ClCG02G013410 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G013410
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr02 : 27328328 .. 27331432 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCAGTTTGCGCACGCCTCCAAGGGCTGTGTAACGGGAAGCTGTTGAGTTGAGCTTCAAAGTCCTTCCAATTATACAATTTTGTTGCCTTTCTCTTCCTTTACTCATACCTTCCTTCCATTTTCTACTTTTCCTCAAACTCAAATCCACATTCACCAACCAATTTTATTCCCAAATTCAATCTCTCTATGAAATTCTAGTTTCCCCCAATATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGGTATGCCGTATCTCGGCTTGTCTTTTTAACGACCAGTGTAAGAATTTTTTTATATGTGTAGCTGGTGTAAGAAAATTTTTTTCACGACTTGAAGGGGAATTTTTCGATTATGTCGAGAATTAGATTCGAGTAGTTTTCTGATACAGAATTCGGTCGAATTCGTTGGTGCTGTTTCACTCTATTTTCCAATTTTGGATTTCTAGATTCCGCCATAGCTACGGAATCAATTGCGTGGTTGTTTCCACCTAGATTGATCAGTTTTTTGCTGGCTAATGGGCGAGAATATTGGGAGACAGAACTCTTTAGGTCTATTCACGAATTGAGTATTTCGTTTACACTACATAGGAAAATTGGTGTTGATAGTGTCAAGAGGTTCCCTGTGATGGTTGAAAATCAGGGAGGTTTTTCAATTTTATAAAGAGTTGGTTACCCGTGCGAGCTTTGCCCTCTGTCTAGTGCCCAAAATTTTCTTTGATTCAACTCAAAATTCATGGGTAGCAGGACAAGGAACGAACGATCTTCCCTAAGGCCTTGTGAAACTGTAATATTTGCACAATTGGGTGGATGGAGATTTCTGCTGGAAGCTCTTGCTTGTACCTGTCCAGAACGATTCAAAATGAAAAATTAGGTCAGGAATTGTGTCAGGTGAGTTTCTCATCGAGGTGCGCTGCAATTGAACACTAGACATGGAGTTTGAGATATAGACCATTTTGCCATTGCCCACAGCCAGCTAAAAATTTTGGAACTGAATGTCTTTATTAACTTTGATCTTGCTCTGTGCTTGAGCTGAATGTTGCTGGAGCTCAGCCAAAATTGCATTGCGTCACAACCTTGCAGCTATTGGTCAATAGCAAAATTTACAATTGGAATTTGTCCATAACATAGTATAGGAGGGGGTGTCTTCCATAGACAATGAAGAAAGGGGTTGTTGGTGAAATTATGGAAACTGGCATTGCACCAACATTCTACTTGAGGAATATCCAGAAATGGCTCAGAAAAATTGTATCTGAGATGGAGAAGGAAAACCCATGTAAGTAGCCTTGCGATTTTACTGAATGAAGATGCCAGCCATAGAGTGAGAATAGAAGGCAAAAATGACAAAATTGACATCAGCAATCTGCCACAGCTTCCTTCAAGGAGCTTGGAATCCATTCAGAGCACTTTCGCTGGGTCTTATCCAAGGACATTTGTTAACTTCACTTCATTCTGAACCGAAGGTTTTATGGATCTCTCCAACCAAGTAGACACTCTCACTCATTCACCTCACCAATTCCTTTCTCAAGAGACTCAACTTTTTACTCCATCTCCTTCTATGCAATGGTAATGGATTGAACAGCTTCTATATCATAGATGCAATCCTGATGTCAACGAAGAAAATAACGACAATGGTGTTAGCTTCTATGAATAGGGTCTTTTATTAATGCTTGAAAGCTATAATTCAGAGCAATGGTGTTAGCTTTTGGTGAGTATTAACTCTCTCTTGAATAGATTCTTCCTGCCCCCCAATAGATCACCCCCTCGTGTATTCCTATCCCTTGCAACTAACTAGCAGCCCCGCAAAAGATGGTAACGGATAGCTTCAGTGCCATGGATAGGATTCTTATCTCAATGAAGATCACGAATACAAATAGAGGGTTTTTATAAATGCTTTCCGAGGAATGGTGTTAGCATTTTGTGAGGATTGAATCTCTCTCTGCTAGATTCTTCCTGCCCCCCTTAGATCACCCCCTCGTAAGCCAACATTCTTGTAACTAGAGTTTGTTTTATTATTTACAGATGGAGTATTTTTTATCCAGGAAAGTATTGATGCCTAATAAGTATCTATTTCAACTATTAGATGGTGAAACCGAATGAGTGGGTCCTCTGAACCAGAGTATTATGCTTTTTGTTAAATTATCTGTCGTTATTTGTTAAATTGATTTGCATTATGAGCCTAATGTCACTCAAGAGTAGTTTTATATACATCATTAGCCCACTACGAATAAGCAAGAAGTTTGGTCTTCTTAGGGTGTGTTTTGTGCATTTAAAATATTGTCCACGAAAGACCCTAAATTTCCAATTCAGTACAATAAAACAAAAGGAGGCCATCCCCACCCACCACCCGCTCAAGCCCCCCACCCACAAAAAGAGAGGAAAAAAAAAGGAGAGGAAAAAGGGAAAAAGAGGAGAAACGTGTCTAAGAATTGCTTCTAAGTTTTAGTTTTATGGAAGGGAAGAATTGAACTCAAGTTGGCTTGTTGCACATTGTATCATTAGTTCTACATATTCTAAATTCGTAGCCTCAGGCAAAGTGAACTTTGCTTGTTGTATGTATCGGTACAAAAGTTTACCATTCAAGTACATTGAATTTCTAGATTCATAATCTCTAAAATTGTAAGAAAACAATATGCAGATCAGTAACGAGCAAAGCATCAGGGGGGAGATAACAAGTAGTACGAGCAGGAGAATCACACAAGTGGGAGAAGGCACTGTAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGTTAGATCTTCACCCTTGCAGTTATTTCAGGCTTGCTAAATCAGCTTTTCTCAGGTGCCTTGGGTTGGACTCTTCAACTGAGAACTCAGTCTCAGATGGAAGACAAAGACAGGAGTCAAGAAAATCCAAAGAAAGTTGAT

mRNA sequence

GTCCAGTTTGCGCACGCCTCCAAGGGCTGTGTAACGGGAAGCTGTTGAGTTGAGCTTCAAAGTCCTTCCAATTATACAATTTTGTTGCCTTTCTCTTCCTTTACTCATACCTTCCTTCCATTTTCTACTTTTCCTCAAACTCAAATCCACATTCACCAACCAATTTTATTCCCAAATTCAATCTCTCTATGAAATTCTAGTTTCCCCCAATATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGATCAGTAACGAGCAAAGCATCAGGGGGGAGATAACAAGTAGTACGAGCAGGAGAATCACACAAGTGGGAGAAGGCACTGTAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGTTAGATCTTCACCCTTGCAGCTTGCTAAATCAGCTTTTCTCAGGTGCCTTGGGTTGGACTCTTCAACTGAGAACTCAGTCTCAGATGGAAGACAAAGACAGGAGTCAAGAAAATCCAAAGAAAGTTGAT

Coding sequence (CDS)

ATGTTCAATTTTGAAGATGAGCTCATAATCGAACCAGGATATTCATGCTTAATCTGGGTTCAGCTTCTTGTTATTCTCCTCATCTTCGTCCTTTGTTCTCTTACCATCTTCGCTATTGATTTCTCCAAAACCAATACTACTGATATCAACTCCACTACCGCCATTGCCTCCTCTTCCACTACTCGCTTCCTTTCTCATACTTCTCACAACGGGAAGATCAGAATTGACCCTAATCCACCGCGAAATGCGCAGATCAGTAACGAGCAAAGCATCAGGGGGGAGATAACAAGTAGTACGAGCAGGAGAATCACACAAGTGGGAGAAGGCACTGTAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGTTAGATCTTCACCCTTGCAGCTTGCTAAATCAGCTTTTCTCAGGTGCCTTGGGTTGGACTCTTCAACTGAGAACTCAGTCTCAGATGGAAGACAAAGACAGGAGTCAAGAAAATCCAAAGAAAGTTGAT

