFLQKVMSNISCHSVFDIFAMFDVLHQLESYLRCQDGRGGCQMR 240

Query: 241 LLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNSAYYIYRCLDKMFLKISLHFYVQ 300
           LLIVDSISSLI+P+LG SS+ G   N+K++                              
Sbjct: 241 LLIVDSISSLISPVLGSSSTLGVI-NSKLMDT---------------------------- 300

Query: 301 FYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRD 360
             G ALM SAG LLKK+AH+HN+AVL+ NHTVGG+ G+SKPALG+SWK +PH RL LS D
Sbjct: 301 --GRALMTSAGYLLKKLAHQHNLAVLIINHTVGGEGGSSKPALGDSWKCIPHSRLFLSCD 327

Query: 361 AGSNVCQASILKHSFMASGMTVRFVI 387
            GSN    SIL+H  MASG   RFVI
Sbjct: 361 RGSNTYNVSILRHPSMASGKAARFVI 327

BLAST of ClCG02G020670 vs. TrEMBL
Match: A5ARD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003133 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.9e-96
Identity = 206/381 (54.07%), Postives = 247/381 (64.83%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           M  LKSLE    +IDS+FQ FCASHGIF+                         VED LI
Sbjct: 1   MGSLKSLECEYPIIDSDFQNFCASHGIFS-------------------------VEDILI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HDLY+L AFAEQQ  SE+LKQGITQILSIID  + QPW+NG+ELLEDA +NK VLSTG E
Sbjct: 61  HDLYMLVAFAEQQSTSERLKQGITQILSIIDG-QHQPWLNGMELLEDAQQNKQVLSTGCE 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           G+D+LL GGL  G LTE+VGPSSSGKTQ+CL+ AS VAT Y   V ++DTGNSFSP RI+
Sbjct: 121 GIDMLLQGGLCVGHLTELVGPSSSGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIA 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            F+N  P T     +Q++L++VMS I CHSVFDIFAM DV+HQLE++LRSQ+     +V+
Sbjct: 181 HFINQIPDTIFKEVKQNILEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVR 240

Query: 241 LLIVDSISSLITPILGGSSSQGS----SDNTKVLHVLHERNSAYYIYRCLDKMFLKISLH 300
           LLIVDSISSLITPILGGS S G     S    +  + HE N A           +K+S+ 
Sbjct: 241 LLIVDSISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVV-------PIIKVSIL 300

Query: 301 FYVQFYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQ 360
             +    H L                    VTNH VGG+ G  KPALGESWKS+PHVRL 
Sbjct: 301 TIITIMIHWLK-------------------VTNHMVGGEGGILKPALGESWKSIPHVRLL 329

Query: 361 LSRDAGSNVCQASILKHSFMA 378
           LSRD GS++C  SILKHS+M+
Sbjct: 361 LSRDPGSSICHMSILKHSYMS 329

BLAST of ClCG02G020670 vs. TrEMBL
Match: B9SYN5_RICCO (DNA repair and recombination protein radB, putative OS=Ricinus communis GN=RCOM_0787740 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.8e-95
Identity = 203/386 (52.59%), Postives = 244/386 (63.21%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLKSLE+  +++DSNFQ+FCASH IFT                         VEDFLI
Sbjct: 1   MAPLKSLEKSYSILDSNFQSFCASHAIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
            DL  LA  AEQ+P S++LK+GI QILSIID  + QPW+NG +LL+DA +NKHVLSTGF+
Sbjct: 61  QDLDALATLAEQEPTSQRLKEGINQILSIIDKQQHQPWLNGFQLLKDALQNKHVLSTGFD 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           G+D LLGGG+REGQLTE+VG SSSGKTQVCL+ A+NVA  +   V ++DTGNSFSP+RI 
Sbjct: 121 GIDSLLGGGVREGQLTELVGSSSSGKTQVCLQVAANVAKQHMGRVIFVDTGNSFSPRRIE 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            FV    G+AL++T       VMS+I CHSVFDIF+MFDVLHQLE +LRS          
Sbjct: 181 QFVGRISGSALNQT-------VMSNILCHSVFDIFSMFDVLHQLEISLRS---------- 240

Query: 241 LLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNSAYYIYRCLDKMFLKISLHFYVQ 300
                               QG S + KV  ++ +  S+           L   +     
Sbjct: 241 --------------------QGHSGDFKVQSLIVDSISS-----------LITPILGGGG 300

Query: 301 FYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRD 360
             GHALM SAG LLKK+AHEHNIAVLVTNH V G+ G  KPALGESWKS+PHVRL LSRD
Sbjct: 301 SQGHALMTSAGILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRD 313

Query: 361 AGSNVCQASILKHSFMASGMTVRFVI 387
            G NVC  +ILKH   ASG   RF +
Sbjct: 361 QGKNVCNVTILKHPSQASGKAARFTV 313

BLAST of ClCG02G020670 vs. TrEMBL
Match: A0A067L6U7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05648 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94
Identity = 204/386 (52.85%), Postives = 248/386 (64.25%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLKSLE   +++DSNFQ FCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKSLEAQYSILDSNFQLFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HD+ VL A AEQ+P S +LK+GITQ+LSIID  + QPW NGL+LLEDA +NKHVLSTGFE
Sbjct: 61  HDVSVLTALAEQKPFSGRLKEGITQMLSIIDE-QHQPWSNGLQLLEDALQNKHVLSTGFE 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           G+D LLGGG+REGQLTE+VGPSSSGKTQVCL+ A+NVA  +   V ++DTGNSFSPQRI 
Sbjct: 121 GIDALLGGGVREGQLTELVGPSSSGKTQVCLQVAANVAIQHTGSVIFMDTGNSFSPQRIE 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            FV+   G+A +   ++ +Q+VMS+I CHSVFDIF+MFDVL Q+E  L+           
Sbjct: 181 HFVHRISGSAFN---ENFVQKVMSNILCHSVFDIFSMFDVLRQVEIGLK----------- 240

Query: 241 LLIVDSISSLITPILGGSSSQGSSDNTKVLHVLHERNSAYYIYRCLDKMFLKISLHFYVQ 300
                              SQ    + KV  ++ +  S+           L   +     
Sbjct: 241 -------------------SQQCKGDCKVRSIIVDSISS-----------LITPVLGGSG 300

Query: 301 FYGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRD 360
             GHALM SAG LLKK+AHEHNIAVLVTNH V G+ G  KPALGESWKS+PHVRL LS D
Sbjct: 301 SQGHALMTSAGFLLKKLAHEHNIAVLVTNHMVTGEGGNPKPALGESWKSIPHVRLLLSCD 316

Query: 361 AGSNVCQASILKHSFMASGMTVRFVI 387
             +N C+ SILKH+ +ASG T RFV+
Sbjct: 361 HRNNACKISILKHTSLASGETARFVV 316

BLAST of ClCG02G020670 vs. TAIR10
Match: AT1G07745.1 (AT1G07745.1 homolog of RAD51 D)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-65
Identity = 141/286 (49.30%), Postives = 184/286 (64.34%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLK LE+   +ID+ FQ FCASHGI T                         +EDFL+
Sbjct: 1   MAPLKHLEKENPIIDACFQDFCASHGILT-------------------------IEDFLL 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HDLY L AF+++Q  +++LK+GIT ILS+I+   R P +NGL+LLED   NKH LSTG +
Sbjct: 61  HDLYELTAFSQRQTNADRLKEGITLILSLIERQCR-PLVNGLKLLEDLHRNKHTLSTGDK 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
             D LL GG REGQLTE+VGPSSSGKTQ C++AA++VA N+   V YLDTGNSFS +RI+
Sbjct: 121 ETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIA 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
            F+          ++ ++ Q+VMS I CH+V+DI+ +FD L  LE  LR QM   + R++
Sbjct: 181 QFI-------CSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRLR 240

Query: 241 LLIVDSISSLITPILGGSSSQGSSDNTKVLHVL----HERNSAYYI 283
           LL+VDSISSLITPILGGS SQG +    + ++L    HE + A  +
Sbjct: 241 LLVVDSISSLITPILGGSGSQGRALMVAIGYLLKKLAHEHSIAILV 253


HSP 2 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVG--GDRGTSKPALGESWKSVPHVRLQLSRD 362
           G ALM++ G LLKK+AHEH+IA+LVTNHTVG  G+ G +KPALGE+WKS+PHVRL LSRD
Sbjct: 229 GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSRD 288

Query: 363 AGSNVCQASILKHSFMASGMTVR 384
             ++ C  SILKH+ + SG   +
Sbjct: 289 HKNSNCTISILKHTSLPSGQAAK 311

BLAST of ClCG02G020670 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 48/182 (26.37%), Postives = 75/182 (41.21%), Query Frame = 1

Query: 115 LSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVC--LRAASNVATNY---NAEVFYLD 174
           ++TG + +D LLGGG+    +TE  G   SGKTQ+   L   + + TN    N +V Y+D
Sbjct: 108 ITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYID 167

Query: 175 TGNSFSPQRISGFV---NWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEF 234
           T  +F P RI          PG  LD                + ++     ++  + L  
Sbjct: 168 TEGTFRPDRIVPIAERFGMDPGAVLD----------------NIIYARAYTYEHQYNLLL 227

Query: 235 NLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSSDN------TKVLHVLHERNSAY 283
            L ++M +   R+  LIVDSI +L      G               ++++ +  E N A 
Sbjct: 228 GLAAKMSEEPFRI--LIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAV 271

BLAST of ClCG02G020670 vs. NCBI nr
Match: gi|778714514|ref|XP_011657248.1| (PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 1.6e-112
Identity = 219/286 (76.57%), Postives = 234/286 (81.82%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLKSLE++C  IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKSLEELCPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
            DLYVLAAFAEQQPASEKLKQGITQILSIIDA ERQPW+NGLELLEDA ENK++LS GFE
Sbjct: 61  RDLYVLAAFAEQQPASEKLKQGITQILSIIDATERQPWVNGLELLEDARENKNILSIGFE 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
           GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA NY AEVFY+DTGNSFSPQRIS
Sbjct: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYKAEVFYMDTGNSFSPQRIS 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
           GFVNWKPGTALD +EQSMLQ+VM+SISCHSVF+IFA+FDVLHQLEFNLRSQ CK DRRVQ
Sbjct: 181 GFVNWKPGTALDWSEQSMLQRVMTSISCHSVFNIFALFDVLHQLEFNLRSQTCKGDRRVQ 240

Query: 241 LLIVDSISSLITPILGGSSSQGS----SDNTKVLHVLHERNSAYYI 283
           LLI+DSISSLITPILGGSSSQG     S  T +  + HE N A  +
Sbjct: 241 LLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLV 261

BLAST of ClCG02G020670 vs. NCBI nr
Match: gi|778714514|ref|XP_011657248.1| (PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 9.0e-39
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 362
           GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG
Sbjct: 237 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 296

Query: 363 SNVCQASILKHSFMASGMTVRFVIYE 389
           SNVCQASILKHS MASGMT RFVIYE
Sbjct: 297 SNVCQASILKHSSMASGMTARFVIYE 322


HSP 2 Score: 413.3 bits (1061), Expect = 4.7e-112
Identity = 219/286 (76.57%), Postives = 231/286 (80.77%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLK LE++   IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKFLEELYPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDAAERQPWMNGLELLEDAGENKHVLSTGFE 120
           HDLYVLAAFAEQQPASEKLKQGITQILSIID  ERQPW+NGLELLEDA ENKH+LS GFE
Sbjct: 61  HDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFE 120

Query: 121 GVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVATNYNAEVFYLDTGNSFSPQRIS 180
            VDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA NYNAEVFY+DTGNSFSPQRIS
Sbjct: 121 RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRIS 180

Query: 181 GFVNWKPGTALDRTEQSMLQQVMSSISCHSVFDIFAMFDVLHQLEFNLRSQMCKRDRRVQ 240
           GFVNWKPGTALD +EQSMLQQVMSSISCHSVFDIFA+FDVLH+LEFNLRSQ CK DRRVQ
Sbjct: 181 GFVNWKPGTALDWSEQSMLQQVMSSISCHSVFDIFALFDVLHRLEFNLRSQTCKGDRRVQ 240

Query: 241 LLIVDSISSLITPILGGSSSQGS----SDNTKVLHVLHERNSAYYI 283
            LI+DSISSLITPILGGSSSQG     S  T +  + HE N A  +
Sbjct: 241 FLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLV 261

BLAST of ClCG02G020670 vs. NCBI nr
Match: gi|659095038|ref|XP_008448361.1| (PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 7.1e-36
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 362
           GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG
Sbjct: 237 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 296

Query: 363 SNVCQASILKHSFMASGMTVRFVIYE 389
           SNV QASILKHS MASG   RFV+YE
Sbjct: 297 SNVYQASILKHSSMASGTAARFVMYE 322


HSP 2 Score: 400.2 bits (1027), Expect = 4.1e-108
Identity = 219/313 (69.97%), Postives = 234/313 (74.76%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLKSLE++C  IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKSLEELCPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQ---------------------------GITQILSIIDAA 120
            DLYVLAAFAEQQPASEKLKQ                           GITQILSIIDA 
Sbjct: 61  RDLYVLAAFAEQQPASEKLKQVKHSLHFPFSCLSFTVLNFSIPCMCTQGITQILSIIDAT 120

Query: 121 ERQPWMNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180
           ERQPW+NGLELLEDA ENK++LS GFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA
Sbjct: 121 ERQPWVNGLELLEDARENKNILSIGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180

Query: 181 ASNVATNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFD 240
           ASNVA NY AEVFY+DTGNSFSPQRISGFVNWKPGTALD +EQSMLQ+VM+SISCHSVF+
Sbjct: 181 ASNVAKNYKAEVFYMDTGNSFSPQRISGFVNWKPGTALDWSEQSMLQRVMTSISCHSVFN 240

Query: 241 IFAMFDVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGS----SDNTKV 283
           IFA+FDVLHQLEFNLRSQ CK DRRVQLLI+DSISSLITPILGGSSSQG     S  T +
Sbjct: 241 IFALFDVLHQLEFNLRSQTCKGDRRVQLLIIDSISSLITPILGGSSSQGHALMISAGTLL 288

BLAST of ClCG02G020670 vs. NCBI nr
Match: gi|778714511|ref|XP_011657247.1| (PREDICTED: DNA repair protein RAD51 homolog 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 9.0e-39
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 362
           GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG
Sbjct: 264 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 323

Query: 363 SNVCQASILKHSFMASGMTVRFVIYE 389
           SNVCQASILKHS MASGMT RFVIYE
Sbjct: 324 SNVCQASILKHSSMASGMTARFVIYE 349


HSP 2 Score: 398.7 bits (1023), Expect = 1.2e-107
Identity = 219/313 (69.97%), Postives = 231/313 (73.80%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLK LE++   IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKFLEELYPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQ---------------------------GITQILSIIDAA 120
           HDLYVLAAFAEQQPASEKLKQ                           GITQILSIID  
Sbjct: 61  HDLYVLAAFAEQQPASEKLKQVKPSLHFPFSCLSFTVLNFSISCMCTQGITQILSIIDVT 120

Query: 121 ERQPWMNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180
           ERQPW+NGLELLEDA ENKH+LS GFE VDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA
Sbjct: 121 ERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180

Query: 181 ASNVATNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFD 240
           ASNVA NYNAEVFY+DTGNSFSPQRISGFVNWKPGTALD +EQSMLQQVMSSISCHSVFD
Sbjct: 181 ASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWSEQSMLQQVMSSISCHSVFD 240

Query: 241 IFAMFDVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGS----SDNTKV 283
           IFA+FDVLH+LEFNLRSQ CK DRRVQ LI+DSISSLITPILGGSSSQG     S  T +
Sbjct: 241 IFALFDVLHRLEFNLRSQTCKGDRRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL 288

BLAST of ClCG02G020670 vs. NCBI nr
Match: gi|659095036|ref|XP_008448360.1| (PREDICTED: DNA repair protein RAD51 homolog 4 isoform X1 [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 7.1e-36
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 1

Query: 303 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 362
           GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG
Sbjct: 264 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 323

Query: 363 SNVCQASILKHSFMASGMTVRFVIYE 389
           SNV QASILKHS MASG   RFV+YE
Sbjct: 324 SNVYQASILKHSSMASGTAARFVMYE 349


HSP 2 Score: 396.4 bits (1017), Expect = 5.9e-107
Identity = 214/291 (73.54%), Postives = 224/291 (76.98%), Query Frame = 1

Query: 1   MAPLKSLEQVCALIDSNFQTFCASHGIFTGTFFFFPFDFDSIFNIKLHHFDLLPVEDFLI 60
           MAPLK LE++   IDSNF TFCASHGIFT                         VEDFLI
Sbjct: 1   MAPLKFLEELYPFIDSNFLTFCASHGIFT-------------------------VEDFLI 60

Query: 61  HDLYVLAAFAEQQPASEKLKQ---------------------------GITQILSIIDAA 120
           HDLYVLAAFAEQQPASEKLKQ                           GITQILSIID  
Sbjct: 61  HDLYVLAAFAEQQPASEKLKQVKPSLHFPFSCLSFTVLNFSISCMCTQGITQILSIIDVT 120

Query: 121 ERQPWMNGLELLEDAGENKHVLSTGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180
           ERQPW+NGLELLEDA ENKH+LS GFE VDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA
Sbjct: 121 ERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRA 180

Query: 181 ASNVATNYNAEVFYLDTGNSFSPQRISGFVNWKPGTALDRTEQSMLQQVMSSISCHSVFD 240
           ASNVA NYNAEVFY+DTGNSFSPQRISGFVNWKPGTALD +EQSMLQQVMSSISCHSVFD
Sbjct: 181 ASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWSEQSMLQQVMSSISCHSVFD 240

Query: 241 IFAMFDVLHQLEFNLRSQMCKRDRRVQLLIVDSISSLITPILGGSSSQGSS 265
           IFA+FDVLH+LEFNLRSQ CK DRRVQ LI+DSISSLITPILGGSSSQG+S
Sbjct: 241 IFALFDVLHRLEFNLRSQTCKGDRRVQFLIIDSISSLITPILGGSSSQGTS 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RA51D_ARATH2.8e-6449.30DNA repair protein RAD51 homolog 4 OS=Arabidopsis thaliana GN=RAD51D PE=2 SV=2[more]
RA51D_HUMAN1.0e-2132.96DNA repair protein RAD51 homolog 4 OS=Homo sapiens GN=RAD51D PE=1 SV=1[more]
RA51D_BOVIN2.9e-2132.83DNA repair protein RAD51 homolog 4 OS=Bos taurus GN=RAD51D PE=2 SV=1[more]
RA51D_MOUSE8.5e-2135.98DNA repair protein RAD51 homolog 4 OS=Mus musculus GN=Rad51d PE=1 SV=1[more]
RA51D_DICDI1.3e-1628.63Probable DNA repair protein RAD51 homolog 4 OS=Dictyostelium discoideum GN=rad51... [more]
Match NameE-valueIdentityDescription
A0A0A0KCU0_CUCSA1.1e-11276.57Uncharacterized protein OS=Cucumis sativus GN=Csa_6G302700 PE=4 SV=1[more]
A0A0A0KCU0_CUCSA6.3e-3997.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G302700 PE=4 SV=1[more]
A5ARD8_VITVI1.9e-9654.07Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003133 PE=4 SV=1[more]
B9SYN5_RICCO2.8e-9552.59DNA repair and recombination protein radB, putative OS=Ricinus communis GN=RCOM_... [more]
A0A067L6U7_JATCU1.1e-9452.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05648 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G07745.11.6e-6549.30 homolog of RAD51 D[more]
AT3G22880.11.6e-0626.37 DNA repair (Rad51) family protein[more]
Match NameE-valueIdentityDescription
gi|778714514|ref|XP_011657248.1|1.6e-11276.57PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis sativus][more]
gi|778714514|ref|XP_011657248.1|9.0e-3997.67PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis sativus][more]
gi|659095038|ref|XP_008448361.1|7.1e-3693.02PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis melo][more]
gi|778714511|ref|XP_011657247.1|9.0e-3997.67PREDICTED: DNA repair protein RAD51 homolog 4 isoform X1 [Cucumis sativus][more]
gi|659095036|ref|XP_008448360.1|7.1e-3693.02PREDICTED: DNA repair protein RAD51 homolog 4 isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:1900426 positive regulation of defense response to bacterium
biological_process GO:0016444 somatic cell DNA recombination
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G020670.1ClCG02G020670.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51, C-terminalPFAMPF08423Rad51coord: 114..250
score: 3.6
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 111..331
score: 2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 112..388
score: 7.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 114..258
score: 2.22E-29coord: 298..386
score: 2.22
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 40..257
score: 7.9E-79coord: 299..388
score: 7.9
NoneNo IPR availablePANTHERPTHR22942:SF29DNA REPAIR PROTEIN RAD51 HOMOLOG 4coord: 40..257
score: 7.9E-79coord: 299..388
score: 7.9

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G020670Silver-seed gourdcarwcgB0152
ClCG02G020670Silver-seed gourdcarwcgB0299
ClCG02G020670Silver-seed gourdcarwcgB0327
ClCG02G020670Silver-seed gourdcarwcgB0435
ClCG02G020670Silver-seed gourdcarwcgB0973
ClCG02G020670Cucumber (Chinese Long) v3cucwcgB215
ClCG02G020670Cucumber (Chinese Long) v3cucwcgB306
ClCG02G020670Cucumber (Chinese Long) v3cucwcgB473
ClCG02G020670Watermelon (97103) v2wcgwmbB133
ClCG02G020670Watermelon (97103) v2wcgwmbB151
ClCG02G020670Watermelon (97103) v2wcgwmbB156
ClCG02G020670Wax gourdwcgwgoB257
ClCG02G020670Wax gourdwcgwgoB317
ClCG02G020670Watermelon (Charleston Gray)wcgwcgB044
ClCG02G020670Watermelon (Charleston Gray)wcgwcgB121
ClCG02G020670Watermelon (Charleston Gray)wcgwcgB129
ClCG02G020670Cucumber (Gy14) v1cgywcgB063
ClCG02G020670Cucumber (Gy14) v1cgywcgB385
ClCG02G020670Cucumber (Gy14) v1cgywcgB386
ClCG02G020670Cucumber (Gy14) v1cgywcgB526
ClCG02G020670Cucumber (Gy14) v1cgywcgB648
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB189
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB228
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB399
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB481
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB527
ClCG02G020670Cucurbita maxima (Rimu)cmawcgB734
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB180
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB211
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB397
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB479
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB525
ClCG02G020670Cucurbita moschata (Rifu)cmowcgB738
ClCG02G020670Wild cucumber (PI 183967)cpiwcgB032
ClCG02G020670Wild cucumber (PI 183967)cpiwcgB214
ClCG02G020670Wild cucumber (PI 183967)cpiwcgB304
ClCG02G020670Wild cucumber (PI 183967)cpiwcgB475
ClCG02G020670Cucumber (Chinese Long) v2cuwcgB212
ClCG02G020670Cucumber (Chinese Long) v2cuwcgB455
ClCG02G020670Melon (DHL92) v3.5.1mewcgB057
ClCG02G020670Melon (DHL92) v3.5.1mewcgB089
ClCG02G020670Melon (DHL92) v3.5.1mewcgB327
ClCG02G020670Watermelon (97103) v1wcgwmB173
ClCG02G020670Watermelon (97103) v1wcgwmB175
ClCG02G020670Watermelon (97103) v1wcgwmB181
ClCG02G020670Watermelon (97103) v1wcgwmB196
ClCG02G020670Cucurbita pepo (Zucchini)cpewcgB266
ClCG02G020670Cucurbita pepo (Zucchini)cpewcgB462
ClCG02G020670Cucurbita pepo (Zucchini)cpewcgB498
ClCG02G020670Cucurbita pepo (Zucchini)cpewcgB551
ClCG02G020670Cucurbita pepo (Zucchini)cpewcgB658
ClCG02G020670Bottle gourd (USVL1VR-Ls)lsiwcgB179
ClCG02G020670Bottle gourd (USVL1VR-Ls)lsiwcgB054
ClCG02G020670Bottle gourd (USVL1VR-Ls)lsiwcgB131
ClCG02G020670Bottle gourd (USVL1VR-Ls)lsiwcgB235
ClCG02G020670Bottle gourd (USVL1VR-Ls)lsiwcgB276
ClCG02G020670Cucumber (Gy14) v2cgybwcgB195
ClCG02G020670Cucumber (Gy14) v2cgybwcgB028
ClCG02G020670Cucumber (Gy14) v2cgybwcgB273
ClCG02G020670Cucumber (Gy14) v2cgybwcgB416
ClCG02G020670Melon (DHL92) v3.6.1medwcgB086
ClCG02G020670Melon (DHL92) v3.6.1medwcgB320