ClCG02G020210 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G020210
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 34783096 .. 34783458 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAAATCATGTAAAGAAATTAGAAGATGGCAAATTTGAGATTTTGCTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTATTTAGGAGACGAGGAAAAAGAAGTGGATCGGGGTGATGATTTGATGAAGACTCCGAGATCTTTGGAAGCTACGGCGGTTGTGATGGAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTCCCCCTCGGCGGCGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAATAA

mRNA sequence

ATGGAGGAAAATCATGTAAAGAAATTAGAAGATGGCAAATTTGAGATTTTGCTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTATTTAGGAGACGAGGAAAAAGAAGTGGATCGGGGTGATGATTTGATGAAGACTCCGAGATCTTTGGAAGCTACGGCGGTTGTGATGGAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTCCCCCTCGGCGGCGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAATAA

Coding sequence (CDS)

ATGGAGGAAAATCATGTAAAGAAATTAGAAGATGGCAAATTTGAGATTTTGCTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTATTTAGGAGACGAGGAAAAAGAAGTGGATCGGGGTGATGATTTGATGAAGACTCCGAGATCTTTGGAAGCTACGGCGGTTGTGATGGAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTCCCCCTCGGCGGCGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAATAA

Protein sequence

MEENHVKKLEDGKFEILLSTLELRLPLPSCCYLGDEEKEVDRGDDLMKTPRSLEATAVVMECPPPPRKPRRSPSAAKRKAGGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKRVE
Homology
[Close]
BLAST of ClCG02G020210 vs. TrEMBL
Match: A0A0A0KHB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190470 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-43
Identity = 97/122 (79.51%), Postives = 105/122 (86.07%), Query Frame = 1 

Query: 7   KKLEDGK----FEILLSTLELRLPLP--SCCYLGDEEKEVDRGDDLMKTPRSLEATAVVM 66
           K+ EDGK    FEILLSTLELRLPLP  S C LGD+EKEVDRGDDLMKTPRSLE T+VV+
Sbjct: 4   KRSEDGKKLEKFEILLSTLELRLPLPLPSFCCLGDKEKEVDRGDDLMKTPRSLEPTSVVL 63

Query: 67  ECPPPPRKPRRSPSAAKRKA--GGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKR 121
           +CPPPPRKPRR PSAAKRKA  GGGRSILMSHDYFF DVEL+ LFPSN+VGGKIVKK+K 
Sbjct: 64  QCPPPPRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDWLFPSNVVGGKIVKKIKG 123

[Close]
BLAST of ClCG02G020210 vs. TrEMBL
Match: W9RU29_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025220 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-06
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 2   EENHVKKLEDGKFEILLSTLELRLPLPSCCY--LGDEEKEVDRGDDLMKTPRSLE-ATAV 61
           +E   +K ED KF++L+STL+L++P P   +  L D+E  V   D   KTP SL+     
Sbjct: 51  QEEEDRKKED-KFDMLVSTLKLKIPSPDQEFRVLEDQENHVGVVDGF-KTPTSLDHKIPA 110

Query: 62  VMECPPPPRKPRRSPSAAKRKAGGGRSILMSHDYFFGDVELELLFPSNL---VGGKIVKK 119
            ++CPP PRKP+  PS  +R     R +L+         E+E LFP  +   +GGKI KK
Sbjct: 111 TLKCPPAPRKPKSLPSTKRRLPISRRRVLLDL-----TSEIESLFPPAILADLGGKI-KK 165

[Close]
BLAST of ClCG02G020210 vs. TrEMBL
Match: B9HPI0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s03550g PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-06
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 1 

Query: 10  EDGKFEILLSTLELRLPLPSCCYLGDEEKEVDRGDDLMKTPRSLEATA-VVMECPPPPRK 69
           ++ + EI + TL+++LP      + D++   D  DD  KTP SL+    V+ +CPP PRK
Sbjct: 54  QEDECEISVPTLKIKLPSVEAFQIEDDK---DDDDDGFKTPTSLDRKIPVIFQCPPAPRK 113

Query: 70  PRRSPSAAKRKAGGGRSILMSHDYFFGDVELELLFPSNLVG--GKIVKKVKR 119
           P+  PS AKRK+   R +L   +      E+E LFP  L G  G  +KKV++
Sbjct: 114 PKSLPS-AKRKSPQRRVLLDLSN------EIESLFPPALAGDLGGKIKKVRQ 155

[Close]
BLAST of ClCG02G020210 vs. NCBI nr
Match: gi|700191952|gb|KGN47156.1| (hypothetical protein Csa_6G190470 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 97/122 (79.51%), Postives = 105/122 (86.07%), Query Frame = 1 

Query: 7   KKLEDGK----FEILLSTLELRLPLP--SCCYLGDEEKEVDRGDDLMKTPRSLEATAVVM 66
           K+ EDGK    FEILLSTLELRLPLP  S C LGD+EKEVDRGDDLMKTPRSLE T+VV+
Sbjct: 4   KRSEDGKKLEKFEILLSTLELRLPLPLPSFCCLGDKEKEVDRGDDLMKTPRSLEPTSVVL 63

Query: 67  ECPPPPRKPRRSPSAAKRKA--GGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKR 121
           +CPPPPRKPRR PSAAKRKA  GGGRSILMSHDYFF DVEL+ LFPSN+VGGKIVKK+K 
Sbjct: 64  QCPPPPRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDWLFPSNVVGGKIVKKIKG 123

[Close]
BLAST of ClCG02G020210 vs. NCBI nr
Match: gi|1009115193|ref|XP_015874096.1| (PREDICTED: uncharacterized protein LOC107411099 [Ziziphus jujuba])

HSP 1 Score: 65.5 bits (158), Expect = 7.4e-08
Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1 

Query: 7   KKLEDGKFEILLSTLELRLPLPSCCYLGDEEKEVDRGD--DLMKTPRSL-EATAVVMECP 66
           KK E  KF++L+S+L+L++P      + +++K+ D  D  D  KTP S  +     + CP
Sbjct: 70  KKEEGDKFDVLVSSLKLKIPSVQEFRVKEDDKDDDNKDNNDGFKTPTSSDQKIPATLHCP 129

Query: 67  PPPRKPRRSP-SAAKRKA-GGGRSILMSHDYFFGDVELELLFP----SNLVGGKIVKKVK 119
           P PRKP+  P S+ KRKA G  R +L+         E+E LFP    ++L GGKI KKV+
Sbjct: 130 PAPRKPKSLPLSSMKRKAHGRHRQVLLDMSN-----EIESLFPPVLLADLGGGKIKKKVR 185

[Close]
BLAST of ClCG02G020210 vs. NCBI nr
Match: gi|703137513|ref|XP_010106463.1| (hypothetical protein L484_025220 [Morus notabilis])

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-06
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 2   EENHVKKLEDGKFEILLSTLELRLPLPSCCY--LGDEEKEVDRGDDLMKTPRSLE-ATAV 61
           +E   +K ED KF++L+STL+L++P P   +  L D+E  V   D   KTP SL+     
Sbjct: 51  QEEEDRKKED-KFDMLVSTLKLKIPSPDQEFRVLEDQENHVGVVDGF-KTPTSLDHKIPA 110

Query: 62  VMECPPPPRKPRRSPSAAKRKAGGGRSILMSHDYFFGDVELELLFPSNL---VGGKIVKK 119
            ++CPP PRKP+  PS  +R     R +L+         E+E LFP  +   +GGKI KK
Sbjct: 111 TLKCPPAPRKPKSLPSTKRRLPISRRRVLLDL-----TSEIESLFPPAILADLGGKI-KK 165

[Close]
BLAST of ClCG02G020210 vs. NCBI nr
Match: gi|224104447|ref|XP_002313438.1| (hypothetical protein POPTR_0009s03550g [Populus trichocarpa])

HSP 1 Score: 58.5 bits (140), Expect = 9.0e-06
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 1 

Query: 10  EDGKFEILLSTLELRLPLPSCCYLGDEEKEVDRGDDLMKTPRSLEATA-VVMECPPPPRK 69
           ++ + EI + TL+++LP      + D++   D  DD  KTP SL+    V+ +CPP PRK
Sbjct: 54  QEDECEISVPTLKIKLPSVEAFQIEDDK---DDDDDGFKTPTSLDRKIPVIFQCPPAPRK 113

Query: 70  PRRSPSAAKRKAGGGRSILMSHDYFFGDVELELLFPSNLVG--GKIVKKVKR 119
           P+  PS AKRK+   R +L   +      E+E LFP  L G  G  +KKV++
Sbjct: 114 PKSLPS-AKRKSPQRRVLLDLSN------EIESLFPPALAGDLGGKIKKVRQ 155

The following BLAST results are available for this feature:
BLAST of ClCG02G020210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHB1_CUCSA1.3e-4379.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G190470 PE=4 SV=1[more]
W9RU29_9ROSA1.3e-0638.21Uncharacterized protein OS=Morus notabilis GN=L484_025220 PE=4 SV=1[more]
B9HPI0_POPTR6.3e-0637.50Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s03550g PE=4 SV=1[more]
BLAST of ClCG02G020210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191952|gb|KGN47156.1|1.9e-4379.51hypothetical protein Csa_6G190470 [Cucumis sativus][more]
gi|1009115193|ref|XP_015874096.1|7.4e-0838.84PREDICTED: uncharacterized protein LOC107411099 [Ziziphus jujuba][more]
gi|703137513|ref|XP_010106463.1|1.8e-0638.21hypothetical protein L484_025220 [Morus notabilis][more]
gi|224104447|ref|XP_002313438.1|9.0e-0637.50hypothetical protein POPTR_0009s03550g [Populus trichocarpa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G020210.1ClCG02G020210.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G020210Csa6G190470Cucumber (Chinese Long) v2cuwcgB437
ClCG02G020210MELO3C025922Melon (DHL92) v3.5.1mewcgB108
ClCG02G020210Cla013303Watermelon (97103) v1wcgwmB197
ClCG02G020210Bhi10G000561Wax gourdwcgwgoB298
ClCG02G020210CSPI06G14520Wild cucumber (PI 183967)cpiwcgB458
ClCG02G020210Lsi10G013730Bottle gourd (USVL1VR-Ls)lsiwcgB054
ClCG02G020210MELO3C025922.2Melon (DHL92) v3.6.1medwcgB103
ClCG02G020210CsaV3_6G016910Cucumber (Chinese Long) v3cucwcgB457
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G020210Melon (DHL92) v3.6.1medwcgB320
ClCG02G020210Melon (DHL92) v3.6.1medwcgB517
ClCG02G020210Silver-seed gourdcarwcgB0152
ClCG02G020210Silver-seed gourdcarwcgB0299
ClCG02G020210Silver-seed gourdcarwcgB0327
ClCG02G020210Silver-seed gourdcarwcgB0374
ClCG02G020210Silver-seed gourdcarwcgB0435
ClCG02G020210Silver-seed gourdcarwcgB0973
ClCG02G020210Cucumber (Chinese Long) v3cucwcgB034
ClCG02G020210Cucumber (Chinese Long) v3cucwcgB215
ClCG02G020210Cucumber (Chinese Long) v3cucwcgB306
ClCG02G020210Cucumber (Chinese Long) v3cucwcgB403
ClCG02G020210Watermelon (97103) v2wcgwmbB133
ClCG02G020210Watermelon (97103) v2wcgwmbB138
ClCG02G020210Watermelon (97103) v2wcgwmbB151
ClCG02G020210Watermelon (97103) v2wcgwmbB156
ClCG02G020210Watermelon (97103) v2wcgwmbB164
ClCG02G020210Wax gourdwcgwgoB257
ClCG02G020210Wax gourdwcgwgoB315
ClCG02G020210Watermelon (Charleston Gray)wcgwcgB016
ClCG02G020210Watermelon (Charleston Gray)wcgwcgB044
ClCG02G020210Watermelon (Charleston Gray)wcgwcgB121
ClCG02G020210Watermelon (Charleston Gray)wcgwcgB129
ClCG02G020210Watermelon (Charleston Gray)wcgwcgB136
ClCG02G020210Cucumber (Gy14) v1cgywcgB063
ClCG02G020210Cucumber (Gy14) v1cgywcgB291
ClCG02G020210Cucumber (Gy14) v1cgywcgB306
ClCG02G020210Cucumber (Gy14) v1cgywcgB314
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB189
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB399
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB481
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB527
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB734
ClCG02G020210Cucurbita maxima (Rimu)cmawcgB758
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB180
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB211
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB397
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB479
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB525
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB738
ClCG02G020210Cucurbita moschata (Rifu)cmowcgB757
ClCG02G020210Wild cucumber (PI 183967)cpiwcgB034
ClCG02G020210Wild cucumber (PI 183967)cpiwcgB214
ClCG02G020210Wild cucumber (PI 183967)cpiwcgB304
ClCG02G020210Wild cucumber (PI 183967)cpiwcgB399
ClCG02G020210Cucumber (Chinese Long) v2cuwcgB293
ClCG02G020210Cucumber (Chinese Long) v2cuwcgB031
ClCG02G020210Cucumber (Chinese Long) v2cuwcgB212
ClCG02G020210Cucumber (Chinese Long) v2cuwcgB381
ClCG02G020210Cucumber (Chinese Long) v2cuwcgB382
ClCG02G020210Melon (DHL92) v3.5.1mewcgB021
ClCG02G020210Melon (DHL92) v3.5.1mewcgB057
ClCG02G020210Melon (DHL92) v3.5.1mewcgB147
ClCG02G020210Melon (DHL92) v3.5.1mewcgB327
ClCG02G020210Melon (DHL92) v3.5.1mewcgB521
ClCG02G020210Watermelon (97103) v1wcgwmB173
ClCG02G020210Watermelon (97103) v1wcgwmB175
ClCG02G020210Watermelon (97103) v1wcgwmB181
ClCG02G020210Watermelon (97103) v1wcgwmB187
ClCG02G020210Watermelon (97103) v1wcgwmB196
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB266
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB426
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB462
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB498
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB551
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB658
ClCG02G020210Cucurbita pepo (Zucchini)cpewcgB782
ClCG02G020210Bottle gourd (USVL1VR-Ls)lsiwcgB179
ClCG02G020210Bottle gourd (USVL1VR-Ls)lsiwcgB131
ClCG02G020210Bottle gourd (USVL1VR-Ls)lsiwcgB235
ClCG02G020210Bottle gourd (USVL1VR-Ls)lsiwcgB276
ClCG02G020210Cucumber (Gy14) v2cgybwcgB195
ClCG02G020210Cucumber (Gy14) v2cgybwcgB031
ClCG02G020210Cucumber (Gy14) v2cgybwcgB273
ClCG02G020210Cucumber (Gy14) v2cgybwcgB348
ClCG02G020210Cucumber (Gy14) v2cgybwcgB402
ClCG02G020210Melon (DHL92) v3.6.1medwcgB056