ClCG02G014710 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAGTAAGAAAAAGAAGAAAATTGCAGAATAATAATGGGAAAGAAGATGATGAAGATGAAGAGGAAAAGCTGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATGAGAGACAGAATGAAACCAAAAGAACCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTAACCTTAATCTCTCTCTTTGA ATGGAAGGAGTAAGAAAAAGAAGAAAATTGCAGAATAATAATGGGAAAGAAGATGATGAAGATGAAGAGGAAAAGCTGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATGAGAGACAGAATGAAACCAAAAGAACCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTAACCTTAATCTCTCTCTTTGA ATGGAAGGAGTAAGAAAAAGAAGAAAATTGCAGAATAATAATGGGAAAGAAGATGATGAAGATGAAGAGGAAAAGCTGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATGAGAGACAGAATGAAACCAAAAGAACCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTAACCTTAATCTCTCTCTTTGA MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL
BLAST of ClCG02G014710 vs. Swiss-Prot
Match: NIMI3_ARATH (Protein NIM1-INTERACTING 3 OS=Arabidopsis thaliana GN=NIMIN-3 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.8e-07 Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 1
BLAST of ClCG02G014710 vs. TrEMBL
Match: A0A0A0LJ23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034770 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 4.2e-34 Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 1
BLAST of ClCG02G014710 vs. TrEMBL
Match: A0A0D2U4L1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G208900 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-17 Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
BLAST of ClCG02G014710 vs. TrEMBL
Match: A0A061F4Z3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026807 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 6.3e-14 Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of ClCG02G014710 vs. TrEMBL
Match: V4SLD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013538mg PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13 Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 1
BLAST of ClCG02G014710 vs. TrEMBL
Match: A0A0B0NY26_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22673 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.0e-13 Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1
BLAST of ClCG02G014710 vs. TAIR10
Match: AT1G09415.1 (AT1G09415.1 NIM1-interacting 3) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 1
BLAST of ClCG02G014710 vs. TAIR10
Match: AT4G01895.1 (AT4G01895.1 systemic acquired resistance (SAR) regulator protein NIMIN-1-related) HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06 Identity = 43/147 (29.25%), Postives = 68/147 (46.26%), Query Frame = 1
BLAST of ClCG02G014710 vs. NCBI nr
Match: gi|700205905|gb|KGN61024.1| (hypothetical protein Csa_2G034770 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 6.1e-34 Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 1
BLAST of ClCG02G014710 vs. NCBI nr
Match: gi|823264366|ref|XP_012464926.1| (PREDICTED: uncharacterized protein LOC105783814 [Gossypium raimondii]) HSP 1 Score: 95.9 bits (237), Expect = 5.2e-17 Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
BLAST of ClCG02G014710 vs. NCBI nr
Match: gi|590644944|ref|XP_007031220.1| (Uncharacterized protein TCM_026807 [Theobroma cacao]) HSP 1 Score: 85.1 bits (209), Expect = 9.1e-14 Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of ClCG02G014710 vs. NCBI nr
Match: gi|657999954|ref|XP_008392413.1| (PREDICTED: protein NIM1-INTERACTING 1 [Malus domestica]) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13 Identity = 53/133 (39.85%), Postives = 76/133 (57.14%), Query Frame = 1
BLAST of ClCG02G014710 vs. NCBI nr
Match: gi|658042551|ref|XP_008356898.1| (PREDICTED: protein NIM1-INTERACTING 3-like [Malus domestica]) HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |