ClCG02G015600 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G015600
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Dynein light chain, cytoplasmic
Location	CG_Chr02 : 29881639 .. 29882246 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTAGTTTGAAACCAACTGTTTCTTTACTACGAAAGGGTGGGAGAAGGAGGTCATTTGCTGGTTCACAAGTTGAATTGAGTGATATTTTTGCCAAAAATGGTGTGAAAGTGGTTTCTGTTGATATGCTACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGGTTATGTATACAATCTGTGCAAGTTTTTGGAATGAATTAGCTAATAATTTCTCTTGTTTGCTTGCTTGCTTGTGGTTTTGCAGGAATTTGATGGGGTGTATGGTCCGGCCTGGCACTGCATCGTAGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCCGTACAAAGAGCTGATTGAAATTGAAGTAGATGTCCAAAACACAGCTGGGAAATCCAATAAATTTGGCATATTAGAGTTTAAGAAAGGTAAAAGAGACCGTCCATCCGAATACTTGTACATTGATTATGATAAGAAACACACCAA

mRNA sequence

CTTGTTAGTTTGAAACCAACTGTTTCTTTACTACGAAAGGGTGGGAGAAGGAGGTCATTTGCTGGTTCACAAGTTGAATTGAGTGATATTTTTGCCAAAAATGGTGTGAAAGTGGTTTCTGTTGATATGCTACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAGAGGGAATTTGATGGGGTGTATGGTCCGGCCTGGCACTGCATCGTAGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCCGTACAAAGAGCTGATTGAAATTGAAGTAGATGTCCAAAACACAGCTGGGAAATCCAATAAATTTGGCATATTAGAGTTTAAGAAAGGTAAAAGAGACCGTCCATCCGAATACTTGTACATTGATTATGATAAGAAACACACCAA

Coding sequence (CDS)

ATGCTACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAGAGGGAATTTGATGGGGTGTATGGTCCGGCCTGGCACTGCATCGTAGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCCGTACAAAGAGCTGATTGA

Protein sequence

MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD

Homology

[Close]

BLAST of ClCG02G015600 vs. Swiss-Prot
Match: DYL2_BOVIN (Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-13
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
          MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG +FGS+VTH    F
Sbjct: 17 MQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHF 76

Query: 65 LYFSMDQKLYILLFKT 80
          +YF + Q + ILLFK+
Sbjct: 77 IYFYLGQ-VAILLFKS 88

[Close]

BLAST of ClCG02G015600 vs. Swiss-Prot
Match: DYL2_HUMAN (Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-13
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
          MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG +FGS+VTH    F
Sbjct: 17 MQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHF 76

Query: 65 LYFSMDQKLYILLFKT 80
          +YF + Q + ILLFK+
Sbjct: 77 IYFYLGQ-VAILLFKS 88

[Close]

BLAST of ClCG02G015600 vs. Swiss-Prot
Match: DYL2_MOUSE (Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-13
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
          MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG +FGS+VTH    F
Sbjct: 17 MQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHF 76

Query: 65 LYFSMDQKLYILLFKT 80
          +YF + Q + ILLFK+
Sbjct: 77 IYFYLGQ-VAILLFKS 88

[Close]

BLAST of ClCG02G015600 vs. Swiss-Prot
Match: DYL2_RAT (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-13
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
          MQ  AVDCA +A   MEK+   K +A  +K+EFD  Y P WHCIVG +FGS+VTH    F
Sbjct: 17 MQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHF 76

Query: 65 LYFSMDQKLYILLFKT 80
          +YF + Q + ILLFK+
Sbjct: 77 IYFYLGQ-VAILLFKS 88

[Close]

BLAST of ClCG02G015600 vs. Swiss-Prot
Match: DYL1_HELCR (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-13
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
          MQ  AVDCA +A   +EKF   K +A  +K+EFD  Y P WHCIVG +FGS+VTH    F
Sbjct: 17 MQQDAVDCATQA---LEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHF 76

Query: 65 LYFSMDQKLYILLFKT 80
          +YF + Q + +LLFK+
Sbjct: 77 IYFYLGQ-VAVLLFKS 88

[Close]

BLAST of ClCG02G015600 vs. TrEMBL
Match: A0A0A0LW58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G045690 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M PAMQIHAVDCARK HDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 203 MQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 262

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 263 GGFLYFSLDQKLYILLFKTSVQRAD 287

[Close]

BLAST of ClCG02G015600 vs. TrEMBL
Match: S1SMA4_THECC (Dynein light chain type 1 family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_045717 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-38
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARK HDS+EKFTSKTLAL+LK+EFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 207 MPPFMQIHAVDCARKTHDSLEKFTSKTLALTLKKEFDGVYGPAWHCIVGTSFGSFVTHSV 266

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLY+LLFKT+VQRAD
Sbjct: 267 GGFLYFSMDQKLYVLLFKTTVQRAD 291

[Close]

BLAST of ClCG02G015600 vs. TrEMBL
Match: B9S757_RICCO (Axonemal dynein light chain, putative OS=Ricinus communis GN=RCOM_1333990 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.4e-38
Identity = 76/85 (89.41%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARK HDS+EKFTSKTLAL+LK+EFDG+YGPAWHCIVGTSFGSFVTHSV
Sbjct: 219 MPPFMQIHAVDCARKTHDSLEKFTSKTLALTLKKEFDGIYGPAWHCIVGTSFGSFVTHSV 278

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLY+LLFKT+VQRAD
Sbjct: 279 GGFLYFSMDQKLYVLLFKTTVQRAD 303

[Close]

BLAST of ClCG02G015600 vs. TrEMBL
Match: A0A0D2U5R9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G189800 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 5.8e-38
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARK HDS+EKFTSK LAL+LK+EFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 206 MPPFMQIHAVDCARKTHDSLEKFTSKALALTLKKEFDGVYGPAWHCIVGTSFGSFVTHSV 265

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLY+LLFKTSVQRAD
Sbjct: 266 GGFLYFSMDQKLYVLLFKTSVQRAD 290

[Close]

BLAST of ClCG02G015600 vs. TrEMBL
Match: A0A072V1C9_MEDTR (Dynein light chain type 1 family protein OS=Medicago truncatula GN=MTR_4g107350 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.5e-38
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARKA DSMEKFTSKTLALSLK+EFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 223 MPPFMQIHAVDCARKAFDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSV 282

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLYIL+FKT+VQ+AD
Sbjct: 283 GGFLYFSMDQKLYILIFKTAVQKAD 307

[Close]

BLAST of ClCG02G015600 vs. TAIR10
Match: AT5G20110.1 (AT5G20110.1 Dynein light chain type 1 family protein)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-26
Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 5   MQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFL 64
           MQ HA  CAR   DS+EKF+SK +A +LK+EFD  YGPAWHCIVG+SFGSFVTHS G F+
Sbjct: 128 MQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFI 187

Query: 65  YFSMDQKLYILLFKTSVQRA 85
           YFSMD KLY+LLFKT V+ A
Sbjct: 188 YFSMD-KLYVLLFKTKVRPA 206

[Close]

BLAST of ClCG02G015600 vs. TAIR10
Match: AT1G23220.1 (AT1G23220.1 Dynein light chain type 1 family protein)

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-20
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 1


Query: 22  KFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTSV 81
           K  +K LA +LK++FD  YGPAWHCIVGTSFGS+VTHS GGFLYF +D K+Y+LLFKT+V
Sbjct: 65  KADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQID-KVYVLLFKTAV 124

Query: 82  QRAD 86
           +  D
Sbjct: 125 EPLD 127

[Close]

BLAST of ClCG02G015600 vs. TAIR10
Match: AT4G27360.1 (AT4G27360.1 Dynein light chain type 1 family protein)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-12
Identity = 39/81 (48.15%), Postives = 46/81 (56.79%), Query Frame = 1


Query: 1  MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
          M   M+  A+  A KA D  +      +A  +K+EFD  YG  W CIVGT FGSFVTH  
Sbjct: 13 MKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVTHCS 72

Query: 61 GGFLYFSMDQKLYILLFKTSV 82
          G F++FS+   L ILLFK SV
Sbjct: 73 GCFIHFSVG-SLTILLFKGSV 92

[Close]

BLAST of ClCG02G015600 vs. TAIR10
Match: AT4G15930.1 (AT4G15930.1 Dynein light chain type 1 family protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 5   MQIHAVDCARKAHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGF 64
           MQ  A++ A  A    EK++  K +A ++K+EFD  +G  WHCIVG +FGS+VTH    F
Sbjct: 51  MQKEAIEIAISA---FEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHF 110

Query: 65  LYFSMDQKLYILLFKT 80
           +YF +DQK  +LLFK+
Sbjct: 111 VYFYLDQKA-VLLFKS 122

[Close]

BLAST of ClCG02G015600 vs. TAIR10
Match: AT3G16120.1 (AT3G16120.1 Dynein light chain type 1 family protein)

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-12
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 1


Query: 5  MQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFL 64
          MQ+ A+  A ++ D  + F S ++A  +K+EFD  YG  W C+VGT+FG F THS G F+
Sbjct: 17 MQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGCFFTHSKGTFI 76

Query: 65 YFSMDQKLYILLFK 79
          YF +   L  L+FK
Sbjct: 77 YFHLG-TLNFLIFK 89

[Close]

BLAST of ClCG02G015600 vs. NCBI nr
Match: gi|778657659|ref|XP_004152543.2| (PREDICTED: uncharacterized protein LOC101220241 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 5.2e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M PAMQIHAVDCARK HDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 203 MQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 262

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 263 GGFLYFSLDQKLYILLFKTSVQRAD 287

[Close]

BLAST of ClCG02G015600 vs. NCBI nr
Match: gi|659067124|ref|XP_008437777.1| (PREDICTED: uncharacterized protein LOC103483107 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 5.2e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M PAMQIHAVDCARK HDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 205 MQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 264

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 265 GGFLYFSLDQKLYILLFKTSVQRAD 289

[Close]

BLAST of ClCG02G015600 vs. NCBI nr
Match: gi|590729196|ref|XP_007099744.1| (Dynein light chain type 1 family protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-38
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARK HDS+EKFTSKTLAL+LK+EFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 207 MPPFMQIHAVDCARKTHDSLEKFTSKTLALTLKKEFDGVYGPAWHCIVGTSFGSFVTHSV 266

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLY+LLFKT+VQRAD
Sbjct: 267 GGFLYFSMDQKLYVLLFKTTVQRAD 291

[Close]

BLAST of ClCG02G015600 vs. NCBI nr
Match: gi|255561632|ref|XP_002521826.1| (PREDICTED: uncharacterized protein LOC8283253 [Ricinus communis])

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-38
Identity = 76/85 (89.41%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARK HDS+EKFTSKTLAL+LK+EFDG+YGPAWHCIVGTSFGSFVTHSV
Sbjct: 219 MPPFMQIHAVDCARKTHDSLEKFTSKTLALTLKKEFDGIYGPAWHCIVGTSFGSFVTHSV 278

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLY+LLFKT+VQRAD
Sbjct: 279 GGFLYFSMDQKLYVLLFKTTVQRAD 303

[Close]

BLAST of ClCG02G015600 vs. NCBI nr
Match: gi|502152176|ref|XP_004508801.1| (PREDICTED: uncharacterized protein LOC101499740 [Cicer arietinum])

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-38
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1   MLPAMQIHAVDCARKAHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSV 60
           M P MQIHAVDCARKA DSMEKFTSKTLALSLK+EFDGVYGPAWHCIVGTSFGSFVTHSV
Sbjct: 223 MPPFMQIHAVDCARKAFDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSV 282

Query: 61  GGFLYFSMDQKLYILLFKTSVQRAD 86
           GGFLYFSMDQKLYILLFKT+VQ+AD
Sbjct: 283 GGFLYFSMDQKLYILLFKTAVQKAD 307

The following BLAST results are available for this feature:

BLAST of ClCG02G015600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DYL2_BOVIN	5.4e-13	52.63	Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1	[more]
DYL2_HUMAN	5.4e-13	52.63	Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1 SV=1	[more]
DYL2_MOUSE	5.4e-13	52.63	Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1 SV=1	[more]
DYL2_RAT	5.4e-13	52.63	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2 PE=1 SV=1	[more]
DYL1_HELCR	7.1e-13	51.32	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina PE=3 SV=...	[more]

BLAST of ClCG02G015600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW58_CUCSA	3.6e-40	96.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G045690 PE=4 SV=1	[more]
S1SMA4_THECC	3.4e-38	90.59	Dynein light chain type 1 family protein, putative isoform 2 OS=Theobroma cacao ...	[more]
B9S757_RICCO	4.4e-38	89.41	Axonemal dynein light chain, putative OS=Ricinus communis GN=RCOM_1333990 PE=4 S...	[more]
A0A0D2U5R9_GOSRA	5.8e-38	90.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G189800 PE=4 SV=1	[more]
A0A072V1C9_MEDTR	7.5e-38	91.76	Dynein light chain type 1 family protein OS=Medicago truncatula GN=MTR_4g107350 ...	[more]

BLAST of ClCG02G015600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20110.1	1.2e-26	70.00	Dynein light chain type 1 family protein	[more]
AT1G23220.1	3.7e-20	67.19	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.3e-12	48.15	Dynein light chain type 1 family protein	[more]
AT4G15930.1	1.7e-12	47.37	Dynein light chain type 1 family protein	[more]
AT3G16120.1	2.9e-12	44.59	Dynein light chain type 1 family protein	[more]

BLAST of ClCG02G015600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657659\|ref\|XP_004152543.2\|	5.2e-40	96.47	PREDICTED: uncharacterized protein LOC101220241 [Cucumis sativus]	[more]
gi\|659067124\|ref\|XP_008437777.1\|	5.2e-40	96.47	PREDICTED: uncharacterized protein LOC103483107 [Cucumis melo]	[more]
gi\|590729196\|ref\|XP_007099744.1\|	4.9e-38	90.59	Dynein light chain type 1 family protein, putative isoform 2 [Theobroma cacao]	[more]
gi\|255561632\|ref\|XP_002521826.1\|	6.3e-38	89.41	PREDICTED: uncharacterized protein LOC8283253 [Ricinus communis]	[more]
gi\|502152176\|ref\|XP_004508801.1\|	6.3e-38	92.94	PREDICTED: uncharacterized protein LOC101499740 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001372	Dynein_light_chain_typ-1/2

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0030286	dynein complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G015600.1	ClCG02G015600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	GENE3D	G3DSA:3.30.740.10		coord: 1..79 score: 4.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..84 score: 3.8
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 1..79 score: 2.1
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..79 score: 8.1
None	No IPR available	PANTHER	PTHR11886:SF37	SUBFAMILY NOT NAMED	coord: 1..84 score: 3.8
None	No IPR available	unknown	SSF54648	DLC	coord: 4..79 score: 1.44

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G015600	Watermelon (97103) v2	wcgwmbB138
ClCG02G015600	Wax gourd	wcgwgoB262
ClCG02G015600	Cucumber (Gy14) v1	cgywcgB103
ClCG02G015600	Cucurbita maxima (Rimu)	cmawcgB156
ClCG02G015600	Cucurbita maxima (Rimu)	cmawcgB695
ClCG02G015600	Cucurbita maxima (Rimu)	cmawcgB696
ClCG02G015600	Cucurbita moschata (Rifu)	cmowcgB144
ClCG02G015600	Cucurbita moschata (Rifu)	cmowcgB700
ClCG02G015600	Cucurbita moschata (Rifu)	cmowcgB701
ClCG02G015600	Wild cucumber (PI 183967)	cpiwcgB128
ClCG02G015600	Cucumber (Chinese Long) v2	cuwcgB122
ClCG02G015600	Melon (DHL92) v3.5.1	mewcgB375
ClCG02G015600	Watermelon (97103) v1	wcgwmB197
ClCG02G015600	Cucurbita pepo (Zucchini)	cpewcgB104
ClCG02G015600	Cucurbita pepo (Zucchini)	cpewcgB105
ClCG02G015600	Cucurbita pepo (Zucchini)	cpewcgB733
ClCG02G015600	Bottle gourd (USVL1VR-Ls)	lsiwcgB098
ClCG02G015600	Cucumber (Gy14) v2	cgybwcgB119
ClCG02G015600	Melon (DHL92) v3.6.1	medwcgB369
ClCG02G015600	Silver-seed gourd	carwcgB0692
ClCG02G015600	Silver-seed gourd	carwcgB0719
ClCG02G015600	Cucumber (Chinese Long) v3	cucwcgB137