Protein sequence

MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTTRFLSHTSHNGKIRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEGSQETKLDLHPCSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKKVD

Homology

[Close]

BLAST of ClCG02G013410 vs. TrEMBL
Match: A0A0A0LM30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296040 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.9e-52
Identity = 116/172 (67.44%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 1   MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
           MFNFEDELII+PG S LIW+QLLVILLIF LC LTIFA DFSK+NTTD NST AIASSS+
Sbjct: 1   MFNFEDELIIQPGISWLIWIQLLVILLIFFLCCLTIFAFDFSKSNTTDFNSTAAIASSSS 60

Query: 61  -TRFLSHTSHNGK-------IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVV 120
            TRFLSH++H+GK       IRI PNPPRNAQ++N+QS RGEITSSTSRRITQVGEGTV+
Sbjct: 61  PTRFLSHSTHSGKNILPNPNIRIGPNPPRNAQVTNDQSTRGEITSSTSRRITQVGEGTVI 120

Query: 121 GGEGSQETKLDLHPCS---LLNQLFSGALGWTLQLRTQSQMEDKDRSQENPK 162
           GGE SQETKLDLHPCS   L    F   LG  L   T + + D+ +  E+ K
Sbjct: 121 GGEVSQETKLDLHPCSYFRLAKSAFLRCLG--LDSSTDNSISDERQRNESRK 170

[Close]

BLAST of ClCG02G013410 vs. TrEMBL
Match: B9SRQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0666220 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08
Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 1


Query: 1   MFNFEDELIIEP-GYSCLIWVQLLV-ILLIFVLCSLTIF-AIDFSKTNTTDINSTTAIAS 60
           MF+ E+ L +E      LIW+Q+L+ ILL+F+    ++F + D S   TT  N++++I+S
Sbjct: 1   MFDLEESLTVESYRIPWLIWIQILIFILLLFLFYCFSVFTSSDLSLNTTTSSNNSSSISS 60

Query: 61  ------------SSTTRFLSHTSHNGKIRIDPN--PPRNAQISNEQSIRGEITSSTSRRI 120
                       SS  +      HN       N     + QI   QSI+GEI +STSR  
Sbjct: 61  FPPPSSSSSTSASSLNKATGLNKHNSNTTTVTNLLQQHHNQIGGSQSIKGEIATSTSR-- 120

Query: 121 TQVGEGTVVGGEG-SQETKLDLHPCS 129
           T V EG V  GEG S  + +D HPC+
Sbjct: 121 TVVREGNVTEGEGFSTNSVIDFHPCN 144

[Close]

BLAST of ClCG02G013410 vs. TrEMBL
Match: Q8LDK2_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.0e-08
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1


Query: 17  LIWVQLLV-ILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTT-RFLSHT----SHN 76
           LIW+Q+LV +LL+ +LC + IF++D    + +  +S  + + SS + RFLS      SH+
Sbjct: 20  LIWIQMLVFVLLLLLLCVVGIFSLDIGDNSYSSSDSVPSTSGSSLSKRFLSGNTIPISHH 79

Query: 77  GK-IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEGSQETKLD---LHP 136
           G    ++ +  ++ Q+ + QSI+GEIT + +RR+T + E     GEGS E        HP
Sbjct: 80  GLGFSVNSSLIQSHQVGSSQSIKGEITPAVTRRVTTITE----EGEGSLEKDSSHSLHHP 139

Query: 137 CSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKK 163
           C+L     S  L      R+  + ED  R QE+ K+
Sbjct: 140 CTLFRLAGSAFLKCFGIDRSTEETEDSLR-QESKKE 170

[Close]

BLAST of ClCG02G013410 vs. TrEMBL
Match: Q9LV89_ARATH (Putative uncharacterized protein At5g64880 OS=Arabidopsis thaliana GN=At5g64880 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-08
Identity = 54/156 (34.62%), Postives = 84/156 (53.85%), Query Frame = 1


Query: 17  LIWVQLLV-ILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTT-RFLSHT----SHN 76
           LIW+Q+LV +LL+ +LC + IF+ D    + +  +S  + + SS + RFLS      SH+
Sbjct: 20  LIWIQMLVFVLLLLLLCVIGIFSFDIVDNSYSSSDSVPSTSGSSLSKRFLSGNPIPISHH 79

Query: 77  GK-IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEGSQETKLD---LHP 136
           G    ++ +  ++ Q+ + QSI+GEIT + +RR+T V E     GEGS E        HP
Sbjct: 80  GLGFSVNSSLVQSHQVGSSQSIKGEITPAVTRRVTTVTE----EGEGSLEKDSSHSLHHP 139

Query: 137 CSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKK 163
           C+L     S  L      R+  + ED  R QE+ K+
Sbjct: 140 CTLFRLAGSAFLKCFGIDRSTEETEDSLR-QESKKE 170

[Close]

BLAST of ClCG02G013410 vs. TrEMBL
Match: A0A067KGA7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09395 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 1


Query: 1   MFNFEDELIIEP-GYSCLIWVQLLVI-LLIFVLCSLTIFAIDFSKTNTTDINSTTAIASS 60
           MF+  D L IE      LIW+Q+++  LLIF++ S T F+ D S TN++   S+ ++A++
Sbjct: 1   MFDLGDNLTIETYRIPWLIWIQIIIFFLLIFLVYSFTAFSSDLSHTNSSPSPSSPSLATA 60

Query: 61  STTRFLSH--TSHNGKIRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEG 120
           STT +L+     HN    +  N  +  Q+   QSI+GEI + TS R     E     G  
Sbjct: 61  STTSYLNKEILKHNNNTTV-TNRLQLHQVGERQSIKGEIATGTSSRRIITEESREREG-F 120

Query: 121 SQETKLDLHPC 128
           S    ++ HPC
Sbjct: 121 STNAIIEFHPC 129

[Close]

BLAST of ClCG02G013410 vs. TAIR10
Match: AT5G64880.1 (AT5G64880.1 unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.7e-11
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1


Query: 17  LIWVQLLV-ILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTT-RFLSHT----SHN 76
           LIW+Q+LV +LL+ +LC + IF+ D    + +  +S  + + SS + RFLS      SH+
Sbjct: 20  LIWIQMLVFVLLLLLLCVIGIFSFDIVDNSYSSSDSVPSTSGSSLSKRFLSGNPIPISHH 79

Query: 77  GK-IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEGSQETKLD---LHP 136
           G    ++ +  ++ Q+ + QSI+GEIT + +RR+T V E     GEGS E        HP
Sbjct: 80  GLGFSVNSSLVQSHQVGSSQSIKGEITPAVTRRVTTVTE----EGEGSLEKDSSHSLHHP 139

Query: 137 CSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKK 163
           C+L     S  L      R+  + ED  R QE+ K+
Sbjct: 140 CTLFRLAGSAFLKCFGIDRSTEETEDSLR-QESKKE 170

[Close]

BLAST of ClCG02G013410 vs. NCBI nr
Match: gi|659116080|ref|XP_008457891.1| (PREDICTED: uncharacterized protein LOC103497467 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52
Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 1


Query: 1   MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSS- 60
           MFNFEDELII+PG S LIW+QLLVILL+F LC LTIFAIDFSK++T D NST AIASSS 
Sbjct: 76  MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 135

Query: 61  TTRFLSHTSHNGK-------IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVV 120
           TTRFLSH++HNGK       IRI PNPPRNAQ++N+QS RGEITSST+RRITQVGEGTV+
Sbjct: 136 TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQVANDQSTRGEITSSTNRRITQVGEGTVI 195

Query: 121 GGEGSQETKLDLHPCSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKK 163
           GGEGSQETKLDLHPCS   +L   A    L L + ++    D  Q N  +
Sbjct: 196 GGEGSQETKLDLHPCSYF-RLAKSAFLRCLGLDSSNENSISDERQRNESR 244

[Close]

BLAST of ClCG02G013410 vs. NCBI nr
Match: gi|449461423|ref|XP_004148441.1| (PREDICTED: uncharacterized protein LOC101209555 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 116/172 (67.44%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 1   MFNFEDELIIEPGYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSST 60
           MFNFEDELII+PG S LIW+QLLVILLIF LC LTIFA DFSK+NTTD NST AIASSS+
Sbjct: 1   MFNFEDELIIQPGISWLIWIQLLVILLIFFLCCLTIFAFDFSKSNTTDFNSTAAIASSSS 60

Query: 61  -TRFLSHTSHNGK-------IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVV 120
            TRFLSH++H+GK       IRI PNPPRNAQ++N+QS RGEITSSTSRRITQVGEGTV+
Sbjct: 61  PTRFLSHSTHSGKNILPNPNIRIGPNPPRNAQVTNDQSTRGEITSSTSRRITQVGEGTVI 120

Query: 121 GGEGSQETKLDLHPCS---LLNQLFSGALGWTLQLRTQSQMEDKDRSQENPK 162
           GGE SQETKLDLHPCS   L    F   LG  L   T + + D+ +  E+ K
Sbjct: 121 GGEVSQETKLDLHPCSYFRLAKSAFLRCLG--LDSSTDNSISDERQRNESRK 170

[Close]

BLAST of ClCG02G013410 vs. NCBI nr
Match: gi|1009146640|ref|XP_015890978.1| (PREDICTED: uncharacterized protein LOC107425489 [Ziziphus jujuba])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 1


Query: 1   MFNFEDELIIEP-GYSCLIWVQLLVILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSS 60
           MF+F DEL +E      LIW+Q LV+ L+ +L     F+I F  ++T +  S+TA  SSS
Sbjct: 1   MFDFGDELTVESYRVPWLIWIQALVMFLLIIL--FYCFSI-FDLSDTDNHTSSTASPSSS 60

Query: 61  TTRFLSHTSH-----NGKIRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGG 120
           + R +S+ +H     N   R   N  +  Q+   QSI+GEI++ TSRR+ + G G   GG
Sbjct: 61  SRR-VSNDAHPLSKLNTTTRFVSNRLQTTQVGESQSIKGEISAGTSRRVVRGGGGGGGGG 120

Query: 121 -------EGSQETKLDLHPCSLLN 132
                  E S    +  HPC   N
Sbjct: 121 GEDNVDRESSSGAHIRFHPCYYFN 140

[Close]

BLAST of ClCG02G013410 vs. NCBI nr
Match: gi|255575553|ref|XP_002528677.1| (PREDICTED: uncharacterized protein LOC8274922 [Ricinus communis])

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 1


Query: 1   MFNFEDELIIEP-GYSCLIWVQLLV-ILLIFVLCSLTIF-AIDFSKTNTTDINSTTAIAS 60
           MF+ E+ L +E      LIW+Q+L+ ILL+F+    ++F + D S   TT  N++++I+S
Sbjct: 1   MFDLEESLTVESYRIPWLIWIQILIFILLLFLFYCFSVFTSSDLSLNTTTSSNNSSSISS 60

Query: 61  ------------SSTTRFLSHTSHNGKIRIDPN--PPRNAQISNEQSIRGEITSSTSRRI 120
                       SS  +      HN       N     + QI   QSI+GEI +STSR  
Sbjct: 61  FPPPSSSSSTSASSLNKATGLNKHNSNTTTVTNLLQQHHNQIGGSQSIKGEIATSTSR-- 120

Query: 121 TQVGEGTVVGGEG-SQETKLDLHPCS 129
           T V EG V  GEG S  + +D HPC+
Sbjct: 121 TVVREGNVTEGEGFSTNSVIDFHPCN 144

[Close]

BLAST of ClCG02G013410 vs. NCBI nr
Match: gi|21554095|gb|AAM63176.1| (unknown [Arabidopsis thaliana])

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1


Query: 17  LIWVQLLV-ILLIFVLCSLTIFAIDFSKTNTTDINSTTAIASSSTT-RFLSHT----SHN 76
           LIW+Q+LV +LL+ +LC + IF++D    + +  +S  + + SS + RFLS      SH+
Sbjct: 20  LIWIQMLVFVLLLLLLCVVGIFSLDIGDNSYSSSDSVPSTSGSSLSKRFLSGNTIPISHH 79

