ClCG02G011030 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G011030
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 22813217 .. 22813787 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGAGACAATACATAAGAAAATCATGCGTACTCCTTTTGATAAATTTCTTTTCCTTAAAGATGAAACTGCAAGTTATTTAAGGCGATTTTGGACATTCATGGTGACAACCTTCATCCTCTAAAAAAACTCGTGGATTAATATTTTCGAAAGGTAGAGAAGTATAACCAATACCAATCATAATTTTCTTCCCAATTAACTCTAGCAAATAAAAGTTGGCAACTAGAGGAAGCCAAGTTTAGCTTAGAGAAGGTACTATATGGTGAAAGCAGTACACTTGCCAAGAAGAATACACTTTTGGAGTGTGTTGCAGAGGCATCCGGGAAGAGGAAGAATTGACAACCAAGCTAGAAGCTGTTAAAACTACACGAATTGAGATGTCCAAGCTGATTTTTGAGACTGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAGTGCGGGAGACTACAAGTAATATTGAAAGCATTTCTGCTCTTAGTGATAAAGACACTAAAGCTTTGAAGGTACTTTACAAAATGTTAGAGGCAACGCAAGAGGAACTGGAGAACTACAAATGGTTGCCATGA

mRNA sequence

ATGTGGGAGACAATACATAAGAAAATCATGCGTACTCCTTTTGATAAATTTCTTTTCCTTAAAGATGAAACTGCAACAAATAAAAGTTGGCAACTAGAGGAAGCCAAGTTTAGCTTAGAGAAGGTACTATATGGTGAAAGCAGTACACTTGCCAAGAAGAATACACTTTTGGAAGGCATCCGGGAAGAGGAAGAATTGACAACCAAGCTAGAAGCTGTTAAAACTACACGAATTGAGATGTCCAAGCTGATTTTTGAGACTGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAGTGCGGGAGACTACAAGTAATATTGAAAGCATTTCTGCTCTTAGTGATAAAGACACTAAAGCTTTGAAGGTACTTTACAAAATGTTAGAGGCAACGCAAGAGGAACTGGAGAACTACAAATGGTTGCCATGA

Coding sequence (CDS)

ATGTGGGAGACAATACATAAGAAAATCATGCGTACTCCTTTTGATAAATTTCTTTTCCTTAAAGATGAAACTGCAACAAATAAAAGTTGGCAACTAGAGGAAGCCAAGTTTAGCTTAGAGAAGGTACTATATGGTGAAAGCAGTACACTTGCCAAGAAGAATACACTTTTGGAAGGCATCCGGGAAGAGGAAGAATTGACAACCAAGCTAGAAGCTGTTAAAACTACACGAATTGAGATGTCCAAGCTGATTTTTGAGACTGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAGTGCGGGAGACTACAAGTAATATTGAAAGCATTTCTGCTCTTAGTGATAAAGACACTAAAGCTTTGAAGGTACTTTACAAAATGTTAGAGGCAACGCAAGAGGAACTGGAGAACTACAAATGGTTGCCATGA

Protein sequence

MWETIHKKIMRTPFDKFLFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKWLP
Homology
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BLAST of ClCG02G011030 vs. NCBI nr
Match: gi|778665095|ref|XP_011648484.1| (PREDICTED: uncharacterized protein LOC105434487 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 1 

Query: 1   MWETIHKKIMRTPFDKFLFLK-------DETATNKSWQL-------EEAKFSLEKVLYGE 60
           +WE + +KI+RTPF++   L+       D  AT+ +  L        EAK  ++ +   E
Sbjct: 563 LWENLRQKIIRTPFERLSSLEPEMHKIFDAIATSDNNNLIVLTELFTEAKGFVKTLRVDE 622

Query: 61  SSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLNQHKLEASKVRETTSN 120
           +  LA+ NT    +        KLEA    +++M           QH  E SK  E    
Sbjct: 623 NRILAETNTAKRRLTRLSAKEAKLEA----KLKMK----------QH--EISKTCEEIDK 682

Query: 121 IESISALSDKDTKALKVLYKMLEATQEELENYKWLP 143
           +E  S + D D K L  L + LE+T EEL+N+KW P
Sbjct: 683 LECASIVGDIDAKMLSTLRESLESTLEELKNFKWTP 702

The following BLAST results are available for this feature:
BLAST of ClCG02G011030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778665095|ref|XP_011648484.1|1.7e-0631.41PREDICTED: uncharacterized protein LOC105434487 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G011030.1ClCG02G011030.1mRNA