ClCG02G013120 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGTAAGCAAAGCTATTCTTTTTGTGATTATTTGTCTTCTCGCTCTTTCCATTTTGACTCTAAAATGTGGATTTTCTTTATTTTTTATGTTAATTAGGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGTTTCTTGTTTGAGGTTTGATGTTGAAGCATTAAATAATGTCTATTCTATTACTACCATTTTTAACAAACAAATTTAAGTTTCATTTTAATATTTGAGCTATTAGATTAGATTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATAAATGCAAATAGTAATCAATTTCAAAGTCTTTGCAGATATTGGACAAGGTAAAAAAAATTGCAAATACAGTATATTTTAAATTTTGCTATCTTTGCAATTTTTTTAAAAATTATTTTCCCTAAAAATGATACTCAATACAATTATCCTATTTTTTTTTTGTTCTTAAACTTTCGAATTTTTAGTAATTTAATCAATATACTACTTCAAAGAAATAACCATTTTAAGTTCTTTTAGTCTTCAACATGTTTAAATTATAACCCCTTAAATTCTTAAACTTAGGGATGTAAGCAAAATTGTGAATGGACATACTCAAATAACTTATAAACCAGCTTCTTAAAATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATCACTTTATTTTCAAATGTACCAATTAACAACGCTCAATTTTTTTTTTTTCTAAAAAAAAAACCCTAGATTTCAAAGTTGGCAAAGTTAAGTTTGGCGCCATAGAACTGATGAACAATGAGAGGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTGTAAGCAAATCAACTACCTTATATTTTTCCATGAAGCATATTTTTCACTTGTTTTGTTTTTGGTCAAAAGTAGCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA MLKFLKEELPVMPSSSHRPNDLVCKAWDNPHFFKVVLADALREQKLEIPRKFVREYGVKALLNDQICLKVADGKEWNLGLTKSNNGRRVWLHNGWQNFVEFYSVKLGYFLVFKYQIQCSSFYVLIFDLTATEIEYPMNKIRLDDAEKKVKMETSLIDLDQVSYSQGMNLSSMTSRRARAMAKATAFQSMTLNPSFMCKMSPSHIHPGKCLHVPRSFVEMHLEEATDIILQVSDGRFWGARCGFYLGKRMRKRAELIGGWRKFRLDNNLKVGDFCVFEMISKSSRRICFKVEIFRAS
BLAST of ClCG02G013120 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.3e-17 Identity = 47/130 (36.15%), Postives = 78/130 (60.00%), Query Frame = 1
HSP 2 Score: 63.9 bits (154), Expect = 3.3e-09 Identity = 40/121 (33.06%), Postives = 58/121 (47.93%), Query Frame = 1
BLAST of ClCG02G013120 vs. Swiss-Prot
Match: Y3160_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.0e-15 Identity = 77/271 (28.41%), Postives = 124/271 (45.76%), Query Frame = 1
BLAST of ClCG02G013120 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14 Identity = 39/118 (33.05%), Postives = 76/118 (64.41%), Query Frame = 1
BLAST of ClCG02G013120 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13 Identity = 40/118 (33.90%), Postives = 72/118 (61.02%), Query Frame = 1
BLAST of ClCG02G013120 vs. Swiss-Prot
Match: Y3123_ORYSJ (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os03g0212300 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-13 Identity = 67/258 (25.97%), Postives = 113/258 (43.80%), Query Frame = 1
BLAST of ClCG02G013120 vs. TrEMBL
Match: A0A0A0LJV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.3e-80 Identity = 160/265 (60.38%), Postives = 189/265 (71.32%), Query Frame = 1
BLAST of ClCG02G013120 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40 Identity = 112/270 (41.48%), Postives = 162/270 (60.00%), Query Frame = 1
BLAST of ClCG02G013120 vs. TrEMBL
Match: A0A067L932_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40 Identity = 117/318 (36.79%), Postives = 170/318 (53.46%), Query Frame = 1
BLAST of ClCG02G013120 vs. TrEMBL
Match: A0A067LCJ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01468 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.0e-36 Identity = 106/297 (35.69%), Postives = 151/297 (50.84%), Query Frame = 1
BLAST of ClCG02G013120 vs. TrEMBL
Match: A0A0D2TIU7_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G209200 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.5e-36 Identity = 95/266 (35.71%), Postives = 150/266 (56.39%), Query Frame = 1
BLAST of ClCG02G013120 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18 Identity = 47/130 (36.15%), Postives = 78/130 (60.00%), Query Frame = 1
HSP 2 Score: 63.9 bits (154), Expect = 1.9e-10 Identity = 40/121 (33.06%), Postives = 58/121 (47.93%), Query Frame = 1
BLAST of ClCG02G013120 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15 Identity = 39/118 (33.05%), Postives = 76/118 (64.41%), Query Frame = 1
BLAST of ClCG02G013120 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 79.0 bits (193), Expect = 5.6e-15 Identity = 40/118 (33.90%), Postives = 72/118 (61.02%), Query Frame = 1
BLAST of ClCG02G013120 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1
BLAST of ClCG02G013120 vs. TAIR10
Match: AT4G31690.1 (AT4G31690.1 Transcriptional factor B3 family protein) HSP 1 Score: 65.1 bits (157), Expect = 8.4e-11 Identity = 66/257 (25.68%), Postives = 114/257 (44.36%), Query Frame = 1
BLAST of ClCG02G013120 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo]) HSP 1 Score: 384.4 bits (986), Expect = 1.8e-103 Identity = 203/300 (67.67%), Postives = 238/300 (79.33%), Query Frame = 1
BLAST of ClCG02G013120 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo]) HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31 Identity = 92/260 (35.38%), Postives = 141/260 (54.23%), Query Frame = 1
HSP 2 Score: 337.8 bits (865), Expect = 1.9e-89 Identity = 179/303 (59.08%), Postives = 214/303 (70.63%), Query Frame = 1
BLAST of ClCG02G013120 vs. NCBI nr
Match: gi|700206924|gb|KGN62043.1| (hypothetical protein Csa_2G292240 [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 4.7e-80 Identity = 160/265 (60.38%), Postives = 189/265 (71.32%), Query Frame = 1
BLAST of ClCG02G013120 vs. NCBI nr
Match: gi|449460668|ref|XP_004148067.1| (PREDICTED: B3 domain-containing protein REM8-like [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 5.2e-63 Identity = 148/274 (54.01%), Postives = 170/274 (62.04%), Query Frame = 1
BLAST of ClCG02G013120 vs. NCBI nr
Match: gi|629093291|gb|KCW59286.1| (hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis]) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 112/270 (41.48%), Postives = 162/270 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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