ClCG02G013160 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGAGGAACTCCCCAATCAACAAGTGAACATCTCTTTGCCTGGCCAACGAGATATCAAACTCCTGAAGGAGATCATTCTAGACAAAACTTGCAAACTAACACTCAGGTAAACTCGGTCAAGCGGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCTGGCGAAAAAGAAGTGAACACTTTTCTAAGGAAGGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTTGCTGCTACTAACGGGGTCTCAGTTGATTTCCCTTCCTTTAGGTACTCAGATGTTTTAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAAACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTTGCCTCTTCAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTAGTGACGGTACACGGAACACCAACCCAATCTCGACGCAAAAAAAAGAATTGCAACTACATCAAAAACTGAGATTCATCGACGTGAATGCACGCTTTGTCATGTTAGTGTGAGAACCTTAAATAAACTCACGATCAAGCTTTTTGATTTGTTTACTCAACTCGTAAAGGCAAACAAAAAAGGGATCCGCCTCGAACCAAAACTCTTTCTCCTTAGCACAAGCACTAAGTAAGCAAGCTACCTTTCTTTTCTACGCTACGATCTTTCTTCTCTTATGAAATTCAAAGAAGGTGATCGAAGTTTTCCTTTGCCTTTCGACAAAGCATACAACAAAGGCCCATTAACGAGAGCATCTCCTCTACTTCAATCTAAGACCTCATACTTCTGTATTTTCTCTCTCTTCTTTCATACTCTCCTAGCATTTAAAAACTACATATGAAAATCAACATTTTTTACAAAAAGAAAAAAAAATACACACCTTTTAGCATTTGTGACCGTTTTTCTTTCTCCCCCTTAATTCGGCTACTCTTGTGCCATAAAAAGTCATTTTTGTTGTAGTGATGTTTGGATAATTTCTTTTCTTAAAAAAAAAAACTTAATTGAGAATCTAATTTGATTCAAAAGTTTAGGGGTTTAGTTGATAAAATTATAAGCCTCACACGATGTTTATATCCAAACAAAATAAAATGAATGGTGCAAATTGATACACTTACAATAGTTTAGATAAATTAATACAATTATTTGTATTTGTATGATTCAAATTGATATAACTCCAAAATTTAATGTTGTAAATTGATATTTTCTATAAAATTTAGGTTGAAAAAAGGTTGATATAAATAATGAGTAAAGAAGCATAAAGTTAAAAAACAGTAAACTAAAAACAGAATCATTATTTTTGTATGAAGAAAAGGAGGAGACGAAAATATTTTATTCGTTTTACACGAGTGGGCTTAGTGTTGTGGTTAAATAATACAGCTCATAATTCCACTACCTCAAACTTTTTGGTTGCACAGTTTTTTTGAAAACCAAAATCGAGAAACATGAAAGTACTTATTAAAAGCCTCATCAAATTTGGACTCATTGAAGCACGTGATTTCACAGACAGACAGAAACAGTAAGTCAACCCTTATTCCTCTAAAGATCAATTCATATTTAAAGTGCTCTCACTTCTCTTCTATATAAAAGCTATCAAACTGAAGAGCTTCTCCATCTACTTAATTATAACATTTATTACATGGGTTTGTGGTATATTCCATCTCTTGCACACTGGACAGCCACCGCCGTGGGTGGCTGCCGCCAGCCGTAGGGAGGTGGCTGGTGTGGATGAGATGGAATACGCCATTGAACCCATGTGCTTCCGGGAGAAAAACATTAAGACAATGCAAAAACAGGGGCACAAAGGTCTTGGTTATGGATGTCTTCCTCTAAAGAAAGGTTAA ATGGGGGAGGAACTCCCCAATCAACAAGTGAACATCTCTTTGCCTGGCCAACGAGATATCAAACTCCTGAAGGAGATCATTCTAGACAAAACTTGCAAACTAACACTCAGAAGTGAACACTTTTCTAAGGAAGGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTTGCTGCTACTAACGGGGTCTCATTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAAACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTTGCCTCTTCAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTAGTGACGGTACACGGAACACCAACCCAATCTCGACGCAAAAAAAAGAATTGCAACTACATCAAAAACTGAGATTCATCGACGTGAATGCACGCTTTGTCATGTTACCACCGCCGTGGGTGGCTGCCGCCAGCCGTAGGGAGGTGGCTGGTGTGGATGAGATGGAATACGCCATTGAACCCATGTGCTTCCGGGAGAAAAACATTAAGACAATGCAAAAACAGGGGCACAAAGGTCTTGGTTATGGATGTCTTCCTCTAAAGAAAGGTTAA ATGGGGGAGGAACTCCCCAATCAACAAGTGAACATCTCTTTGCCTGGCCAACGAGATATCAAACTCCTGAAGGAGATCATTCTAGACAAAACTTGCAAACTAACACTCAGAAGTGAACACTTTTCTAAGGAAGGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTTGCTGCTACTAACGGGGTCTCATTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAAACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTTGCCTCTTCAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTAGTGACGGTACACGGAACACCAACCCAATCTCGACGCAAAAAAAAGAATTGCAACTACATCAAAAACTGAGATTCATCGACGTGAATGCACGCTTTGTCATGTTACCACCGCCGTGGGTGGCTGCCGCCAGCCGTAGGGAGGTGGCTGGTGTGGATGAGATGGAATACGCCATTGAACCCATGTGCTTCCGGGAGAAAAACATTAAGACAATGCAAAAACAGGGGCACAAAGGTCTTGGTTATGGATGTCTTCCTCTAAAGAAAGGTTAA MGEELPNQQVNISLPGQRDIKLLKEIILDKTCKLTLRSEHFSKEGSFVFVFLQTPNPLSLAATNGVSFAKFEKSKERKLATELGYGFPIGDPWITDGISPWPFASSSVLPSQCPGIHPMHSFRSCSDGTRNTNPISTQKKELQLHQKLRFIDVNARFVMLPPPWVAAASRREVAGVDEMEYAIEPMCFREKNIKTMQKQGHKGLGYGCLPLKKG
BLAST of ClCG02G013160 vs. Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31 Identity = 61/69 (88.41%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of ClCG02G013160 vs. TrEMBL
Match: M1BRB5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019855 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.9e-31 Identity = 82/156 (52.56%), Postives = 97/156 (62.18%), Query Frame = 1
BLAST of ClCG02G013160 vs. TrEMBL
Match: K4D065_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.5e-30 Identity = 81/154 (52.60%), Postives = 95/154 (61.69%), Query Frame = 1
BLAST of ClCG02G013160 vs. TrEMBL
Match: K7N1A6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28 Identity = 68/105 (64.76%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of ClCG02G013160 vs. TrEMBL
Match: Q5M9R1_TOBAC (Uncharacterized protein OS=Nicotiana tabacum GN=orf138c PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.0e-27 Identity = 64/94 (68.09%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of ClCG02G013160 vs. TrEMBL
Match: A0A161X3X2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024277 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.2e-27 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 1
BLAST of ClCG02G013160 vs. TAIR10
Match: ATMG00030.1 (ATMG00030.1 hypothetical protein) HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32 Identity = 61/69 (88.41%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of ClCG02G013160 vs. NCBI nr
Match: gi|13449292|ref|NP_085475.1| (hypothetical protein ArthMp003 [Arabidopsis thaliana]) HSP 1 Score: 136.0 bits (341), Expect = 7.9e-29 Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of ClCG02G013160 vs. NCBI nr
Match: gi|57013900|ref|YP_173374.1| (hypothetical protein NitaMp027 [Nicotiana tabacum]) HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27 Identity = 64/94 (68.09%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of ClCG02G013160 vs. NCBI nr
Match: gi|1021021973|gb|KZM80319.1| (hypothetical protein DCAR_031801 [Daucus carota subsp. sativus]) HSP 1 Score: 129.4 bits (324), Expect = 7.4e-27 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 1
BLAST of ClCG02G013160 vs. NCBI nr
Match: gi|302143234|emb|CBI20529.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 123.6 bits (309), Expect = 4.1e-25 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of ClCG02G013160 vs. NCBI nr
Match: gi|734393345|gb|KHN28130.1| (Putative mitochondrial protein [Glycine soja]) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |