ClCG02G016010 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTCAGACAAAATTAAATCTCTCTTCTTGAAGAACTAAAAGATGATGATGTTCTATAAGTCACTTGCCATCTTTAGTTGCCTATGCTTCTTCATGCCCATATCTTCTACTGCCCAATCTGATGGTCCTCCCGTGCTCGACACCGAAGGCCGACCTCTACAGCGCGACGTTGAGTACTTCATCAAGCCTGCCATCACTGATGTCGCTGGTAATCTTACCCTAATTACCCGAAAAGGTGATCAGTGCCCGTTTTACGTTGGGCAACTACCACTTCTTTCACAAGATATAGGTATATATTAAACTATAATACTAAACTCAATTGATTCATAAGTTATATCATATTTAATATTTTATATGTATTTGATATAACGTAAGCTGATAGATTATGATACATTTAATTCTCAACATTAGGCTATGGAGTCACCTTCAGGCCTTATCTAGAGGGTGAAGATACAATTAGAGAAGGTAGAGATTTGAAGGTCGTGTTTCAAGCTTTTTCAATTTGCATAACGTCGACTGAATGGAAAGTGGGGGAGGCAGATCCTACTACCGGAAGGAGGTTTGTGAAGCTCGGGAGTGACAACACTGCCACCGGGTACTTTAGGATCGACAAGAGCGACCTCGGAGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCCATTAGAGGGAGGCCAAGGTGTGGAAGTGCTGGAATTTTGATTGAGAAAGGTTTGAGGTTGTTGGCTTTGGATGGATCTGCATTTCCTTTTGAGTTTGTGAGAGTTGAGACAGCTGCAAAAGACCTTTGGTCAATCTTTCAACAGAAAAAATAAAGTGTGCAAATGTGTTCTAATTGCACTCATTTAAATTAAATAAAACCCCTGCAAGGATTTACTTTGTGTTCTTTAGTGTGTGTTATATTAATAATATGATTTGCC ATTTTTCAGACAAAATTAAATCTCTCTTCTTGAAGAACTAAAAGATGATGATGTTCTATAAGTCACTTGCCATCTTTAGTTGCCTATGCTTCTTCATGCCCATATCTTCTACTGCCCAATCTGATGGTCCTCCCGTGCTCGACACCGAAGGCCGACCTCTACAGCGCGACGTTGAGTACTTCATCAAGCCTGCCATCACTGATGTCGCTGGTAATCTTACCCTAATTACCCGAAAAGGTGATCAGTGCCCGTTTTACGTTGGGCAACTACCACTTCTTTCACAAGATATAGGCTATGGAGTCACCTTCAGGCCTTATCTAGAGGGTGAAGATACAATTAGAGAAGGTAGAGATTTGAAGGTCGTGTTTCAAGCTTTTTCAATTTGCATAACGTCGACTGAATGGAAAGTGGGGGAGGCAGATCCTACTACCGGAAGGAGGTTTGTGAAGCTCGGGAGTGACAACACTGCCACCGGGTACTTTAGGATCGACAAGAGCGACCTCGGAGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCCATTAGAGGGAGGCCAAGGTGTGGAAGTGCTGGAATTTTGATTGAGAAAGGTTTGAGGTTGTTGGCTTTGGATGGATCTGCATTTCCTTTTGAGTTTGTGAGAGTTGAGACAGCTGCAAAAGACCTTTGGTCAATCTTTCAACAGAAAAAATAAAGTGTGCAAATGTGTTCTAATTGCACTCATTTAAATTAAATAAAACCCCTGCAAGGATTTACTTTGTGTTCTTTAGTGTGTGTTATATTAATAATATGATTTGCC ATGATGATGTTCTATAAGTCACTTGCCATCTTTAGTTGCCTATGCTTCTTCATGCCCATATCTTCTACTGCCCAATCTGATGGTCCTCCCGTGCTCGACACCGAAGGCCGACCTCTACAGCGCGACGTTGAGTACTTCATCAAGCCTGCCATCACTGATGTCGCTGGTAATCTTACCCTAATTACCCGAAAAGGTGATCAGTGCCCGTTTTACGTTGGGCAACTACCACTTCTTTCACAAGATATAGGCTATGGAGTCACCTTCAGGCCTTATCTAGAGGGTGAAGATACAATTAGAGAAGGTAGAGATTTGAAGGTCGTGTTTCAAGCTTTTTCAATTTGCATAACGTCGACTGAATGGAAAGTGGGGGAGGCAGATCCTACTACCGGAAGGAGGTTTGTGAAGCTCGGGAGTGACAACACTGCCACCGGGTACTTTAGGATCGACAAGAGCGACCTCGGAGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCCATTAGAGGGAGGCCAAGGTGTGGAAGTGCTGGAATTTTGATTGAGAAAGGTTTGAGGTTGTTGGCTTTGGATGGATCTGCATTTCCTTTTGAGTTTGTGAGAGTTGAGACAGCTGCAAAAGACCTTTGGTCAATCTTTCAACAGAAAAAATAA MMMFYKSLAIFSCLCFFMPISSTAQSDGPPVLDTEGRPLQRDVEYFIKPAITDVAGNLTLITRKGDQCPFYVGQLPLLSQDIGYGVTFRPYLEGEDTIREGRDLKVVFQAFSICITSTEWKVGEADPTTGRRFVKLGSDNTATGYFRIDKSDLGVYNIGWCPSDVPIRGRPRCGSAGILIEKGLRLLALDGSAFPFEFVRVETAAKDLWSIFQQKK
BLAST of ClCG02G016010 vs. Swiss-Prot
Match: MIRA_SYNDU (Miraculin OS=Synsepalum dulcificum PE=1 SV=3) HSP 1 Score: 85.5 bits (210), Expect = 7.8e-16 Identity = 72/215 (33.49%), Postives = 100/215 (46.51%), Query Frame = 1
BLAST of ClCG02G016010 vs. Swiss-Prot
Match: IAAS_HORVU (Alpha-amylase/subtilisin inhibitor OS=Hordeum vulgare PE=1 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 8.1e-13 Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 1
BLAST of ClCG02G016010 vs. Swiss-Prot
Match: IAAS_ORYSJ (Alpha-amylase/subtilisin inhibitor OS=Oryza sativa subsp. japonica GN=RASI PE=1 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 8.9e-12 Identity = 61/178 (34.27%), Postives = 81/178 (45.51%), Query Frame = 1
BLAST of ClCG02G016010 vs. Swiss-Prot
Match: IAAS_WHEAT (Endogenous alpha-amylase/subtilisin inhibitor OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11 Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 1
BLAST of ClCG02G016010 vs. Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.2e-09 Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 1
BLAST of ClCG02G016010 vs. TrEMBL
Match: A0A0A0LGB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021000 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 3.0e-99 Identity = 180/217 (82.95%), Postives = 198/217 (91.24%), Query Frame = 1
BLAST of ClCG02G016010 vs. TrEMBL
Match: A0A0A0LIK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021500 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51 Identity = 107/183 (58.47%), Postives = 130/183 (71.04%), Query Frame = 1
BLAST of ClCG02G016010 vs. TrEMBL
Match: D1KFM3_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50 Identity = 108/183 (59.02%), Postives = 123/183 (67.21%), Query Frame = 1
BLAST of ClCG02G016010 vs. TrEMBL
Match: G0Z2L7_POPNI (Kunitz-type trypsin inhibitor C5 OS=Populus nigra PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50 Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 1
BLAST of ClCG02G016010 vs. TrEMBL
Match: D1KFM4_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus nigra PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50 Identity = 108/183 (59.02%), Postives = 123/183 (67.21%), Query Frame = 1
BLAST of ClCG02G016010 vs. NCBI nr
Match: gi|449442849|ref|XP_004139193.1| (PREDICTED: endogenous alpha-amylase/subtilisin inhibitor-like [Cucumis sativus]) HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99 Identity = 180/217 (82.95%), Postives = 198/217 (91.24%), Query Frame = 1
BLAST of ClCG02G016010 vs. NCBI nr
Match: gi|659070428|ref|XP_008455022.1| (PREDICTED: miraculin-like isoform X2 [Cucumis melo]) HSP 1 Score: 363.6 bits (932), Expect = 2.4e-97 Identity = 179/216 (82.87%), Postives = 192/216 (88.89%), Query Frame = 1
BLAST of ClCG02G016010 vs. NCBI nr
Match: gi|659070426|ref|XP_008455014.1| (PREDICTED: miraculin-like isoform X1 [Cucumis melo]) HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95 Identity = 178/217 (82.03%), Postives = 192/217 (88.48%), Query Frame = 1
BLAST of ClCG02G016010 vs. NCBI nr
Match: gi|449442847|ref|XP_004139192.1| (PREDICTED: miraculin-like [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 1.1e-57 Identity = 118/200 (59.00%), Postives = 142/200 (71.00%), Query Frame = 1
BLAST of ClCG02G016010 vs. NCBI nr
Match: gi|700205760|gb|KGN60879.1| (hypothetical protein Csa_2G021500 [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 3.3e-51 Identity = 107/183 (58.47%), Postives = 130/183 (71.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|