Query: 77  GK-IRIDPNPPRNAQISNEQSIRGEITSSTSRRITQVGEGTVVGGEGSQETKLD---LHP 136
           G    ++ +  ++ Q+ + QSI+GEIT + +RR+T + E     GEGS E        HP
Sbjct: 80  GLGFSVNSSLIQSHQVGSSQSIKGEITPAVTRRVTTITE----EGEGSLEKDSSHSLHHP 139

Query: 137 CSLLNQLFSGALGWTLQLRTQSQMEDKDRSQENPKK 163
           C+L     S  L      R+  + ED  R QE+ K+
Sbjct: 140 CTLFRLAGSAFLKCFGIDRSTEETEDSLR-QESKKE 170

The following BLAST results are available for this feature:

BLAST of ClCG02G013410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM30_CUCSA	7.9e-52	67.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296040 PE=4 SV=1	[more]
B9SRQ8_RICCO	1.1e-08	35.62	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0666220 PE=4 SV=1	[more]
Q8LDK2_ARATH	7.0e-08	33.97	Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1	[more]
Q9LV89_ARATH	9.2e-08	34.62	Putative uncharacterized protein At5g64880 OS=Arabidopsis thaliana GN=At5g64880 ...	[more]
A0A067KGA7_JATCU	1.2e-07	35.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09395 PE=4 SV=1	[more]

BLAST of ClCG02G013410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64880.1	4.7e-11	34.62	unknown protein	[more]

BLAST of ClCG02G013410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116080\|ref\|XP_008457891.1\|	3.9e-52	67.06	PREDICTED: uncharacterized protein LOC103497467 [Cucumis melo]	[more]
gi\|449461423\|ref\|XP_004148441.1\|	1.1e-51	67.44	PREDICTED: uncharacterized protein LOC101209555 [Cucumis sativus]	[more]
gi\|1009146640\|ref\|XP_015890978.1\|	1.2e-08	36.11	PREDICTED: uncharacterized protein LOC107425489 [Ziziphus jujuba]	[more]
gi\|255575553\|ref\|XP_002528677.1\|	1.6e-08	35.62	PREDICTED: uncharacterized protein LOC8274922 [Ricinus communis]	[more]
gi\|21554095\|gb\|AAM63176.1\|	1.0e-07	33.97	unknown [Arabidopsis thaliana]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G013410.1	ClCG02G013410.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G013410	Csa2G296040	Cucumber (Chinese Long) v2	cuwcgB119
ClCG02G013410	Cla020123	Watermelon (97103) v1	wcgwmB197
ClCG02G013410	Cla97C02G039080	Watermelon (97103) v2	wcgwmbB138
ClCG02G013410	Bhi10G001857	Wax gourd	wcgwgoB284
ClCG02G013410	CSPI02G15030	Wild cucumber (PI 183967)	cpiwcgB125
ClCG02G013410	Cucsa.250480	Cucumber (Gy14) v1	cgywcgB441
ClCG02G013410	CmoCh20G011500	Cucurbita moschata (Rifu)	cmowcgB491
ClCG02G013410	CmoCh02G006090	Cucurbita moschata (Rifu)	cmowcgB550
ClCG02G013410	Lsi10G006530	Bottle gourd (USVL1VR-Ls)	lsiwcgB048
ClCG02G013410	Cp4.1LG16g00280	Cucurbita pepo (Zucchini)	cpewcgB257
ClCG02G013410	Cp4.1LG05g10710	Cucurbita pepo (Zucchini)	cpewcgB657
ClCG02G013410	Carg11673	Silver-seed gourd	carwcgB1033
ClCG02G013410	Carg27068	Silver-seed gourd	carwcgB1013
ClCG02G013410	CsaV3_2G017570	Cucumber (Chinese Long) v3	cucwcgB134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G013410	Cucumber (Gy14) v2	cgybwcgB115
ClCG02G013410	Melon (DHL92) v3.6.1	medwcgB102
ClCG02G013410	Cucurbita maxima (Rimu)	cmawcgB491
ClCG02G013410	Melon (DHL92) v3.5.1	mewcgB106