BLAST of ClCG02G018000 vs. Swiss-Prot
Match:
PP286_ARATH (Pentatricopeptide repeat-containing protein At3g58590 OS=Arabidopsis thaliana GN=At3g58590 PE=2 SV=2)
HSP 1 Score: 679.5 bits (1752), Expect = 4.1e-194
Identity = 349/722 (48.34%), Postives = 475/722 (65.79%), Query Frame = 1
Query: 5 GDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGML 64
GD+ H ++ LL VC KAP+F T+ LHAL+IT+ + Q ++V NN++ Y +G +
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV 65
Query: 65 LVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVD 124
+A +FD+MP RN VS+NT+I GYS+ G V +AW +F EMR G+ P Q T GLLS
Sbjct: 66 SLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA 125
Query: 125 LLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNS 184
LDV G QL GLS+K GLF + A VGT LL LYGR A QVFEDM KSL TWN
Sbjct: 126 SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 185 ILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIG 244
++SLLG F+ EC F EL+ G ++ SF+GVL S +DL + LH K G
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 245 FYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFY 304
E+ VVNSL++ Y +CG +A ++F++ D+V++N+II K P AL+LF
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 305 TMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFK 364
+M +G P Q ++V+ + S + G H ++ E+ + +G ALIDFYAK
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 365 KLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKT 424
LE++R CFD I +KN+V WNAL+ GY+ + L ++ML G+RP E+TFS +K+
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKS 425
Query: 425 LLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIV 484
+EL Q+H +++RMGYE+NDYV SSL SYAK+ L++D L + ++ SVV NIV
Sbjct: 426 CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 485 AAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDN 544
A Y+R G Y E+ KL+ LE PD +SWNI I AC++ D + +V+ELFK ML I PD
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDK 545
Query: 545 YTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFD 604
YTF+S+LS+C+KLC+L LGSS+HG++ KT C DTFVCN+LI MYGKCGSI +K+F+
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Query: 605 KVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKE 664
+ + +NLITWT +IS LG+HG+ EAL++ E LG KPD V+ ++LTAC+HGG+VKE
Sbjct: 606 ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKE 665
Query: 665 GMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGC 724
GM LF KMK YG+EPEMDHY+C VDLL+ +G++ EAE +I MPFP A +WRTFL+GC
Sbjct: 666 GMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 725
Query: 725 KR 727
R
Sbjct: 726 NR 726
BLAST of ClCG02G018000 vs. Swiss-Prot
Match:
PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 9.8e-87
Identity = 217/681 (31.86%), Postives = 338/681 (49.63%), Query Frame = 1
Query: 60 SIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGG 119
S L A NLFD+ P R+ SY +++ G+SR G +EA LFL + G E F
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 120 LLSVD--LLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSK 179
+L V L D G QL +K G F VGT+L+ Y + F + +VF++M +
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 158
Query: 180 SLVTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLH 239
++VTW +++S RN DE +F + EG +P+ F+F L + + G +H
Sbjct: 159 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 218
Query: 240 GIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPE 299
+V+K G + V NSL+N+YL+CG A LF++ V+ VVT+NS+IS
Sbjct: 219 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 278
Query: 300 TALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALI 359
AL +FY+M N + +++SF + +K C+ L + E H V+Y D + TAL+
Sbjct: 279 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 338
Query: 360 DFYAKFKKLEEARHCFDEIA-EKNLVSWNALILGY-SIDCYTSSMYLLIEMLHFGYRPNE 419
Y+K + +A F EI N+VSW A+I G+ D ++ L EM G RPNE
Sbjct: 339 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 398
Query: 420 FTFSAIMKTLLASELP-----QIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVS 479
FT+ +++ + LP ++H V++ YE + V ++L +Y K G +
Sbjct: 399 FTY-----SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV-------- 458
Query: 480 DSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLE 539
+E K+ ++ DI++W+ ++ A+ ++
Sbjct: 459 ------------------------EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 518
Query: 540 LFKCMLVLQIYPDNYTFISLLSVCAKL-CNLALGSSVHGVMIKT--GSGCCDTFVCNLLI 599
+F + I P+ +TF S+L+VCA ++ G HG IK+ S C V + L+
Sbjct: 519 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC---VSSALL 578
Query: 600 YMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGV 659
MY K G+IE A ++F + + ++L++W +IS HG A +AL EM+ +K DGV
Sbjct: 579 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 638
Query: 660 ALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIAS 719
V AC H GLV+EG + F M I P +H C+VDL S G + +A KVI +
Sbjct: 639 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 678
Query: 720 MPFPPSALLWRTFLEGCKRQK 729
MP P + +WRT L C+ K
Sbjct: 699 MPNPAGSTIWRTILAACRVHK 678
HSP 2 Score: 128.6 bits (322), Expect = 2.7e-28
Identity = 98/356 (27.53%), Postives = 173/356 (48.60%), Query Frame = 1
Query: 17 LLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPH 76
++++C+ + T LH + G + +Q + LM YS +L A LF E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLFKEIGC 360
Query: 77 -RNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVDLLDVWQGAQLQ 136
NVVS+ MISG+ + +EA DLF EM+ G P +FT+ +L+ L V +++
Sbjct: 361 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--LPVISPSEVH 420
Query: 137 GLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFV 196
VK + + VGT LL Y + G EA +VF + K +V W+++L+ +
Sbjct: 421 AQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 480
Query: 197 DECKVMFCELMCEGMEPSKFSFVGVLS-CFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNS 256
+ MF EL G++P++F+F +L+ C + + G+ HG IK + V ++
Sbjct: 481 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 540
Query: 257 LVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPT 316
L+ MY + G A ++F+ +D+V++NS+IS + + AL++F M +
Sbjct: 541 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 600
Query: 317 QASFVNAVKSCSCLGSSIYGEYFHSKAVR-YALESDVFVGTALIDFYAKFKKLEEA 370
+F+ +C+ G GE + VR + + ++D Y++ +LE+A
Sbjct: 601 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
HSP 3 Score: 50.8 bits (120), Expect = 7.2e-05
Identity = 38/146 (26.03%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 45 NQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLE 104
+ ++ V + L+ Y+ G + A +F +++VS+N+MISGY++ G +A D+F E
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 105 MRECGFEPTQFTFGGLLSVDLLD--VWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDG 164
M++ + TF G+ + V +G + + V++ + ++ LY R G
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 165 CFVEALQVFEDMCSKSLVT-WNSILS 188
+A++V E+M + + T W +IL+
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILA 672
BLAST of ClCG02G018000 vs. Swiss-Prot
Match:
PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)
HSP 1 Score: 312.4 bits (799), Expect = 1.3e-83
Identity = 201/707 (28.43%), Postives = 347/707 (49.08%), Query Frame = 1
Query: 27 FKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMI 86
+ +R + ++ +P + + N ++ YS + A + F+ MP R+VVS+N+M+
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 87 SGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVD--LLDVWQGAQLQGLSVKNGLF 146
SGY + G ++ ++F++M G E TF +L V L D G Q+ G+ V+ G
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD 212
Query: 147 YSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCE 206
+ + + LL +Y + FVE+L+VF+ + K+ V+W++I++ +N + F E
Sbjct: 213 -TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 272
Query: 207 LMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGG 266
+ S+ + VL + +L+ G LH +K F + +V + ++MY +C
Sbjct: 273 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 332
Query: 267 FLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKS 326
A LF+ + +YN++I+ ++ AL LF+ + ++GL + S ++
Sbjct: 333 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 392
Query: 327 CSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSW 386
C+ + G + A++ +L DV V A ID Y K + L EA FDE+ ++ VSW
Sbjct: 393 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 452
Query: 387 NALILGYSIDCYT-SSMYLLIEMLHFGYRPNEFTFSAIMKTLLASELP---QIHCLVIRM 446
NA+I + + +++L + ML P+EFTF +I+K L +IH +++
Sbjct: 453 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS 512
Query: 447 GYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRV---GLYDET 506
G N V SL Y+K G+I + I + ++ R G +E
Sbjct: 513 GMASNSSVGCSLIDMYSKCGMIEEA---------------EKIHSRFFQRANVSGTMEEL 572
Query: 507 QKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKL 566
+K+ +SWN +I + LF M+ + I PD +T+ ++L CA L
Sbjct: 573 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 632
Query: 567 CNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVV 626
+ LG +H +IK D ++C+ L+ MY KCG + + +F+K R+ +TW +
Sbjct: 633 ASAGLGKQIHAQVIKKELQS-DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAM 692
Query: 627 ISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYG 686
I HG EA++ M L +KP+ V ++L AC H GL+ +G+E F MK YG
Sbjct: 693 ICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYG 752
Query: 687 IEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGC 725
++P++ HY +VD+L G V A ++I MPF ++WRT L C
