ClCG02G012770 (gene) Watermelon (Charleston Gray)

NameClCG02G012770
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 26448842 .. 26449329 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTTGCTCACACTCGCCTTCCTATGTTTGATTAGGGATGAGGTGTTCGGTGCTGAAGGGGTATGTTCATTTCTAATGTTTTTTTAGTGATTACAATATTTTTTTTTTTAACTTATGGATAATATTATGTTTTATAGGCATTTATTACGTCGAAGCTTGTGGCAACAGAGGAGGAGATGAAGTTCATGGTTCGCATTATGTTGCCATCAAAAGCACCGATCTTACCACCGGTACCCTTATTACCACCAGCACCATAGAATGATCTCGAGCCTTCGACAAGTCACGCTAATGACGATGTTGATGCAAACGAGGATGGAGAAAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGATGTTAAAAAAAATAATAATAATCAAAGATGTCAGTAGAAAAGTTAAGGCCTAGGTTGAGGCCCTTAATCACCGTGTTGGAGGCCTCGAGAAGGACTTAAAAGCAATGAAGAAATATTTGCGCCGAATGTCTAAG

mRNA sequence

ATGGTCTTGCTCACACTCGCCTTCCTATGTTTGATTAGGGATGAGGTGTTCGGTGCTGAAGGGGCATTTATTACGTCGAAGCTTGTGGCAACAGAGGAGGAGATGAAGTTCATGGTTCGCATTATGTTGCCATCAAAAGCACCGATCTTACCACCGAATGATCTCGAGCCTTCGACAAGTCACGCTAATGACGATGTTGATGCAAACGAGGATGGAGAAAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGATGTTAAAAAAAATAATAATAATCAAAGATGTCAGTAGAAAAGTTGAGGCCCTTAATCACCGTGTTGGAGGCCTCGAGAAGGACTTAAAAGCAATGAAGAAATATTTGCGCCGAATGTCTAAG

Coding sequence (CDS)

ATGGTCTTGCTCACACTCGCCTTCCTATGTTTGATTAGGGATGAGGTGTTCGGTGCTGAAGGGGCATTTATTACGTCGAAGCTTGTGGCAACAGAGGAGGAGATGAAGTTCATGGTTCGCATTATGTTGCCATCAAAAGCACCGATCTTACCACCGAATGATCTCGAGCCTTCGACAAGTCACGCTAATGACGATGTTGATGCAAACGAGGATGGAGAAAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGATGTTAAAAAAAATAATAATAATCAAAGATGTCAGTAGAAAAGTTGAGGCCCTTAATCACCGTGTTGGAGGCCTCGAGAAGGACTTAAAAGCAATGAAGAAATATTTGCGCCGAATGTCTAAG

Protein sequence

MVLLTLAFLCLIRDEVFGAEGAFITSKLVATEEEMKFMVRIMLPSKAPILPPNDLEPSTSHANDDVDANEDGERRKRRRKKKKMLKKIIIIKDVSRKVEALNHRVGGLEKDLKAMKKYLRRMSK
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G012770.1ClCG02G012770.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 91..111
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G012770Silver-seed gourdcarwcgB1029
ClCG02G012770Silver-seed gourdcarwcgB1031
ClCG02G012770Cucumber (Chinese Long) v3cucwcgB134
ClCG02G012770Cucumber (Chinese Long) v3cucwcgB477
ClCG02G012770Watermelon (97103) v2wcgwmbB132
ClCG02G012770Watermelon (97103) v2wcgwmbB138
ClCG02G012770Wax gourdwcgwgoB284
ClCG02G012770Wax gourdwcgwgoB296
ClCG02G012770Wax gourdwcgwgoB304
ClCG02G012770Watermelon (Charleston Gray)wcgwcgB089
ClCG02G012770Cucumber (Gy14) v1cgywcgB136
ClCG02G012770Cucumber (Gy14) v1cgywcgB629
ClCG02G012770Cucurbita maxima (Rimu)cmawcgB533
ClCG02G012770Cucurbita maxima (Rimu)cmawcgB550
ClCG02G012770Cucurbita maxima (Rimu)cmawcgB755
ClCG02G012770Cucurbita moschata (Rifu)cmowcgB578
ClCG02G012770Cucurbita moschata (Rifu)cmowcgB532
ClCG02G012770Cucurbita moschata (Rifu)cmowcgB547
ClCG02G012770Cucurbita moschata (Rifu)cmowcgB756
ClCG02G012770Wild cucumber (PI 183967)cpiwcgB125
ClCG02G012770Wild cucumber (PI 183967)cpiwcgB476
ClCG02G012770Cucumber (Chinese Long) v2cuwcgB119
ClCG02G012770Melon (DHL92) v3.5.1mewcgB093
ClCG02G012770Melon (DHL92) v3.5.1mewcgB106
ClCG02G012770Watermelon (97103) v1wcgwmB197
ClCG02G012770Cucurbita pepo (Zucchini)cpewcgB429
ClCG02G012770Cucurbita pepo (Zucchini)cpewcgB653
ClCG02G012770Cucurbita pepo (Zucchini)cpewcgB666
ClCG02G012770Bottle gourd (USVL1VR-Ls)lsiwcgB045
ClCG02G012770Bottle gourd (USVL1VR-Ls)lsiwcgB129
ClCG02G012770Cucumber (Gy14) v2cgybwcgB115
ClCG02G012770Cucumber (Gy14) v2cgybwcgB418
ClCG02G012770Melon (DHL92) v3.6.1medwcgB090
ClCG02G012770Melon (DHL92) v3.6.1medwcgB102