ClCG02G010460 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G010460
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	AT4g35320/F23E12_120
Location	CG_Chr02 : 20017924 .. 20018400 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGTCGTCCACACCTTCCACAAAACTCGCTCTTTCCTCCCCTCCAGGCCTCTCCCCGACGCCCTCCCTCTCTCCCACACCGACTCCGCCGCCGACCAAACCCTCCGCCGCCGCCTCTCTTCTCTCTCCCTCCGAATCCAGCCTATCTCCTCCCCTGCAACCGCATGGGCAATCCGAAAATCCAAGTCCATGTCCTCAATCGGAGATCTCGCCGGCAGCTCCGTCAGAAAGTGGTGGGAGTGGGGCTGGGCTTGGATCCTCTCTCGCAAACCCATCTTCGCCAAGGATCTCGAAATGAACGAAGAAGAATCCAAAATCCTCGGATCTCAAAACAGAGGTAGTTGGAGACACGTCTTCTTCAAGTTCAGATCTGAAATCAGAAAGCTCATCGGCTCCGATGTTGGCCTCCCTCAAACAACCTGCAAGTACCCATCCTTCAATTTCCCCAACAATGGCGGAATCAGAACCTAA

mRNA sequence

ATGTCCTCCGTCGTCCACACCTTCCACAAAACTCGCTCTTTCCTCCCCTCCAGGCCTCTCCCCGACGCCCTCCCTCTCTCCCACACCGACTCCGCCGCCGACCAAACCCTCCGCCGCCGCCTCTCTTCTCTCTCCCTCCGAATCCAGCCTATCTCCTCCCCTGCAACCGCATGGGCAATCCGAAAATCCAAGTCCATGTCCTCAATCGGAGATCTCGCCGGCAGCTCCGTCAGAAAGTGGTGGGAGTGGGGCTGGGCTTGGATCCTCTCTCGCAAACCCATCTTCGCCAAGGATCTCGAAATGAACGAAGAAGAATCCAAAATCCTCGGATCTCAAAACAGAGGTAGTTGGAGACACGTCTTCTTCAAGTTCAGATCTGAAATCAGAAAGCTCATCGGCTCCGATGTTGGCCTCCCTCAAACAACCTGCAAGTACCCATCCTTCAATTTCCCCAACAATGGCGGAATCAGAACCTAA

Coding sequence (CDS)

ATGTCCTCCGTCGTCCACACCTTCCACAAAACTCGCTCTTTCCTCCCCTCCAGGCCTCTCCCCGACGCCCTCCCTCTCTCCCACACCGACTCCGCCGCCGACCAAACCCTCCGCCGCCGCCTCTCTTCTCTCTCCCTCCGAATCCAGCCTATCTCCTCCCCTGCAACCGCATGGGCAATCCGAAAATCCAAGTCCATGTCCTCAATCGGAGATCTCGCCGGCAGCTCCGTCAGAAAGTGGTGGGAGTGGGGCTGGGCTTGGATCCTCTCTCGCAAACCCATCTTCGCCAAGGATCTCGAAATGAACGAAGAAGAATCCAAAATCCTCGGATCTCAAAACAGAGGTAGTTGGAGACACGTCTTCTTCAAGTTCAGATCTGAAATCAGAAAGCTCATCGGCTCCGATGTTGGCCTCCCTCAAACAACCTGCAAGTACCCATCCTTCAATTTCCCCAACAATGGCGGAATCAGAACCTAA

Protein sequence

MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAIRKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHVFFKFRSEIRKLIGSDVGLPQTTCKYPSFNFPNNGGIRT

Homology

[Close]

BLAST of ClCG02G010460 vs. TrEMBL
Match: A0A0A0KE14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117780 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSRPLPDALPLSHTDS +DQTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
           RKSKSMSS GDLAGSSVRKWW+WGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSW+HV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVGLPQTTCKYPSFNFP-NNGGIRT 159
           FFKFRSEIRKLIGSDV LPQTT  Y SFNFP NN GIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of ClCG02G010460 vs. TrEMBL
Match: A0A067LHY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10745 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-47
Identity = 95/155 (61.29%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSS++ +F K  + LP   +         D + DQ LRRRLSSLSL+IQPI+SPA +WA 
Sbjct: 1   MSSIIQSFQKRANSLPVSQI--------CDDSKDQGLRRRLSSLSLKIQPIASPAASWAF 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
           R+SKS+SS+G+ AG+S+RKWW+WGW+WILSRKPIFAKDLEMNEEE++ILG  N+GSWRHV
Sbjct: 61  RRSKSVSSMGEYAGTSIRKWWDWGWSWILSRKPIFAKDLEMNEEETRILGCHNKGSWRHV 120

Query: 121 FFKFRSEIRKLIGSD--VGLPQTTCKYPSFNFPNN 154
           F+K RSEIRK++ S+  VGLPQ TC+Y SF++  N
Sbjct: 121 FYKVRSEIRKIVRSENKVGLPQ-TCRYDSFSYSKN 146

[Close]

BLAST of ClCG02G010460 vs. TrEMBL
Match: A0A061E1J1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007583 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-45
Identity = 92/155 (59.35%), Postives = 120/155 (77.42%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQT-LRRRLSSLSLRIQPISSPATAWA 60
           MSS++ +F K+           ALP+S T+S      LRRRLSS+SL I+PISSPAT+WA
Sbjct: 1   MSSIIQSFQKSH----------ALPVSQTESKEQLPGLRRRLSSVSLNIKPISSPATSWA 60

Query: 61  IRKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRH 120
             +SKS+SS+G+ AG S+RKWW+WGW+W+LSRKP+FAKDLEMNEEE++ILG  N+GSWRH
Sbjct: 61  FHRSKSLSSMGEYAGGSIRKWWDWGWSWVLSRKPMFAKDLEMNEEETRILGCHNKGSWRH 120

Query: 121 VFFKFRSEIRKLIGSD-VGLPQTTCKYPSFNFPNN 154
           VF+K RSE++KL+GSD VGLPQ T +Y S ++  N
Sbjct: 121 VFYKVRSEVKKLVGSDKVGLPQ-TYRYNSLDYSKN 144

[Close]

BLAST of ClCG02G010460 vs. TrEMBL
Match: A0A0D2SLE5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G216400 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44
Identity = 93/161 (57.76%), Postives = 119/161 (73.91%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDS-------AADQTLRRRLSSLSLRIQPISS 60
           MSS++ +F K  S          LP+S T+S       A    LRRRLSSLSL++QP SS
Sbjct: 1   MSSIIQSFQKNSS----------LPVSQTESKDHFPPPAGPGLLRRRLSSLSLKLQPTSS 60

Query: 61  PATAWAIRKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQN 120
           PAT+W   +SKS+SS+G+ AGSS+RKWW+WGW+W+LS+KP FAKD+EMNEEE++ILG  N
Sbjct: 61  PATSWTFPRSKSLSSMGEYAGSSIRKWWDWGWSWVLSKKPSFAKDIEMNEEETRILGCHN 120

Query: 121 RGSWRHVFFKFRSEIRKLIGSD-VGLPQTTCKYPSFNFPNN 154
           +GSWRHVF+K RSEIRKL+GSD VGLPQ T +Y S ++  N
Sbjct: 121 KGSWRHVFYKVRSEIRKLVGSDKVGLPQ-TYRYNSLDYSKN 150

[Close]

BLAST of ClCG02G010460 vs. TrEMBL
Match: W9QTX6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013730 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.9e-44
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQ--TLRRRLSSLSLRIQPISS-PATA 60
           MSS+V TF K R FLP              S  DQ  ++RRRLSSLSL++QPISS PA +
Sbjct: 1   MSSIVQTFQK-RDFLPVS--------QDASSPKDQQPSIRRRLSSLSLKLQPISSSPAAS 60

Query: 61  WAIRKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSW 120
           WA R+SKS+S++G+ AGSS+RKWW+ GW WILSRKP+FA+DLEMNEEE+K LGS +RGSW
Sbjct: 61  WAFRRSKSVSAMGESAGSSIRKWWDCGWGWILSRKPMFAEDLEMNEEETKALGSHSRGSW 120