Sbjct: 753 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
HSP 2 Score: 46.2 bits (108), Expect = 1.8e-03
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 213 SKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLF 272
+ FSFV C +++ L+ G+ H +I GF V+N L+ +Y F+ A +F
Sbjct: 49 TNFSFV-FKEC-AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 108
Query: 273 EEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLI 313
+++P+RDVV++N +I+ +K N A F M ++
Sbjct: 109 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
BLAST of ClCG02G018000 vs. Swiss-Prot
Match:
PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 1.7e-83
Identity = 210/695 (30.22%), Postives = 344/695 (49.50%), Query Frame = 1
Query: 41 GPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWD 100
G P+ FV ++ Y +G L AR LF EM +VV++N MISG+ + G A +
Sbjct: 256 GHRPDHLAFV--TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 315
Query: 101 LFLEMRECGFEPTQFTFGGLLS----VDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLG 160
F MR+ + T+ T G +LS V LD+ G + ++K GL S VG++L+
Sbjct: 316 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLA-SNIYVGSSLVS 375
Query: 161 LYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFS 220
+Y + A +VFE + K+ V WN+++ N + +F ++ G F+
Sbjct: 376 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 435
Query: 221 FVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVP 280
F +LS + DL+ G H I+IK + V N+LV+MY +CG A ++FE +
Sbjct: 436 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 495
Query: 281 VRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEY 340
RD VT+N+II + A +LF M G++ A + +K+C+ + G+
Sbjct: 496 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 555
Query: 341 FHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCY 400
H +V+ L+ D+ G++LID Y+K +++AR F + E ++VS NALI GYS +
Sbjct: 556 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL 615
Query: 401 TSSMYLLIEMLHFGYRPNEFTFSAIMKTLLASEL----PQIHCLVIRMGY-EENDYVSSS 460
++ L EML G P+E TF+ I++ E Q H + + G+ E +Y+ S
Sbjct: 616 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 675
Query: 461 LASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIIS 520
L Y +++ A S+ + S+VL + + +++ G Y+E
Sbjct: 676 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE--------------- 735
Query: 521 WNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGSSVHGVMI 580
L+ +K M + PD TF+++L VC+ L +L G ++H ++
Sbjct: 736 ----------------ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 795
Query: 581 KTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGR-NLITWTVVISVLGLHGHAYEA 640
D N LI MY KCG ++ + ++FD+++ R N+++W +I+ +G+A +A
Sbjct: 796 HLAHD-LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 855
Query: 641 LKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVD 700
LK M + PD + VLTAC H G V +G ++F M +YGIE +DH C+VD
Sbjct: 856 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 913
Query: 701 LLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGCK 726
LL G++ EA+ I + P A LW + L C+
Sbjct: 916 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
HSP 2 Score: 162.9 bits (411), Expect = 1.3e-38
Identity = 140/565 (24.78%), Postives = 239/565 (42.30%), Query Frame = 1
Query: 150 VGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEG 209
+G ++ LY + A + F D K + WNS+LS+ + F L
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 210 MEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAH 269
+ P+KF+F VLS +R+ +++FG+ +H +IK+G +LV+MY +C
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC------- 216
Query: 270 KLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLG 329
+R A +F + + F VK+
Sbjct: 217 ------------------------DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 276
Query: 330 SSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALIL 389
+ + E + R D +I+ Y + KL++AR F E++ ++V+WN +I
Sbjct: 277 AVLVFERMRDEGHR----PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 336
Query: 390 GYSI-DCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTL-LASELPQ---IHCLVIRMGYEE 449
G+ C T ++ M + T +++ + + + L +H I++G
Sbjct: 337 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 396
Query: 450 NDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPL 509
N YV SSL S Y+K + + K+ L
Sbjct: 397 NIYVGSSLVSMYSKCEKM--------------------------------EAAAKVFEAL 456
Query: 510 EGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGS 569
E + + WN +I A KV+ELF M D++TF SLLS CA +L +GS
Sbjct: 457 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 516
Query: 570 SVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLH 629
H ++IK + FV N L+ MY KCG++E A ++F+++ R+ +TW +I
Sbjct: 517 QFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 576
Query: 630 GHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDH 689
+ EA M L G+ DG L + L AC H + +G ++ + VK G++ ++
Sbjct: 577 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHT 591
Query: 690 YQCVVDLLSSHGHVVEAEKVIASMP 710
++D+ S G + +A KV +S+P
Sbjct: 637 GSSLIDMYSKCGIIKDARKVFSSLP 591
HSP 3 Score: 98.2 bits (243), Expect = 3.9e-19
Identity = 54/198 (27.27%), Postives = 98/198 (49.49%), Query Frame = 1
Query: 230 LKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISM 289
L+ G+ +H + +G E + N++V++Y +C A K F+ + +DV +NS++SM
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 135
Query: 290 GTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESD 349
+ + +P L F ++ N + P + +F + +C+ + +G H ++ LE +
Sbjct: 136 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 195
Query: 350 VFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIE-MLH 409
+ G AL+D YAK ++ +AR F+ I + N V W L GY L+ E M
Sbjct: 196 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 255
Query: 410 FGYRPNEFTFSAIMKTLL 427
G+RP+ F ++ T +
Sbjct: 256 EGHRPDHLAFVTVINTYI 272
HSP 4 Score: 89.0 bits (219), Expect = 2.4e-16
Identity = 127/629 (20.19%), Postives = 243/629 (38.63%), Query Frame = 1
Query: 150 VGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEG 209
+G ++ LY + A + F D K + WNS+LS+ + F L
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 210 MEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAH 269
+ P+KF+F VLS +R+ +++FG+ +H +IK+G +LV+MY +C A
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 216
Query: 270 KLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLG 329
++FE + + V + + S K PE A+ +F M G P +FV + + LG
Sbjct: 217 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 276
Query: 330 S-----SIYGEYFHSKAVRYAL----ESDVFVGTALIDFYAKFKK--LEEARHCFDEIAE 389
++GE V + + T I+++ +K ++ R +
Sbjct: 277 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL- 336
Query: 390 KNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTLLASELPQIHCLVI 449
+A+ + ++D + + E + G N + S+++ E + V
Sbjct: 337 ------SAIGIVANLDL---GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 396
Query: 450 RMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQP--------SVVLSNIVAAYYNR 509
E+ND +++ YA +G V+ D + +LS A++
Sbjct: 397 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 456
Query: 510 VGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISL 569
+G + + L ++ N L++ AK ++F+ M DN T+ ++
Sbjct: 457 MGSQFHSIIIKKKL-AKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTI 516
Query: 570 LSVCAK---------------LC--------------------NLALGSSVHGVMIKTGS 629
+ + LC L G VH + +K G
Sbjct: 517 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 576
Query: 630 GCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLA 689
D + LI MY KCG I+ A K+F + ++++ +I+ + EA+
Sbjct: 577 D-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQ 636
Query: 690 EMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQ-CVVDLLSS 724
EM G+ P + ++ AC + G + ++ K G E ++ ++ + +
Sbjct: 637 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI-TKRGFSSEGEYLGISLLGMYMN 696
HSP 5 Score: 72.0 bits (175), Expect = 3.0e-11
Identity = 114/543 (20.99%), Postives = 218/543 (40.15%), Query Frame = 1
Query: 3 FNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIG 62
F I ++ +L C++ + R +H I MG N + L+ Y+
Sbjct: 152 FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS--YCGGALVDMYAKCD 211
Query: 63 MLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLS 122
+ AR +F+ + N V + + SGY + G +EA +F MR+ G P F +++
Sbjct: 212 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 271
Query: 123 VDLLDVWQGAQLQGLSVKNGLFYSGAIVG-TTLLGLYGRDGCFVEALQVFEDMCSKSL-- 182
+ + +L+ + G S +V ++ +G+ GC A++ F +M S+
Sbjct: 272 TYI----RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 331
Query: 183 --VTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLK-FGQLL 242
T S+LS +G +D V+ E + G+ + + ++S +S+ E ++ ++
Sbjct: 332 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 391
Query: 243 HGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRP 302
+ K ++ N+++ Y G +HK+ E + + S G ++
Sbjct: 392 EALEEKNDVFW-----NAMIRGYAHNGE---SHKVME--------LFMDMKSSGYNID-D 451
Query: 303 ETALELFYTMAANGLIPTQASFVNAVKSCSC-----LGSSIYGEYFHSKAVRYA------ 362
T L T AA+ + + F + + +G+++ Y A+ A
Sbjct: 452 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 511
Query: 363 -LESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLI 422
+ D +I Y + + EA F + +VS A C S++
Sbjct: 512 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA--------CLASTLKACT 571
Query: 423 EMLHFGYRPNEFTFSAIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISD 482
+H Y+ Q+HCL ++ G + + + SSL Y+K G+I D
Sbjct: 572 H-VHGLYQGK-----------------QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 631
Query: 483 VLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDET---QKLLCPLEGPDIISWNILIEACAK 525
V S + SVV N + A Y++ L + Q++L P I++ ++EAC K
Sbjct: 632 A-RKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 644
HSP 6 Score: 60.5 bits (145), Expect = 9.1e-08
Identity = 34/107 (31.78%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 17 LLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPH 76
+L+VCS + + R +H+L + ++ N L+ Y+ G + + +FDEM
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDE--LTSNTLIDMYAKCGDMKGSSQVFDEMRR 797
Query: 77 R-NVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLS 123
R NVVS+N++I+GY++ G+ ++A +F MR+ P + TF G+L+
Sbjct: 798 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
BLAST of ClCG02G018000 vs. Swiss-Prot
Match:
PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 5.0e-83
Identity = 219/743 (29.48%), Postives = 374/743 (50.34%), Query Frame = 1
Query: 8 IKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVA 67
I+ R LLQ+ + +H I G ++ N L+ YS G ++ A
Sbjct: 41 IRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGL--ELDTYLSNILINLYSRAGGMVYA 100
Query: 68 RNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEM-RECGFEPTQFTFGGLLS---- 127
R +F++MP RN+VS++TM+S + G +E+ +FLE R P ++ +
Sbjct: 101 RKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSG 160
Query: 128 VDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTW 187
+D W QLQ VK+G F VGT L+ Y +DG A VF+ + KS VTW
Sbjct: 161 LDGRGRWMVFQLQSFLVKSG-FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 220
Query: 188 NSILS---LLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGI 247
+++S +GR+ + +F +LM + + P + VLS S L+ G+ +H
Sbjct: 221 TTMISGCVKMGRSYVSLQ---LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 280
Query: 248 VIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNR-PET 307
+++ G + ++N L++ Y++CG + AHKLF +P ++++++ +++S G K N +
Sbjct: 281 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS-GYKQNALHKE 340
Query: 308 ALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALID 367
A+ELF +M+ GL P + + + SC+ L + +G H+ ++ L +D +V +LID
Sbjct: 341 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 400
Query: 368 FYAKFKKLEEARHCFDEIAEKNLVSWNALILGYS-----------IDCYTSSMYLLIEML 427
YAK L +AR FD A ++V +NA+I GYS ++ + + LI
Sbjct: 401 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI--- 460
Query: 428 HFGYRPNEFTFSAIMK---TLLASELP-QIHCLVIRMGYEENDYVSSSLASSYAKHGLIS 487
RP+ TF ++++ +L + L QIH L+ + G + + S+L Y+ +
Sbjct: 461 ----RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 520
Query: 488 DVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMD 547
D S +V +DE ++ D++ WN + +
Sbjct: 521 D----------------SRLV---------FDE-------MKVKDLVIWNSMFAGYVQQS 580
Query: 548 NYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVC 607
+ L LF + + + PD +TF ++++ L ++ LG H ++K G C + ++
Sbjct: 581 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC-NPYIT 640
Query: 608 NLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLK 667
N L+ MY KCGS E A K FD R+++ W VIS HG +AL+ L +M G++
Sbjct: 641 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 700
Query: 668 PDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEK 727
P+ + VL+AC H GLV++G++ F M +++GIEPE +HY C+V LL G + +A +
Sbjct: 701 PNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARE 735
BLAST of ClCG02G018000 vs. TrEMBL
Match:
A0A061FJ78_THECC (Pentatricopeptide repeat (PPR) superfamily protein, putative OS=Theobroma cacao GN=TCM_036298 PE=4 SV=1)
HSP 1 Score: 815.8 bits (2106), Expect = 4.1e-233
Identity = 410/730 (56.16%), Postives = 524/730 (71.78%), Query Frame = 1
Query: 1 MSFNGDII-KHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYS 60
MSFNGD + KH LL LL+ S P+ KTT+PLHAL IT+GP Q +FV+NN++ QY+
Sbjct: 1 MSFNGDFLFKHHERLLQLLKSWSAVPSLKTTKPLHALAITLGPYTCQPIFVYNNIISQYA 60
Query: 61 SIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGG 120
+ L AR +FD M RN VS+N+MIS Y + G V AWDLF MR CGF PT F G
Sbjct: 61 FLRHLSAARKVFDIMTERNPVSFNSMISAYGKCGDVWGAWDLFSMMRGCGFSPTPFALAG 120
Query: 121 LLSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSL 180
LLS LD+ G+QLQ L VKNGLF + A VGT LLGLY R GC EA+Q FEDM KSL
Sbjct: 121 LLSCQALDLCGGSQLQALVVKNGLFDADAFVGTALLGLYARSGCVSEAVQAFEDMPRKSL 180
Query: 181 VTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGI 240
VTWNSI+SL V++C + F EL+ S SFVGVLS + D +FG+ +HG+
Sbjct: 181 VTWNSIISLYAHYGLVEDCMLSFRELLRLEASLSDCSFVGVLSGLEGELDSEFGEQIHGL 240
Query: 241 VIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETA 300
VIK GF YEV VVNSL+NMY++C LA K+F+ + ++DVV++N+II + P A
Sbjct: 241 VIKSGFDYEVTVVNSLINMYVKCVRLCLAEKVFQGMHIKDVVSWNTIIGALERDGSPLKA 300
Query: 301 LELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDF 360
L+ F+ M+ +G++P Q + V + SCS L + G Y H+K ++ ESDVFVG+AL+DF
Sbjct: 301 LDFFFQMSMDGVMPNQTTLVIIIASCSSLQMPMLGAYIHAKTIKKGFESDVFVGSALVDF 360
Query: 361 YAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFS 420
YAK KL ++ CFD I EKN+VSWNALILGY+ T+ +LL++ML GYRPNEFTFS
Sbjct: 361 YAKCDKLVDSHQCFDGIYEKNVVSWNALILGYASKFCTTCSFLLLDMLQLGYRPNEFTFS 420
Query: 421 AIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVV 480
AI+K+ + EL Q+HC +IRMGYE N YV SSL +SYAK+GL+SD L +V+D + ++V
Sbjct: 421 AILKSSVTIELQQLHCFIIRMGYEHNVYVLSSLMTSYAKNGLLSDALPFVTDCERPLAIV 480
Query: 481 LSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQ 540
SNIVA YNRVG Y ET KLL LE PD++SWNI+I A A +Y +V ELF+ M + Q
Sbjct: 481 PSNIVAGIYNRVGQYQETLKLLSVLEEPDVVSWNIMIAASAHSGDYKEVFELFRHMQMTQ 540
Query: 541 IYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECA 600
IYPDNYTF+SLLSV +KL NLALGSSVHG++IKT CDTFVCN+L+ MYG+CG I+ +
Sbjct: 541 IYPDNYTFVSLLSVSSKLSNLALGSSVHGLIIKTDFSLCDTFVCNVLVNMYGECGCIKSS 600
Query: 601 LKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHG 660
+K+FD + RNLITWT +IS LG++G+++EAL+ EME LG KPDGVA A+LT C+H
Sbjct: 601 VKIFDGMADRNLITWTSLISALGVNGYSHEALENFQEMEFLGFKPDGVAFIAILTVCRHA 660
Query: 661 GLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRT 720
GLVKEGMELF +MK YG+EP+MDHY C+VDLL+ HG + EAE++IA M FPP AL+WR+
Sbjct: 661 GLVKEGMELFRRMKCDYGLEPKMDHYHCMVDLLARHGKLKEAEQIIAGMAFPPDALIWRS 720
Query: 721 FLEGCKRQKT 730
FLEGCKR T
Sbjct: 721 FLEGCKRHIT 730
BLAST of ClCG02G018000 vs. TrEMBL
Match:
V4U7B0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014349mg PE=4 SV=1)
HSP 1 Score: 799.7 bits (2064), Expect = 3.0e-228
Identity = 397/689 (57.62%), Postives = 518/689 (75.18%), Query Frame = 1
Query: 40 MGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAW 99
M P P+Q +F++N+++ Y+S+G + AR LFD+MP RNVVS+N++IS YSR G+V++A
Sbjct: 75 MSPNPDQPIFLYNSIISLYASLGEPVTARKLFDKMPDRNVVSFNSIISAYSRCGYVEDAL 134
Query: 100 DLFLEMRECGFEPTQFTFGGLLSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYG 159
+FL M GFEPTQFTFGGLLS D L+ +GAQLQ +KNGLF + A VGT LLGLYG
Sbjct: 135 RMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG 194
Query: 160 RDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVG 219
R GC E + VFEDM KSLVTWNSI+S+ G++ FV++C +F EL+ + ++ SFVG
Sbjct: 195 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFRELVRSEVALTESSFVG 254
Query: 220 VLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRD 279
V+ S ++DL+FG+ +HG+VIK GF YE+LV NSLVNMY QC G A K+F++V +RD
Sbjct: 255 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGICSAEKMFKDVAIRD 314
Query: 280 VVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHS 339
VV++N+II + ALEL+ M+ + + P Q +FV + SC+ L +SI G+ H+
Sbjct: 315 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 374
Query: 340 KAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSS 399
K ++ ALE DVFVG+AL+DFYAK LE A CF EI+ KN+VSWNALILGY+ +S
Sbjct: 375 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYARKSSPTS 434
Query: 400 MYLLIEMLHFGYRPNEFTFSAIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKH 459
++LLIE+L GYRPNEFTFS ++++ LA +L Q+HCL+IRMGYE +YV SL +SYAK
Sbjct: 435 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 494
Query: 460 GLISDVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEAC 519
GLISD LA+V+ N +VV +NI+A YNR G Y+ET KLL LE PDI+SWNI+I AC
Sbjct: 495 GLISDALAFVTALNIPRAVVPTNIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 554
Query: 520 AKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCD 579
A +Y +VLELFK M +IYPDNYTF+SLLS C+KLCNLALGSS+HG++ KT D
Sbjct: 555 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISLD 614
Query: 580 TFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMEL 639
TFVCN+LI MYGKCGSI ++K+F+++ RN+ITWT +IS LGL+G A AL++ EME
Sbjct: 615 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 674
Query: 640 LGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVV 699
LG KPD VAL AVLTAC+HGGLV+EGMELF +M YG+EPEMDHY CVVDLL +GH+
Sbjct: 675 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 734
Query: 700 EAEKVIASMPFPPSALLWRTFLEGCKRQK 729
EAEK+I +MPFPP+AL+WRTFLEGC+R++
Sbjct: 735 EAEKIITTMPFPPNALIWRTFLEGCQRRR 763
BLAST of ClCG02G018000 vs. TrEMBL
Match:
B9IQQ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12080g PE=4 SV=2)
HSP 1 Score: 786.6 bits (2030), Expect = 2.7e-224
Identity = 397/724 (54.83%), Postives = 522/724 (72.10%), Query Frame = 1
Query: 5 GDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGML 64
G+ +K+++ LL LLQ CSK TT+PLHALTIT+GP P Q+ FV+NN++ Y+S +
Sbjct: 6 GNFLKYQYRLLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQV 65
Query: 65 LVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVD 124
+A +FD MPHRN VSYN++IS +S+ G+++EAW F EM +CGF P FT GLLS
Sbjct: 66 PMAHKVFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLSCA 125
Query: 125 LLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNS 184
+DV +G LQ L++KNGLF S VGT LLGL+GR G EA VFEDM KSLVTWNS
Sbjct: 126 SMDVGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNS 185
Query: 185 ILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIG 244
++SLLG + FV++C V+F +L+ + SK SF GVLS +EDL+FG +HG+VIK G
Sbjct: 186 MISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSG 245
Query: 245 FYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFY 304
EVLV NSL+NMY + KLFEEV RDVVT+N+IIS +K P ALE+F
Sbjct: 246 LDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFL 305
Query: 305 TMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFK 364
M+ +G++P Q +FV+ + SC+ L + GEY H K V+ ALE+DV++G+AL+D+YAK
Sbjct: 306 KMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCG 365
Query: 365 KLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKT 424
KL+ A +CF EI +KN+VSWN+LILGY+ C +S+ LL+EML G+RPNEF+FSA++K+
Sbjct: 366 KLDNAHYCFREIHQKNVVSWNSLILGYANKCSFASVSLLLEMLKLGFRPNEFSFSAVLKS 425
Query: 425 LLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIV 484
L EL QIH L IR+GYE N+YV +SL +SY ++GLI+D L +V S +VV +N +
Sbjct: 426 SLVLELKQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASETLLAVVPANSI 485
Query: 485 AAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDN 544
A YNR G Y ET K L LE PD +SWNI+I ACA+ NY +V ELFK M V Q+ PDN
Sbjct: 486 AGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDN 545
Query: 545 YTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFD 604
YT+ SLL V +K+CNLALGSS+HG++IKT D V N+LI MYGKCG++E + K+FD
Sbjct: 546 YTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFD 605
Query: 605 KVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKE 664
+ RNLITWT +IS LG++G A EAL+R +ME LG +PD VA AVLTAC+HG LV+E
Sbjct: 606 SMTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVRE 665
Query: 665 GMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGC 724
GM+LF KM Y IEP+MDHY C+VDLL+ +GH+ EAEKVI+ MPFPP A +WR+FLEGC
Sbjct: 666 GMQLFGKMN-NYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGC 725
Query: 725 KRQK 729
K+++
Sbjct: 726 KKRR 728
BLAST of ClCG02G018000 vs. TrEMBL
Match:
B9SGL5_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0553930 PE=4 SV=1)
HSP 1 Score: 780.0 bits (2013), Expect = 2.5e-222
Identity = 385/730 (52.74%), Postives = 528/730 (72.33%), Query Frame = 1
Query: 1 MSFNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSS 60
M+F+GD IK+ LL+LL C++A + TT+PLHALTIT+GP PNQ ++ NN++ Y+S
Sbjct: 1 MTFHGDFIKNHDRLLYLLHACTRARSLATTKPLHALTITLGPNPNQPAYLFNNIISLYTS 60
Query: 61 IGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGL 120
L +AR +FD MP R++ SYN++I+ Y + G+++EA +F MR+CGF P FT GL
Sbjct: 61 FSELSLARKVFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGL 120
Query: 121 LSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLV 180
LS +D+ G QLQ L++KNGLFY A VGT LL ++GR G EAL VFED+ KSLV
Sbjct: 121 LSCSKMDLSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLV 180
Query: 181 TWNSILSLLGRNQFVDECKVMFCELMCE-GMEPSKFSFVGVLSCFSRKEDLKFGQLLHGI 240
TWNSI+ L G++ +V++C + FCEL E G S+ SFVGVLS + L+FG+ +H +
Sbjct: 181 TWNSIICLFGQHGYVEDCIIYFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSL 240
Query: 241 VIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETA 300
V K GF Y V VVNS++++Y++C LA K FEE +D+VT+N++I K +P A
Sbjct: 241 VTKTGFDYTVSVVNSVISVYVKCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKPIKA 300
Query: 301 LELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDF 360
LELF+ M + + P Q +F + + SC+ L +Y E+ H+K + +A ++DV+VG+AL+D+
Sbjct: 301 LELFFKMPRDAIRPNQITFASLISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDY 360
Query: 361 YAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFS 420
YAK KL++AR CF +I EKN+VSWN+LILG + C +++ LL+EML GY+PNEF+FS
Sbjct: 361 YAKCDKLDDARCCFVKIHEKNVVSWNSLILGCANKCPYAAISLLVEMLQCGYQPNEFSFS 420
Query: 421 AIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVV 480
A++ + EL Q+HCL+IRMGY+ NDYV SSL +SY ++GLISD L +++ S + V
Sbjct: 421 AVLISSSILELQQLHCLIIRMGYDNNDYVLSSLITSYGRNGLISDALVFLAASETPLAAV 480
Query: 481 LSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQ 540
SN VA YN+ G Y +T +LL LE PD +SWNI I ACA+ NY +V ELFK MLV Q
Sbjct: 481 PSNNVAGIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQ 540
Query: 541 IYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECA 600
I+PDNYT++SLLS +++C+LALGSS+HG +IK CDTFVCN+L+ MYGKCG + +
Sbjct: 541 IHPDNYTYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSS 600
Query: 601 LKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHG 660
+K+F+ ++ RNLITWT +IS LG++ A+EAL+R +ME GL+PD VA AVLTAC+HG
Sbjct: 601 VKIFNSMRDRNLITWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHG 660
Query: 661 GLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRT 720
LV EG+ELF KMK YG+EPEMDHY C+VDL S HGHV EAEKVI+SMP PP+AL+WRT
Sbjct: 661 ALVGEGIELFKKMK-SYGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRT 720
Query: 721 FLEGCKRQKT 730
FLEGCK+ ++
Sbjct: 721 FLEGCKKYRS 729
BLAST of ClCG02G018000 vs. TrEMBL
Match:
A0A0D2VWJ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G071200 PE=4 SV=1)
HSP 1 Score: 778.9 bits (2010), Expect = 5.6e-222
Identity = 390/724 (53.87%), Postives = 513/724 (70.86%), Query Frame = 1
Query: 6 DIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLL 65
D +K +H LL LL+ S P+ +T+ LHAL IT GP +Q +F+ NN++ Y+S+G L
Sbjct: 5 DFLKTQHRLLQLLKSSSAFPSLISTQSLHALAITFGPYASQPIFLFNNIISLYASLGHLP 64
Query: 66 VARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVDL 125
VAR +FD M +RN VS+++MI+ Y + G + A +LF MR GF PT + GLLS
Sbjct: 65 VARKVFDNMTNRNTVSFSSMITAYGKSGDLWAACELFSSMRSYGFLPTPYVLAGLLSSQA 124
Query: 126 LDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSI 185
L + G QLQ L VKNGLF++ + VGT LLGLYGR GC EALQ F+ M KSLVTWNSI
Sbjct: 125 LSLSGGVQLQALVVKNGLFFADSFVGTALLGLYGRYGCVSEALQAFDHMPRKSLVTWNSI 184
Query: 186 LSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGF 245
+SL + V +C ++F EL S SFVGVLS + DL+FG+ +HG+VIK GF
Sbjct: 185 ISLCAHHGLVKDCMLLFRELQRVEASLSDSSFVGVLSGLKGELDLEFGEQIHGLVIKCGF 244
Query: 246 YYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYT 305
+EV V NSL+N Y++C LA K+FE + + DVV++N+II K P+ AL F+
Sbjct: 245 DHEVTVTNSLINAYVKCAQICLAEKVFEGMRITDVVSWNTIIGALEKDEHPQKALGFFFQ 304
Query: 306 MAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKK 365
M+ G++P +FV + SCS L + GEY H+K ++ +SDV VG+AL+DFY K K
Sbjct: 305 MSWEGMMPNHTTFVIIIASCSNLRIPMLGEYIHAKTIKKGFQSDVVVGSALVDFYVKCDK 364
Query: 366 LEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTL 425
L+++ CFD I EKN+VSWNALILGY+ +++ LL++MLH GYRPNEFTFSAI+K+
Sbjct: 365 LQDSHRCFDGIREKNVVSWNALILGYASKFSSTAASLLLDMLHQGYRPNEFTFSAILKSS 424
Query: 426 LASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVA 485
EL Q+HCL+IRMG+E+N YV SSL +SYAK+G +SD L +++D + PS V SNI A
Sbjct: 425 ATIELKQLHCLIIRMGHEDNIYVLSSLMTSYAKNGFLSDALTFITDFGRPPSTVPSNIAA 484
Query: 486 AYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNY 545
Y RVG Y ET +LL LE PDI+SWNI+I ACA+ +Y +V ELFK M ++QIYPDNY
Sbjct: 485 GIYYRVGQYHETIRLLSILEDPDIVSWNIVIAACARTGHYKEVFELFKHMQMIQIYPDNY 544
Query: 546 TFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDK 605
TF+SLLSVC KLCNLALGSSVHG++IKT CD+FVCNLLI MYGKCG I+ A+K+F
Sbjct: 545 TFVSLLSVCNKLCNLALGSSVHGLIIKTDYSLCDSFVCNLLIDMYGKCGCIKSAVKIFGG 604
Query: 606 VKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEG 665
+ +NLITWT +IS LG+HG+ +EAL+ EME G KPDGV+L A+LT C+H GLV+EG
Sbjct: 605 MVDKNLITWTSLISALGVHGYYHEALETFREMEFHGFKPDGVSLIAILTVCRHAGLVEEG 664
Query: 666 MELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGCK 725
ME F +++ YG EP+M+HY CVVDLL+ +G + EAE++IASMPFPP A++WR FLEG K
Sbjct: 665 MEFFRRVESDYGFEPKMEHYYCVVDLLARYGKLGEAEQIIASMPFPPDAIIWRNFLEGLK 724
Query: 726 RQKT 730
R T
Sbjct: 725 RHTT 728
BLAST of ClCG02G018000 vs. TAIR10
Match:
AT3G58590.1 (AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 679.5 bits (1752), Expect = 2.3e-195
Identity = 349/722 (48.34%), Postives = 475/722 (65.79%), Query Frame = 1
Query: 5 GDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGML 64
GD+ H ++ LL VC KAP+F T+ LHAL+IT+ + Q ++V NN++ Y +G +
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV 65
Query: 65 LVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVD 124
+A +FD+MP RN VS+NT+I GYS+ G V +AW +F EMR G+ P Q T GLLS
Sbjct: 66 SLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA 125
Query: 125 LLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNS 184
LDV G QL GLS+K GLF + A VGT LL LYGR A QVFEDM KSL TWN
Sbjct: 126 SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 185 ILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIG 244
++SLLG F+ EC F EL+ G ++ SF+GVL S +DL + LH K G
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 245 FYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFY 304
E+ VVNSL++ Y +CG +A ++F++ D+V++N+II K P AL+LF
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 305 TMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFK 364
+M +G P Q ++V+ + S + G H ++ E+ + +G ALIDFYAK
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 365 KLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKT 424
LE++R CFD I +KN+V WNAL+ GY+ + L ++ML G+RP E+TFS +K+
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKS 425
Query: 425 LLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIV 484
+EL Q+H +++RMGYE+NDYV SSL SYAK+ L++D L + ++ SVV NIV
Sbjct: 426 CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 485 AAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDN 544
A Y+R G Y E+ KL+ LE PD +SWNI I AC++ D + +V+ELFK ML I PD
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDK 545
Query: 545 YTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFD 604
YTF+S+LS+C+KLC+L LGSS+HG++ KT C DTFVCN+LI MYGKCGSI +K+F+
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Query: 605 KVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKE 664
+ + +NLITWT +IS LG+HG+ EAL++ E LG KPD V+ ++LTAC+HGG+VKE
Sbjct: 606 ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKE 665
Query: 665 GMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGC 724
GM LF KMK YG+EPEMDHY+C VDLL+ +G++ EAE +I MPFP A +WRTFL+GC
Sbjct: 666 GMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 725
Query: 725 KR 727
R
Sbjct: 726 NR 726
BLAST of ClCG02G018000 vs. TAIR10
Match:
AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 322.8 bits (826), Expect = 5.5e-88
Identity = 217/681 (31.86%), Postives = 338/681 (49.63%), Query Frame = 1
Query: 60 SIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGG 119
S L A NLFD+ P R+ SY +++ G+SR G +EA LFL + G E F
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 120 LLSVD--LLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSK 179
+L V L D G QL +K G F VGT+L+ Y + F + +VF++M +
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 158
Query: 180 SLVTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLH 239
++VTW +++S RN DE +F + EG +P+ F+F L + + G +H
Sbjct: 159 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 218
Query: 240 GIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPE 299
+V+K G + V NSL+N+YL+CG A LF++ V+ VVT+NS+IS
Sbjct: 219 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 278
Query: 300 TALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALI 359
AL +FY+M N + +++SF + +K C+ L + E H V+Y D + TAL+
Sbjct: 279 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 338
Query: 360 DFYAKFKKLEEARHCFDEIA-EKNLVSWNALILGY-SIDCYTSSMYLLIEMLHFGYRPNE 419
Y+K + +A F EI N+VSW A+I G+ D ++ L EM G RPNE
Sbjct: 339 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 398
Query: 420 FTFSAIMKTLLASELP-----QIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVS 479
FT+ +++ + LP ++H V++ YE + V ++L +Y K G +
Sbjct: 399 FTY-----SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV-------- 458
Query: 480 DSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLE 539
+E K+ ++ DI++W+ ++ A+ ++
Sbjct: 459 ------------------------EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 518
Query: 540 LFKCMLVLQIYPDNYTFISLLSVCAKL-CNLALGSSVHGVMIKT--GSGCCDTFVCNLLI 599
+F + I P+ +TF S+L+VCA ++ G HG IK+ S C V + L+
Sbjct: 519 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC---VSSALL 578
Query: 600 YMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGV 659
MY K G+IE A ++F + + ++L++W +IS HG A +AL EM+ +K DGV
Sbjct: 579 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 638
Query: 660 ALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIAS 719
V AC H GLV+EG + F M I P +H C+VDL S G + +A KVI +
Sbjct: 639 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 678
Query: 720 MPFPPSALLWRTFLEGCKRQK 729
MP P + +WRT L C+ K
Sbjct: 699 MPNPAGSTIWRTILAACRVHK 678
HSP 2 Score: 128.6 bits (322), Expect = 1.5e-29
Identity = 98/356 (27.53%), Postives = 173/356 (48.60%), Query Frame = 1
Query: 17 LLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPH 76
++++C+ + T LH + G + +Q + LM YS +L A LF E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLFKEIGC 360
Query: 77 -RNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVDLLDVWQGAQLQ 136
NVVS+ MISG+ + +EA DLF EM+ G P +FT+ +L+ L V +++
Sbjct: 361 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--LPVISPSEVH 420
Query: 137 GLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFV 196
VK + + VGT LL Y + G EA +VF + K +V W+++L+ +
Sbjct: 421 AQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 480
Query: 197 DECKVMFCELMCEGMEPSKFSFVGVLS-CFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNS 256
+ MF EL G++P++F+F +L+ C + + G+ HG IK + V ++
Sbjct: 481 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 540
Query: 257 LVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPT 316
L+ MY + G A ++F+ +D+V++NS+IS + + AL++F M +
Sbjct: 541 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 600
Query: 317 QASFVNAVKSCSCLGSSIYGEYFHSKAVR-YALESDVFVGTALIDFYAKFKKLEEA 370
+F+ +C+ G GE + VR + + ++D Y++ +LE+A
Sbjct: 601 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
HSP 3 Score: 50.8 bits (120), Expect = 4.0e-06
Identity = 38/146 (26.03%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 45 NQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLE 104
+ ++ V + L+ Y+ G + A +F +++VS+N+MISGY++ G +A D+F E
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 105 MRECGFEPTQFTFGGLLSVDLLD--VWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDG 164
M++ + TF G+ + V +G + + V++ + ++ LY R G
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 165 CFVEALQVFEDMCSKSLVT-WNSILS 188
+A++V E+M + + T W +IL+
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILA 672
BLAST of ClCG02G018000 vs. TAIR10
Match:
AT3G02330.1 (AT3G02330.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 312.4 bits (799), Expect = 7.5e-85
Identity = 201/707 (28.43%), Postives = 347/707 (49.08%), Query Frame = 1
Query: 27 FKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMI 86
+ +R + ++ +P + + N ++ YS + A + F+ MP R+VVS+N+M+
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 87 SGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVD--LLDVWQGAQLQGLSVKNGLF 146
SGY + G ++ ++F++M G E TF +L V L D G Q+ G+ V+ G
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD 212
Query: 147 YSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCE 206
+ + + LL +Y + FVE+L+VF+ + K+ V+W++I++ +N + F E
Sbjct: 213 -TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 272
Query: 207 LMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGG 266
+ S+ + VL + +L+ G LH +K F + +V + ++MY +C
Sbjct: 273 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 332
Query: 267 FLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKS 326
A LF+ + +YN++I+ ++ AL LF+ + ++GL + S ++
Sbjct: 333 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 392
Query: 327 CSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSW 386
C+ + G + A++ +L DV V A ID Y K + L EA FDE+ ++ VSW
Sbjct: 393 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 452
Query: 387 NALILGYSIDCYT-SSMYLLIEMLHFGYRPNEFTFSAIMKTLLASELP---QIHCLVIRM 446
NA+I + + +++L + ML P+EFTF +I+K L +IH +++
Sbjct: 453 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS 512
Query: 447 GYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRV---GLYDET 506
G N V SL Y+K G+I + I + ++ R G +E
Sbjct: 513 GMASNSSVGCSLIDMYSKCGMIEEA---------------EKIHSRFFQRANVSGTMEEL 572
Query: 507 QKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKL 566
+K+ +SWN +I + LF M+ + I PD +T+ ++L CA L
Sbjct: 573 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 632
Query: 567 CNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVV 626
+ LG +H +IK D ++C+ L+ MY KCG + + +F+K R+ +TW +
Sbjct: 633 ASAGLGKQIHAQVIKKELQS-DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAM 692
Query: 627 ISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYG 686
I HG EA++ M L +KP+ V ++L AC H GL+ +G+E F MK YG
Sbjct: 693 ICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYG 752
Query: 687 IEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGC 725
++P++ HY +VD+L G V A ++I MPF ++WRT L C
Sbjct: 753 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
HSP 2 Score: 46.2 bits (108), Expect = 1.0e-04
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 213 SKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLF 272
+ FSFV C +++ L+ G+ H +I GF V+N L+ +Y F+ A +F
Sbjct: 49 TNFSFV-FKEC-AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 108
Query: 273 EEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLI 313
+++P+RDVV++N +I+ +K N A F M ++
Sbjct: 109 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
BLAST of ClCG02G018000 vs. TAIR10
Match:
AT3G09040.1 (AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 312.0 bits (798), Expect = 9.7e-85
Identity = 210/695 (30.22%), Postives = 344/695 (49.50%), Query Frame = 1
Query: 41 GPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWD 100
G P+ FV ++ Y +G L AR LF EM +VV++N MISG+ + G A +
Sbjct: 256 GHRPDHLAFV--TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 315
Query: 101 LFLEMRECGFEPTQFTFGGLLS----VDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLG 160
F MR+ + T+ T G +LS V LD+ G + ++K GL S VG++L+
Sbjct: 316 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLA-SNIYVGSSLVS 375
Query: 161 LYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFS 220
+Y + A +VFE + K+ V WN+++ N + +F ++ G F+
Sbjct: 376 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 435
Query: 221 FVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVP 280
F +LS + DL+ G H I+IK + V N+LV+MY +CG A ++FE +
Sbjct: 436 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 495
Query: 281 VRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEY 340
RD VT+N+II + A +LF M G++ A + +K+C+ + G+
Sbjct: 496 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 555
Query: 341 FHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCY 400
H +V+ L+ D+ G++LID Y+K +++AR F + E ++VS NALI GYS +
Sbjct: 556 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL 615
Query: 401 TSSMYLLIEMLHFGYRPNEFTFSAIMKTLLASEL----PQIHCLVIRMGY-EENDYVSSS 460
++ L EML G P+E TF+ I++ E Q H + + G+ E +Y+ S
Sbjct: 616 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 675
Query: 461 LASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIIS 520
L Y +++ A S+ + S+VL + + +++ G Y+E
Sbjct: 676 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE--------------- 735
Query: 521 WNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGSSVHGVMI 580
L+ +K M + PD TF+++L VC+ L +L G ++H ++
Sbjct: 736 ----------------ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 795
Query: 581 KTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGR-NLITWTVVISVLGLHGHAYEA 640
D N LI MY KCG ++ + ++FD+++ R N+++W +I+ +G+A +A
Sbjct: 796 HLAHD-LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 855
Query: 641 LKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVD 700
LK M + PD + VLTAC H G V +G ++F M +YGIE +DH C+VD
Sbjct: 856 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 913
Query: 701 LLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGCK 726
LL G++ EA+ I + P A LW + L C+
Sbjct: 916 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
HSP 2 Score: 162.9 bits (411), Expect = 7.3e-40
Identity = 140/565 (24.78%), Postives = 239/565 (42.30%), Query Frame = 1
Query: 150 VGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEG 209
+G ++ LY + A + F D K + WNS+LS+ + F L
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 210 MEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAH 269
+ P+KF+F VLS +R+ +++FG+ +H +IK+G +LV+MY +C
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC------- 216
Query: 270 KLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLG 329
+R A +F + + F VK+
Sbjct: 217 ------------------------DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 276
Query: 330 SSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALIL 389
+ + E + R D +I+ Y + KL++AR F E++ ++V+WN +I
Sbjct: 277 AVLVFERMRDEGHR----PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 336
Query: 390 GYSI-DCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTL-LASELPQ---IHCLVIRMGYEE 449
G+ C T ++ M + T +++ + + + L +H I++G
Sbjct: 337 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 396
Query: 450 NDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPL 509
N YV SSL S Y+K + + K+ L
Sbjct: 397 NIYVGSSLVSMYSKCEKM--------------------------------EAAAKVFEAL 456
Query: 510 EGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGS 569
E + + WN +I A KV+ELF M D++TF SLLS CA +L +GS
Sbjct: 457 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 516
Query: 570 SVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLH 629
H ++IK + FV N L+ MY KCG++E A ++F+++ R+ +TW +I
Sbjct: 517 QFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 576
Query: 630 GHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDH 689
+ EA M L G+ DG L + L AC H + +G ++ + VK G++ ++
Sbjct: 577 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHT 591
Query: 690 YQCVVDLLSSHGHVVEAEKVIASMP 710
++D+ S G + +A KV +S+P
Sbjct: 637 GSSLIDMYSKCGIIKDARKVFSSLP 591
HSP 3 Score: 98.2 bits (243), Expect = 2.2e-20
Identity = 54/198 (27.27%), Postives = 98/198 (49.49%), Query Frame = 1
Query: 230 LKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISM 289
L+ G+ +H + +G E + N++V++Y +C A K F+ + +DV +NS++SM
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 135
Query: 290 GTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESD 349
+ + +P L F ++ N + P + +F + +C+ + +G H ++ LE +
Sbjct: 136 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 195
Query: 350 VFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIE-MLH 409
+ G AL+D YAK ++ +AR F+ I + N V W L GY L+ E M
Sbjct: 196 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 255
Query: 410 FGYRPNEFTFSAIMKTLL 427
G+RP+ F ++ T +
Sbjct: 256 EGHRPDHLAFVTVINTYI 272
HSP 4 Score: 89.0 bits (219), Expect = 1.3e-17
Identity = 127/629 (20.19%), Postives = 243/629 (38.63%), Query Frame = 1
Query: 150 VGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSILSLLGRNQFVDECKVMFCELMCEG 209
+G ++ LY + A + F D K + WNS+LS+ + F L
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 210 MEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAH 269
+ P+KF+F VLS +R+ +++FG+ +H +IK+G +LV+MY +C A
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 216
Query: 270 KLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTMAANGLIPTQASFVNAVKSCSCLG 329
++FE + + V + + S K PE A+ +F M G P +FV + + LG
Sbjct: 217 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 276
Query: 330 S-----SIYGEYFHSKAVRYAL----ESDVFVGTALIDFYAKFKK--LEEARHCFDEIAE 389
++GE V + + T I+++ +K ++ R +
Sbjct: 277 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL- 336
Query: 390 KNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTLLASELPQIHCLVI 449
+A+ + ++D + + E + G N + S+++ E + V
Sbjct: 337 ------SAIGIVANLDL---GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 396
Query: 450 RMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQP--------SVVLSNIVAAYYNR 509
E+ND +++ YA +G V+ D + +LS A++
Sbjct: 397 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 456
Query: 510 VGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYTFISL 569
+G + + L ++ N L++ AK ++F+ M DN T+ ++
Sbjct: 457 MGSQFHSIIIKKKL-AKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTI 516
Query: 570 LSVCAK---------------LC--------------------NLALGSSVHGVMIKTGS 629
+ + LC L G VH + +K G
Sbjct: 517 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 576
Query: 630 GCCDTFVCNLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLA 689
D + LI MY KCG I+ A K+F + ++++ +I+ + EA+
Sbjct: 577 D-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQ 636
Query: 690 EMELLGLKPDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQ-CVVDLLSS 724
EM G+ P + ++ AC + G + ++ K G E ++ ++ + +
Sbjct: 637 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI-TKRGFSSEGEYLGISLLGMYMN 696
HSP 5 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 114/543 (20.99%), Postives = 218/543 (40.15%), Query Frame = 1
Query: 3 FNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIG 62
F I ++ +L C++ + R +H I MG N + L+ Y+
Sbjct: 152 FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS--YCGGALVDMYAKCD 211
Query: 63 MLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLS 122
+ AR +F+ + N V + + SGY + G +EA +F MR+ G P F +++
Sbjct: 212 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 271
Query: 123 VDLLDVWQGAQLQGLSVKNGLFYSGAIVG-TTLLGLYGRDGCFVEALQVFEDMCSKSL-- 182
+ + +L+ + G S +V ++ +G+ GC A++ F +M S+
Sbjct: 272 TYI----RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 331
Query: 183 --VTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLK-FGQLL 242
T S+LS +G +D V+ E + G+ + + ++S +S+ E ++ ++
Sbjct: 332 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 391
Query: 243 HGIVIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRP 302
+ K ++ N+++ Y G +HK+ E + + S G ++
Sbjct: 392 EALEEKNDVFW-----NAMIRGYAHNGE---SHKVME--------LFMDMKSSGYNID-D 451
Query: 303 ETALELFYTMAANGLIPTQASFVNAVKSCSC-----LGSSIYGEYFHSKAVRYA------ 362
T L T AA+ + + F + + +G+++ Y A+ A
Sbjct: 452 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 511
Query: 363 -LESDVFVGTALIDFYAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLI 422
+ D +I Y + + EA F + +VS A C S++
Sbjct: 512 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA--------CLASTLKACT 571
Query: 423 EMLHFGYRPNEFTFSAIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISD 482
+H Y+ Q+HCL ++ G + + + SSL Y+K G+I D
Sbjct: 572 H-VHGLYQGK-----------------QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 631
Query: 483 VLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDET---QKLLCPLEGPDIISWNILIEACAK 525
V S + SVV N + A Y++ L + Q++L P I++ ++EAC K
Sbjct: 632 A-RKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 644
HSP 6 Score: 60.5 bits (145), Expect = 5.1e-09
Identity = 34/107 (31.78%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 17 LLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVARNLFDEMPH 76
+L+VCS + + R +H+L + ++ N L+ Y+ G + + +FDEM
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDE--LTSNTLIDMYAKCGDMKGSSQVFDEMRR 797
Query: 77 R-NVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLS 123
R NVVS+N++I+GY++ G+ ++A +F MR+ P + TF G+L+
Sbjct: 798 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
BLAST of ClCG02G018000 vs. TAIR10
Match:
AT4G39530.1 (AT4G39530.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 310.5 bits (794), Expect = 2.8e-84
Identity = 219/743 (29.48%), Postives = 374/743 (50.34%), Query Frame = 1
Query: 8 IKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLVA 67
I+ R LLQ+ + +H I G ++ N L+ YS G ++ A
Sbjct: 41 IRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGL--ELDTYLSNILINLYSRAGGMVYA 100
Query: 68 RNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEM-RECGFEPTQFTFGGLLS---- 127
R +F++MP RN+VS++TM+S + G +E+ +FLE R P ++ +
Sbjct: 101 RKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSG 160
Query: 128 VDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTW 187
+D W QLQ VK+G F VGT L+ Y +DG A VF+ + KS VTW
Sbjct: 161 LDGRGRWMVFQLQSFLVKSG-FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 220
Query: 188 NSILS---LLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGI 247
+++S +GR+ + +F +LM + + P + VLS S L+ G+ +H
Sbjct: 221 TTMISGCVKMGRSYVSLQ---LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 280
Query: 248 VIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNR-PET 307
+++ G + ++N L++ Y++CG + AHKLF +P ++++++ +++S G K N +
Sbjct: 281 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS-GYKQNALHKE 340
Query: 308 ALELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALID 367
A+ELF +M+ GL P + + + SC+ L + +G H+ ++ L +D +V +LID
Sbjct: 341 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 400
Query: 368 FYAKFKKLEEARHCFDEIAEKNLVSWNALILGYS-----------IDCYTSSMYLLIEML 427
YAK L +AR FD A ++V +NA+I GYS ++ + + LI
Sbjct: 401 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI--- 460
Query: 428 HFGYRPNEFTFSAIMK---TLLASELP-QIHCLVIRMGYEENDYVSSSLASSYAKHGLIS 487
RP+ TF ++++ +L + L QIH L+ + G + + S+L Y+ +
Sbjct: 461 ----RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 520
Query: 488 DVLAYVSDSNKQPSVVLSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMD 547
D S +V +DE ++ D++ WN + +
Sbjct: 521 D----------------SRLV---------FDE-------MKVKDLVIWNSMFAGYVQQS 580
Query: 548 NYFKVLELFKCMLVLQIYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVC 607
+ L LF + + + PD +TF ++++ L ++ LG H ++K G C + ++
Sbjct: 581 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC-NPYIT 640
Query: 608 NLLIYMYGKCGSIECALKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLK 667
N L+ MY KCGS E A K FD R+++ W VIS HG +AL+ L +M G++
Sbjct: 641 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 700
Query: 668 PDGVALGAVLTACKHGGLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEK 727
P+ + VL+AC H GLV++G++ F M +++GIEPE +HY C+V LL G + +A +
Sbjct: 701 PNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARE 735
BLAST of ClCG02G018000 vs. NCBI nr
Match:
gi|659113045|ref|XP_008456417.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Cucumis melo])
HSP 1 Score: 1326.6 bits (3432), Expect = 0.0e+00
Identity = 653/724 (90.19%), Postives = 682/724 (94.20%), Query Frame = 1
Query: 7 IIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSIGMLLV 66
IIKH HLLLHLLQ CSK P+ K TR LHALTITMGP+PNQA+FVHNNLM QY+SIGML +
Sbjct: 3 IIKHHHLLLHLLQACSKDPSLKITRSLHALTITMGPVPNQAIFVHNNLMSQYTSIGMLSM 62
Query: 67 ARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLLSVDLL 126
ARNLFDEMPHRNVVSYNTMISGY RLGFVKEAWDLF EMR CGFEPTQFTFGGLLSV+LL
Sbjct: 63 ARNLFDEMPHRNVVSYNTMISGYGRLGFVKEAWDLFSEMRNCGFEPTQFTFGGLLSVELL 122
Query: 127 DVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVTWNSIL 186
DVWQGAQLQGLSVKNGLF+SGAIVGT LLGLYGRDGCF EAL+V EDMC KSLVTWNSIL
Sbjct: 123 DVWQGAQLQGLSVKNGLFHSGAIVGTALLGLYGRDGCFEEALRVLEDMCWKSLVTWNSIL 182
Query: 187 SLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVIKIGFY 246
SLLGRNQ VDECK+MFCELMCEGME SKFSFVGVLSCFSR+EDLKFGQLLHGIVIKIGFY
Sbjct: 183 SLLGRNQLVDECKLMFCELMCEGMELSKFSFVGVLSCFSREEDLKFGQLLHGIVIKIGFY 242
Query: 247 YEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALELFYTM 306
YEVLVVNSL+NMYLQCGGF A KLFEEVPVRDVVTYNSII++GTKVNRPE ALELFY+M
Sbjct: 243 YEVLVVNSLLNMYLQCGGFFFADKLFEEVPVRDVVTYNSIIAVGTKVNRPEIALELFYSM 302
Query: 307 AANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYAKFKKL 366
AANGL PTQASFVNAV SCSCLGSSIYGEYFHSK VRYALESDVFVGTALIDFYAKFKKL
Sbjct: 303 AANGLTPTQASFVNAVNSCSCLGSSIYGEYFHSKTVRYALESDVFVGTALIDFYAKFKKL 362
Query: 367 EEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAIMKTLL 426
EEA HCFDEIAEKN+VSWNALILGYSI+CYTSS YLLI+MLHFGYRPNEFTFSAIMKTLL
Sbjct: 363 EEAHHCFDEIAEKNVVSWNALILGYSINCYTSSFYLLIKMLHFGYRPNEFTFSAIMKTLL 422
Query: 427 ASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLSNIVAA 486
SELPQIH L+IRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVV SNIVA
Sbjct: 423 VSELPQIHGLIIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVHSNIVAG 482
Query: 487 YYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIYPDNYT 546
YYNRV LYDETQKLLCPLEGPD+ISWNILIEACAKM+ YFKVLELFKCMLV QIYPDNYT
Sbjct: 483 YYNRVCLYDETQKLLCPLEGPDLISWNILIEACAKMNEYFKVLELFKCMLVHQIYPDNYT 542
Query: 547 FISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALKLFDKV 606
F SLLSVCAKLCNLALGSS+HGVMIK GSG CDTFVCNLLI MYGKCGSIECALK+FD+V
Sbjct: 543 FTSLLSVCAKLCNLALGSSIHGVMIKNGSGYCDTFVCNLLIDMYGKCGSIECALKIFDEV 602
Query: 607 KGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGLVKEGM 666
KGRNLITWTV+ISVLGLHGHAYEA+KR AEMELLGLKPD VAL AVLTACKHGGLV+EGM
Sbjct: 603 KGRNLITWTVLISVLGLHGHAYEAMKRFAEMELLGLKPDRVALIAVLTACKHGGLVEEGM 662
Query: 667 ELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFLEGCKR 726
ELFSKMKVKYG+EPEM+HYQCVVDLLSSHGHVVEAEKVIASMPFPP ALLWR FLEGCKR
Sbjct: 663 ELFSKMKVKYGVEPEMNHYQCVVDLLSSHGHVVEAEKVIASMPFPPDALLWRIFLEGCKR 722
Query: 727 QKTL 731
Q+TL
Sbjct: 723 QRTL 726
BLAST of ClCG02G018000 vs. NCBI nr
Match:
gi|568829463|ref|XP_006469042.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g58590 isoform X2 [Citrus sinensis])
HSP 1 Score: 859.0 bits (2218), Expect = 6.1e-246
Identity = 423/726 (58.26%), Postives = 550/726 (75.76%), Query Frame = 1
Query: 1 MSFNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSS 60
MSF+GD IKH +L LL+ CS+AP+ ++T+PLHALT+T GP P+Q +F++N+++ Y+S
Sbjct: 1 MSFHGDFIKHHQRILRLLKTCSRAPSLRSTKPLHALTVTAGPNPDQPIFLYNSIISLYAS 60
Query: 61 IGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGL 120
+G + AR LFD+MP RNVVS+N++IS YSR G+V++A +FL M GFEPTQFTFGGL
Sbjct: 61 LGEPVTARKLFDKMPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL 120
Query: 121 LSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLV 180
LS D L+ +GAQLQ +KNGLF + A VGT LLGLYGR GCF E + VFEDM KSLV
Sbjct: 121 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCFYEVVSVFEDMPRKSLV 180
Query: 181 TWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIV 240
TWNSI+S+LG++ FV++C +FCEL+ + ++ SFVGV+ S ++DL+FG+ +HG+V
Sbjct: 181 TWNSIVSILGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 240
Query: 241 IKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETAL 300
IK GF YE+LV NSLVNMY QC G A K+F+++ +RDVV++N+II + AL
Sbjct: 241 IKNGFDYELLVANSLVNMYFQCAGICSAEKMFKDLAIRDVVSWNTIIGALAESENFGKAL 300
Query: 301 ELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFY 360
EL+ M+ + + P Q +FV + SC+ L +SI G+ H+K ++ ALE DVFVG+AL+DFY
Sbjct: 301 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 360
Query: 361 AKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSA 420
AK LE A CF EI+ KN+VSWNALILGY+ +S++LLIE+L GY+PNEFTFS
Sbjct: 361 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYQPNEFTFSH 420
Query: 421 IMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVL 480
++++ LA EL Q+HCL+IRMGYE +YV SL SYAK GLISD LA+V+ N +VV
Sbjct: 421 VLRSSLAFELLQLHCLIIRMGYENYEYVLGSLMMSYAKSGLISDALAFVTALNIPRAVVP 480
Query: 481 SNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQI 540
+NI+A YNR G Y+ET KLL LE PDI+SWNI+I ACA +Y +VLELFK M +I
Sbjct: 481 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 540
Query: 541 YPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECAL 600
YPDNYTF+SLLS C+KLCNLALGSS+HG++ KT DTFVCN+LI MYGKCGSI ++
Sbjct: 541 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 600
Query: 601 KLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGG 660
K+F+++ RN+ITWT +IS LGL+G A AL+R EME LG KPD VAL AVLTAC+HGG
Sbjct: 601 KIFNEMTDRNVITWTALISALGLNGFAQRALERFREMEFLGFKPDRVALIAVLTACRHGG 660
Query: 661 LVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTF 720
LV+EGMELF +M YG+EPEMDHY CVVDLL +GH+ EAEK+I +MPFPP+AL+WRTF
Sbjct: 661 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 720
Query: 721 LEGCKR 727
LEGC+R
Sbjct: 721 LEGCQR 726
BLAST of ClCG02G018000 vs. NCBI nr
Match:
gi|1009137770|ref|XP_015886235.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Ziziphus jujuba])
HSP 1 Score: 849.0 bits (2192), Expect = 6.3e-243
Identity = 420/729 (57.61%), Postives = 544/729 (74.62%), Query Frame = 1
Query: 1 MSFNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSS 60
MS +G++ KH+ LL LL CS+ + K T+P HALT+T+G + NQ +FV+NN+M QY S
Sbjct: 1 MSLHGNLYKHQERLLQLLHACSRVRSLKATKPFHALTVTLGSVANQTIFVYNNIMSQYVS 60
Query: 61 IGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGL 120
+G L V + +F+ MP RNVVSYNT+I YSR GFV+EAW LFL+MR CGFEPTQFT GL
Sbjct: 61 LGELYVVQKVFNTMPQRNVVSYNTVIGAYSRCGFVEEAWKLFLDMRGCGFEPTQFTLVGL 120
Query: 121 LSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLV 180
LS + LD+ G QLQ L++KNGLF A VGT LLGLYGR EA+ FEDM KSLV
Sbjct: 121 LSCESLDLCHGVQLQALAIKNGLFVVDAFVGTALLGLYGRQPWLEEAVWTFEDMPYKSLV 180
Query: 181 TWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIV 240
TWN ++SL GR+ FV++ MF ELM S+ SFV VL FS K+DL+FG+ +HG+V
Sbjct: 181 TWNLMISLFGRHGFVEDTIFMFRELMKTRASLSELSFVAVLCGFSCKQDLEFGEQIHGLV 240
Query: 241 IKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETAL 300
+KIGF +EV V+NSL++MY++C G A K+FEEV VRDVV++N+II + RP AL
Sbjct: 241 MKIGFMHEVTVMNSLISMYVKCAGIHWAEKMFEEVAVRDVVSWNTIIGSAARSERPGRAL 300
Query: 301 ELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFY 360
EL M A G++PT ++VN + C+ L + GE H+K ++ + ESDV+VG+AL++FY
Sbjct: 301 ELSSKMFALGVLPTTITYVNLLTCCTGLMIRLIGESIHTKIIKNSFESDVYVGSALVNFY 360
Query: 361 AKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSA 420
AK KLE A CF I+ +N++SWNALILG S C ++++ LL EML GYRPNE++FSA
Sbjct: 361 AKRSKLEYAHRCFYRISARNVISWNALILGCSNHCMSAAVKLLQEMLQLGYRPNEYSFSA 420
Query: 421 IMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVL 480
++K+ LA EL Q+HCLVIRMG+E ND+V SSL +SYAK+GLISD L +V+ S+ SVV
Sbjct: 421 VLKSSLALELRQLHCLVIRMGFENNDFVLSSLITSYAKNGLISDALVFVTTSDHPLSVVS 480
Query: 481 SNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQI 540
N++A YNR G Y+ET KLL LE PD +SWNI+I ACA+ + Y +V EL+K M V +I
Sbjct: 481 CNVMAGIYNRAGQYNETLKLLSQLEEPDSVSWNIVIAACARNNYYKEVFELYKDMHVFEI 540
Query: 541 YPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECAL 600
P+ YTF+SLLSVCA LCNL+LGSSVHG +IK CDTF+CN+LI MYGKCGS+ +
Sbjct: 541 CPNKYTFVSLLSVCAALCNLSLGSSVHGHVIKNDFNHCDTFLCNVLIDMYGKCGSVASSR 600
Query: 601 KLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGG 660
++F+K+K RNLITWT +IS LG +G+A+EAL+R EM+L+G KPDGVAL AVLTAC+HGG
Sbjct: 601 RIFEKMKDRNLITWTALISALGHNGYAHEALERFNEMKLMGFKPDGVALNAVLTACRHGG 660
Query: 661 LVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTF 720
LVKEGMELF +MK YG+EPEMDHY CVVDLL+ +G EAEK+IA+MPF P+A++WR+F
Sbjct: 661 LVKEGMELFGRMKESYGVEPEMDHYHCVVDLLAKYGRTREAEKIIANMPFQPNAIIWRSF 720
Query: 721 LEGCKRQKT 730
LEG KR T
Sbjct: 721 LEGSKRHAT 729
BLAST of ClCG02G018000 vs. NCBI nr
Match:
gi|590603030|ref|XP_007019901.1| (Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao])
HSP 1 Score: 815.8 bits (2106), Expect = 5.9e-233
Identity = 410/730 (56.16%), Postives = 524/730 (71.78%), Query Frame = 1
Query: 1 MSFNGDII-KHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYS 60
MSFNGD + KH LL LL+ S P+ KTT+PLHAL IT+GP Q +FV+NN++ QY+
Sbjct: 1 MSFNGDFLFKHHERLLQLLKSWSAVPSLKTTKPLHALAITLGPYTCQPIFVYNNIISQYA 60
Query: 61 SIGMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGG 120
+ L AR +FD M RN VS+N+MIS Y + G V AWDLF MR CGF PT F G
Sbjct: 61 FLRHLSAARKVFDIMTERNPVSFNSMISAYGKCGDVWGAWDLFSMMRGCGFSPTPFALAG 120
Query: 121 LLSVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSL 180
LLS LD+ G+QLQ L VKNGLF + A VGT LLGLY R GC EA+Q FEDM KSL
Sbjct: 121 LLSCQALDLCGGSQLQALVVKNGLFDADAFVGTALLGLYARSGCVSEAVQAFEDMPRKSL 180
Query: 181 VTWNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGI 240
VTWNSI+SL V++C + F EL+ S SFVGVLS + D +FG+ +HG+
Sbjct: 181 VTWNSIISLYAHYGLVEDCMLSFRELLRLEASLSDCSFVGVLSGLEGELDSEFGEQIHGL 240
Query: 241 VIKIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETA 300
VIK GF YEV VVNSL+NMY++C LA K+F+ + ++DVV++N+II + P A
Sbjct: 241 VIKSGFDYEVTVVNSLINMYVKCVRLCLAEKVFQGMHIKDVVSWNTIIGALERDGSPLKA 300
Query: 301 LELFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDF 360
L+ F+ M+ +G++P Q + V + SCS L + G Y H+K ++ ESDVFVG+AL+DF
Sbjct: 301 LDFFFQMSMDGVMPNQTTLVIIIASCSSLQMPMLGAYIHAKTIKKGFESDVFVGSALVDF 360
Query: 361 YAKFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFS 420
YAK KL ++ CFD I EKN+VSWNALILGY+ T+ +LL++ML GYRPNEFTFS
Sbjct: 361 YAKCDKLVDSHQCFDGIYEKNVVSWNALILGYASKFCTTCSFLLLDMLQLGYRPNEFTFS 420
Query: 421 AIMKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVV 480
AI+K+ + EL Q+HC +IRMGYE N YV SSL +SYAK+GL+SD L +V+D + ++V
Sbjct: 421 AILKSSVTIELQQLHCFIIRMGYEHNVYVLSSLMTSYAKNGLLSDALPFVTDCERPLAIV 480
Query: 481 LSNIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQ 540
SNIVA YNRVG Y ET KLL LE PD++SWNI+I A A +Y +V ELF+ M + Q
Sbjct: 481 PSNIVAGIYNRVGQYQETLKLLSVLEEPDVVSWNIMIAASAHSGDYKEVFELFRHMQMTQ 540
Query: 541 IYPDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECA 600
IYPDNYTF+SLLSV +KL NLALGSSVHG++IKT CDTFVCN+L+ MYG+CG I+ +
Sbjct: 541 IYPDNYTFVSLLSVSSKLSNLALGSSVHGLIIKTDFSLCDTFVCNVLVNMYGECGCIKSS 600
Query: 601 LKLFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHG 660
+K+FD + RNLITWT +IS LG++G+++EAL+ EME LG KPDGVA A+LT C+H
Sbjct: 601 VKIFDGMADRNLITWTSLISALGVNGYSHEALENFQEMEFLGFKPDGVAFIAILTVCRHA 660
Query: 661 GLVKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRT 720
GLVKEGMELF +MK YG+EP+MDHY C+VDLL+ HG + EAE++IA M FPP AL+WR+
Sbjct: 661 GLVKEGMELFRRMKCDYGLEPKMDHYHCMVDLLARHGKLKEAEQIIAGMAFPPDALIWRS 720
Query: 721 FLEGCKRQKT 730
FLEGCKR T
Sbjct: 721 FLEGCKRHIT 730
BLAST of ClCG02G018000 vs. NCBI nr
Match:
gi|731408943|ref|XP_010657025.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Vitis vinifera])
HSP 1 Score: 813.5 bits (2100), Expect = 2.9e-232
Identity = 415/728 (57.01%), Postives = 530/728 (72.80%), Query Frame = 1
Query: 2 SFNGDIIKHRHLLLHLLQVCSKAPTFKTTRPLHALTITMGPIPNQAMFVHNNLMFQYSSI 61
S +G ++ + LLL LLQ C KAPT K T+PLHALT+TM Q +F++NNL+ Y
Sbjct: 43 SLHGQFMQQQRLLL-LLQACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQ 102
Query: 62 GMLLVARNLFDEMPHRNVVSYNTMISGYSRLGFVKEAWDLFLEMRECGFEPTQFTFGGLL 121
G L AR +F EM RNVVSYNT+I GYSR G V+EAW+LF EMR GFEPTQ TF GLL
Sbjct: 103 GELSTARKVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLL 162
Query: 122 SVDLLDVWQGAQLQGLSVKNGLFYSGAIVGTTLLGLYGRDGCFVEALQVFEDMCSKSLVT 181
S L + QG QLQ VK+GLF++ GT LL L+GR+GC E + FE+M K+LVT
Sbjct: 163 SCASLKLSQGFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVT 222
Query: 182 WNSILSLLGRNQFVDECKVMFCELMCEGMEPSKFSFVGVLSCFSRKEDLKFGQLLHGIVI 241
WN+++SL G F +E +F ELM G S+ SF+GVLS F+ ++DL+ G+ +H ++I
Sbjct: 223 WNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLI 282
Query: 242 KIGFYYEVLVVNSLVNMYLQCGGFLLAHKLFEEVPVRDVVTYNSIISMGTKVNRPETALE 301
K GF EV V+NSL+NMY++C LA K+FE VRDVV++N++I K RP LE
Sbjct: 283 KNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLE 342
Query: 302 LFYTMAANGLIPTQASFVNAVKSCSCLGSSIYGEYFHSKAVRYALESDVFVGTALIDFYA 361
LF M+ +G++P + +FV+ + SC+ L ++GEY H+K +R +ES+VFVG+AL+DFYA
Sbjct: 343 LFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYA 402
Query: 362 KFKKLEEARHCFDEIAEKNLVSWNALILGYSIDCYTSSMYLLIEMLHFGYRPNEFTFSAI 421
K LE A CFDEI EKN+V WNALILGYS C+ SS+ LL ML GY PNEF+FSA
Sbjct: 403 KCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCF-SSVSLLKRMLQLGYCPNEFSFSAA 462
Query: 422 MKTLLASELPQIHCLVIRMGYEENDYVSSSLASSYAKHGLISDVLAYVSDSNKQPSVVLS 481
+K+ L EL Q+HCL++RMGY++N+YVSS+L +SYAK+G+ISD L + + SNK V S
Sbjct: 463 LKSSLVFELQQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPS 522
Query: 482 NIVAAYYNRVGLYDETQKLLCPLEGPDIISWNILIEACAKMDNYFKVLELFKCMLVLQIY 541
N +A YN++G Y TQ L LE PDI+SWNILI ACA+ +Y +V ELFK M + QIY
Sbjct: 523 NAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIY 582
Query: 542 PDNYTFISLLSVCAKLCNLALGSSVHGVMIKTGSGCCDTFVCNLLIYMYGKCGSIECALK 601
PDNYT +SLLSVC KLCNLALGSS+HG +IKT CDTFV N+LI MYGKCG IE +LK
Sbjct: 583 PDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLK 642
Query: 602 LFDKVKGRNLITWTVVISVLGLHGHAYEALKRLAEMELLGLKPDGVALGAVLTACKHGGL 661
+F+K+ RN+ITWT +IS LG++G+A EALK EME LG KPDGVAL AV +AC+HGGL
Sbjct: 643 IFNKIIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGL 702
Query: 662 VKEGMELFSKMKVKYGIEPEMDHYQCVVDLLSSHGHVVEAEKVIASMPFPPSALLWRTFL 721
VKEGMELF +MK GIEP +DHY CVVDLL+ GH+ EAE+VI++MPFPP+AL+WR+FL
Sbjct: 703 VKEGMELFWQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFL 762
Query: 722 EGCKRQKT 730
EGCKR KT
Sbjct: 763 EGCKRWKT 768
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP286_ARATH | 4.1e-194 | 48.34 | Pentatricopeptide repeat-containing protein At3g58590 OS=Arabidopsis thaliana GN... | [more] |
| PP172_ARATH | 9.8e-87 | 31.86 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... | [more] |
| PP207_ARATH | 1.3e-83 | 28.43 | Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN... | [more] |
| PP220_ARATH | 1.7e-83 | 30.22 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| PP357_ARATH | 5.0e-83 | 29.48 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A061FJ78_THECC | 4.1e-233 | 56.16 | Pentatricopeptide repeat (PPR) superfamily protein, putative OS=Theobroma cacao ... | [more] |
| V4U7B0_9ROSI | 3.0e-228 | 57.62 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014349mg PE=4 SV=1 | [more] |
| B9IQQ4_POPTR | 2.7e-224 | 54.83 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12080g PE=4 SV=2 | [more] |
| B9SGL5_RICCO | 2.5e-222 | 52.74 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| A0A0D2VWJ7_GOSRA | 5.6e-222 | 53.87 | Uncharacterized protein OS=Gossypium raimondii GN=B456_012G071200 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G58590.1 | 2.3e-195 | 48.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G27610.1 | 5.5e-88 | 31.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G02330.1 | 7.5e-85 | 28.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G09040.1 | 9.7e-85 | 30.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G39530.1 | 2.8e-84 | 29.48 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
