ClCG02G010530 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G010530
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr02 : 20645278 .. 20645778 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATAGTGTTCAATAGTCTATTAGTCCACCACATTCTGCTCAGGGAGGTACATGACCAGAATAGTAATGTTGAGTCCATGTACTTCAACCTTAGTGGACATACAGTCAAGTTCTCCAAGGACGAATTCCTATTAGTGACTGGGATTTGGAGGTCACTAGTGATAGTTCCTCGCACTGCTGAAGTGACTAGTGCACTTAGGACGAAGTATTTCCACAACCTACGTGGGACAGAGATCCACCTAATCGCCTTTGAGGAGCATTACAAGGGGCTATAGTTTGGGACTAACCTAGATGCGATGAAGGTTAGTCTTATATGCATGTACGAGCTTGGGTTGAGTGGAAAGGATAAGACGAAGAGCAACATCAATAAGTTGTTGCTCGATGATGTGGAGCACTTGGATTTCTTCAATAGTCGGGATTGGGGTGAAATTATATGGGAGCAAACTTTCAGCGGCCTTCAGAAGGCCTTGAGGGACAAGGTTTCCGCGTACAAGTAG

mRNA sequence

ATGGATATAGTGTTCAATAGTCTATTAGTCCACCACATTCTGCTCAGGGAGGTACATGACCAGAATAGTAATGTTGAGTCCATGTACTTCAACCTTAGTGGACATACAGTCAAGTTCTCCAAGGACGAATTCCTATTAGTGACTGGGATTTGGAGGTCACTAGTGATAGTTCCTCGCACTGCTGAAGTGACTAGTGCACTTAGGACGAAGTATTTCCACAACCTACGTGGGACAGAGATCCACCTAATCGCCTTTGAGGAGCATTACAAGGGGCTATATCTTATATGCATGTACGAGCTTGGGTTGAGTGGAAAGGATAAGACGAAGAGCAACATCAATAAGTTGTTGCTCGATGATGTGGAGCACTTGGATTTCTTCAATAGTCGGGATTGGGGTGAAATTATATGGGAGCAAACTTTCAGCGGCCTTCAGAAGGCCTTGAGGGACAAGGTTTCCGCGTACAAGTAG

Coding sequence (CDS)

ATGGATATAGTGTTCAATAGTCTATTAGTCCACCACATTCTGCTCAGGGAGGTACATGACCAGAATAGTAATGTTGAGTCCATGTACTTCAACCTTAGTGGACATACAGTCAAGTTCTCCAAGGACGAATTCCTATTAGTGACTGGGATTTGGAGGTCACTAGTGATAGTTCCTCGCACTGCTGAAGTGACTAGTGCACTTAGGACGAAGTATTTCCACAACCTACGTGGGACAGAGATCCACCTAATCGCCTTTGAGGAGCATTACAAGGGGCTATATCTTATATGCATGTACGAGCTTGGGTTGAGTGGAAAGGATAAGACGAAGAGCAACATCAATAAGTTGTTGCTCGATGATGTGGAGCACTTGGATTTCTTCAATAGTCGGGATTGGGGTGAAATTATATGGGAGCAAACTTTCAGCGGCCTTCAGAAGGCCTTGAGGGACAAGGTTTCCGCGTACAAGTAG

Protein sequence

MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRTAEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLYLICMYELGLSGKDKTKSNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK

Homology

[Close]

BLAST of ClCG02G010530 vs. TrEMBL
Match: A0A0A0KM59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.1e-34
Identity = 84/166 (50.60%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S       
Sbjct: 54  MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPR 113

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E T +L TKYF N    +++ + FEE YK L            L+   EL + GKD+TK
Sbjct: 114 VEATKSLGTKYFGNELVVDMNPLTFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 173

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 174 SIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDMYK 217

[Close]

BLAST of ClCG02G010530 vs. TrEMBL
Match: Q5GIS9_CUCME (Ulp1 peptidase-like OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-09
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           ++IVFN  L+H++LLREV D+    +S+ F L G    F + EF +VTG+W      P+ 
Sbjct: 61  LNIVFNGPLIHYLLLREVEDEGK--DSISFLLGGVVCTFGRREFNIVTGLWG-----PKE 120

Query: 61  AEV----TSALRTKYF--------HNLRGTEIHLIAFEEHYKGLYLICMYELGLSGKD-K 120
             +     S L  K+F         +L    +     ++    L L+   E+ L GKD +
Sbjct: 121 DYIQLGGNSRLLEKFFKDKDCVYVSDLEDIFLEYEGDDDDIVKLALVYFIEISLLGKDRR 180

Query: 121 TKSNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKAL 148
           TK +I  L + D    + FN+ DWG I++ +T S L++AL
Sbjct: 181 TKVDIGFLKIAD--DWNSFNNYDWGRIVFVRTLSALKRAL 211

[Close]

BLAST of ClCG02G010530 vs. TrEMBL
Match: A0A067DK70_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036576mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-09
Identity = 48/165 (29.09%), Postives = 80/165 (48.48%), Query Frame = 1


Query: 5   FNSLLVHHILLREV-HDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRTAEV 64
           F+ ++VH+ILLR+V H   ++   ++F +  H +  S  E+ LVTG+     +V    + 
Sbjct: 3   FSGIIVHNILLRQVSHGVGNDKNELWFQVGDHLIWPSIREWCLVTGLCYGEDVVLMKHKT 62

Query: 65  TSALRTKYFHNLRGTEIHLIAFEEHYKGLY-------------LICMYELGLSGKDKTKS 124
              L  KYF  +   EI+L  FE+ +  L              L    +  ++G+ K   
Sbjct: 63  IHRLLKKYFVGMF-REINLGQFEQRFMDLNFRAMDDTKALKIALFSFVDRAINGR-KDHC 122

Query: 125 NINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
            IN  LL++V+ ++ F SR WG + WE  +  L  AL  K + +K
Sbjct: 123 QINFNLLNEVDDINHFRSRPWGRLSWETIYESLDNALNGKANKFK 165

[Close]

BLAST of ClCG02G010530 vs. TrEMBL
Match: A0A067D2S2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039185mg PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-08
Identity = 43/164 (26.22%), Postives = 81/164 (49.39%), Query Frame = 1


Query: 5   FNSLLVHHILLREV-HDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRTAEV 64
           F+ +++H++LLR+V H+++S  + ++F +S H +  S  E+ LVTG+   +    R  + 
Sbjct: 67  FSGVILHNLLLRQVAHEEDSREDQLWFQISEHLILLSIVEWCLVTGLSYGVDTELRNNQT 126

Query: 65  TSALRTKYFHNLRGTEIHLIAFEEHYKGLYLICMYELG------------LSGKDKTKSN 124
              LR  YF  +   +I+L  F+  +K L    M ++             +    K    
Sbjct: 127 VRRLRNTYFGGVH-RKINLKEFDALFKKLKFEAMDDMDALNIALFYFSDRVINARKNHYQ 186

Query: 125 INKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           IN   L++++ + +F +R WG + WE  +  L  AL +K   +K
Sbjct: 187 INFDWLNEIDDIQYFRNRPWGLLSWEIIYESLDDALFEKDQKFK 229

[Close]

BLAST of ClCG02G010530 vs. TrEMBL
Match: A0A067D544_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035656mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-08
Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = 1


Query: 5   FNSLLVHHILLREV-HDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRTAEV 64
           F+ +++H++LLR+V H+++S  + ++F +  H ++ S  E+ LVTG+   +    +  E+
Sbjct: 67  FSGVILHNLLLRQVAHEEDSREDQLWFQIDEHLIRLSIVEWCLVTGLSFGVDTNKKNDEM 126

Query: 65  TSALRTKYFHNLRGTEIHLIAFEEHYKGLYL------------ICMYELGLSGKDKTKSN 124
              LR  YF  +   +I++  F+  +K L              +  +   +    K    
Sbjct: 127 EQRLRNTYFGGVH-RKINVNQFDAVFKELKFEEIDDMDALKIALFYFTDRVLNARKNHCQ 186

Query: 125 INKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           IN   LD V+ + +F  R WG + WE  +  L  AL +K   +K
Sbjct: 187 INFDWLDQVDDIQYFRKRPWGLLSWEMIYESLDNALFEKDEKFK 229

[Close]

BLAST of ClCG02G010530 vs. NCBI nr
Match: gi|659074247|ref|XP_008437501.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S     R 
Sbjct: 135 MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRR 194

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E + +L TKYF N    +++ I FEE YK L            L+   EL + GKD+TK
Sbjct: 195 VEASKSLGTKYFGNELVVDMNPITFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 254

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 255 SIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDMYK 298

[Close]

BLAST of ClCG02G010530 vs. NCBI nr
Match: gi|659074245|ref|XP_008437500.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S     R 
Sbjct: 137 MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKSVRR 196

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E + +L TKYF N    +++ I FEE YK L            L+   EL + GKD+TK
Sbjct: 197 VEASKSLGTKYFGNELVVDMNPITFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 256

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 257 SIINKSLLDDVEDLKYYNSLDWGHILWERTLRGLQNALKNKVDMYK 300

[Close]

BLAST of ClCG02G010530 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.9e-34
Identity = 84/166 (50.60%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S       
Sbjct: 135 MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPR 194

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E T +L TKYF N    +++ + FEE YK L            L+   EL + GKD+TK
Sbjct: 195 VEATKSLGTKYFGNELVVDMNPLTFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 254

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 255 SIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDMYK 298

[Close]

BLAST of ClCG02G010530 vs. NCBI nr
Match: gi|700194767|gb|KGN49944.1| (hypothetical protein Csa_5G141180 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.9e-34
Identity = 84/166 (50.60%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S       
Sbjct: 54  MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPR 113

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E T +L TKYF N    +++ + FEE YK L            L+   EL + GKD+TK
Sbjct: 114 VEATKSLGTKYFGNELVVDMNPLTFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 173

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 174 SIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDMYK 217

[Close]

BLAST of ClCG02G010530 vs. NCBI nr
Match: gi|778699090|ref|XP_011654656.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.9e-34
Identity = 84/166 (50.60%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MDIVFNSLLVHHILLREVHDQNSNVESMYFNLSGHTVKFSKDEFLLVTGIWRSLVIVPRT 60
           MD+VF+S LVHHILLREV D+    ++M FNL+G    FSK+EFLLVTG+W S       
Sbjct: 137 MDLVFSSPLVHHILLREVKDERP--DAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPR 196

Query: 61  AEVTSALRTKYFHNLRGTEIHLIAFEEHYKGLY-----------LICMYELGLSGKDKTK 120
            E T +L TKYF N    +++ + FEE YK L            L+   EL + GKD+TK
Sbjct: 197 VEATKSLGTKYFGNELVVDMNPLTFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTK 256

Query: 121 SNINKLLLDDVEHLDFFNSRDWGEIIWEQTFSGLQKALRDKVSAYK 156
           S INK LLDDVE L ++NS DWG I+WE+T  GLQ AL++KV  YK
Sbjct: 257 SIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDMYK 300

The following BLAST results are available for this feature:

BLAST of ClCG02G010530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM59_CUCSA	4.1e-34	50.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141180 PE=4 SV=1	[more]
Q5GIS9_CUCME	7.9e-09	32.50	Ulp1 peptidase-like OS=Cucumis melo PE=4 SV=1	[more]
A0A067DK70_CITSI	7.9e-09	29.09	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036576mg PE=4 S...	[more]
A0A067D2S2_CITSI	3.9e-08	26.22	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039185mg PE=4 SV=1	[more]
A0A067D544_CITSI	5.1e-08	25.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035656mg PE=4 SV=1	[more]

BLAST of ClCG02G010530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074247\|ref\|XP_008437501.1\|	1.6e-34	51.20	PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]	[more]
gi\|659074245\|ref\|XP_008437500.1\|	1.6e-34	51.20	PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]	[more]
gi\|778699094\|ref\|XP_011654657.1\|	5.9e-34	50.60	PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]	[more]
gi\|700194767\|gb\|KGN49944.1\|	5.9e-34	50.60	hypothetical protein Csa_5G141180 [Cucumis sativus]	[more]
gi\|778699090\|ref\|XP_011654656.1\|	5.9e-34	50.60	PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G010530.1	ClCG02G010530.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G010530	Bottle gourd (USVL1VR-Ls)	lsiwcgB052
ClCG02G010530	Cucumber (Gy14) v2	cgybwcgB420
ClCG02G010530	Melon (DHL92) v3.6.1	medwcgB108
ClCG02G010530	Silver-seed gourd	carwcgB0341
ClCG02G010530	Cucumber (Chinese Long) v3	cucwcgB478
ClCG02G010530	Watermelon (97103) v2	wcgwmbB138
ClCG02G010530	Wax gourd	wcgwgoB287
ClCG02G010530	Cucumber (Gy14) v1	cgywcgB183
ClCG02G010530	Cucurbita maxima (Rimu)	cmawcgB495
ClCG02G010530	Cucurbita moschata (Rifu)	cmowcgB496
ClCG02G010530	Wild cucumber (PI 183967)	cpiwcgB479
ClCG02G010530	Cucumber (Chinese Long) v2	cuwcgB457
ClCG02G010530	Melon (DHL92) v3.5.1	mewcgB112
ClCG02G010530	Watermelon (97103) v1	wcgwmB171
ClCG02G010530	Cucurbita pepo (Zucchini)	cpewcgB260