Query: 121 RHVFFKFRSEIRKLIGSD-VGLPQTTCKYPSFNFPNN 154
           RHVF+K RSE+RKL+ SD VGLPQ TC+Y SFN+  N
Sbjct: 121 RHVFYKVRSELRKLVRSDRVGLPQ-TCRYDSFNYSKN 147

[Close]

BLAST of ClCG02G010460 vs. TAIR10
Match: AT4G35320.1 (AT4G35320.1 unknown protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31
Identity = 71/133 (53.38%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 21  PDALPLSHTDSAADQT------LRRRLSSLSLRIQPISSPATAWAIRKSKSMSSIGDLAG 80
           P +LP+S   +AA         +RRRLSSLSL +      A A    +SKS+S++G+ AG
Sbjct: 13  PTSLPVSQRPNAAATADDEPGLIRRRLSSLSLNLSN-QPAAIAARFPRSKSVSAMGEQAG 72

Query: 81  SSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHVFFKFRSEIRKLIG- 140
           SSV++WWEWGW+WILSRKPIF +DLE+N++E+K +GSQNRGS  HVFFK RS+IR  +G 
Sbjct: 73  SSVKEWWEWGWSWILSRKPIFIRDLELNKDEAKSIGSQNRGSIMHVFFKLRSQIRNFMGP 132

Query: 141 -SDVGLPQTTCKY 146
            S+  LP  +CKY
Sbjct: 133 SSEDSLP-LSCKY 143

[Close]

BLAST of ClCG02G010460 vs. TAIR10
Match: AT2G17300.1 (AT2G17300.1 unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 1


Query: 21  PDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAIRKSKSMSSIGDLAGSSVRKW 80
           P +LP+S T +     LRRRLSSLSL +   + P+T   + +SKS+S +G+  GSSV++W
Sbjct: 14  PTSLPISSTTTDEPGLLRRRLSSLSLNLSR-NQPST---VSRSKSVSDMGEQGGSSVKEW 73

Query: 81  WEWGWAWILSRK-PIFAKDLEMNEEESK-ILGSQNRGSWRHVFFKFRSEIRKLIGSDVGL 140
           WEW W+WIL +K PIF  DLE+N+ E+K  LG+Q RGS+ HVFFK RSEIR+L+      
Sbjct: 74  WEWSWSWILLKKLPIFFTDLEVNKNETKSSLGNQQRGSFIHVFFKLRSEIRRLLRPSSDS 133

Query: 141 PQTTCKY 146
              +CK+
Sbjct: 134 LPLSCKH 136

[Close]

BLAST of ClCG02G010460 vs. NCBI nr
Match: gi|449467872|ref|XP_004151646.1| (PREDICTED: uncharacterized protein LOC101213314 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-77
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTF KTRSFLPSRPLPDALPLSHTDS +DQTLRRRLSSLSLRIQPISSPATAWAI
Sbjct: 1   MSSVVHTFTKTRSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAI 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
           RKSKSMSS GDLAGSSVRKWW+WGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSW+HV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVGLPQTTCKYPSFNFP-NNGGIRT 159
           FFKFRSEIRKLIGSDV LPQTT  Y SFNFP NN GIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of ClCG02G010460 vs. NCBI nr
Match: gi|659094635|ref|XP_008448164.1| (PREDICTED: uncharacterized protein LOC103490448 [Cucumis melo])

HSP 1 Score: 295.0 bits (754), Expect = 7.6e-77
Identity = 145/159 (91.19%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSSVVHTFHKTRSFLPSR LPDALPLSHTDS +DQTLRRRLSSLSLRIQPISSPATAWA 
Sbjct: 1   MSSVVHTFHKTRSFLPSRTLPDALPLSHTDSPSDQTLRRRLSSLSLRIQPISSPATAWAF 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
           RKSKSMSS GDLAGSSVRKWW+WGWAWILSRKPIFAKDLEMNEEESKI+GSQNRGSW+HV
Sbjct: 61  RKSKSMSSFGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKIIGSQNRGSWKHV 120

Query: 121 FFKFRSEIRKLIGSDVGLPQTTCKYPSFNFP-NNGGIRT 159
           FFKFRSEIRKLIGSDV LPQTT  Y SFNFP NN GIRT
Sbjct: 121 FFKFRSEIRKLIGSDVALPQTTPNYRSFNFPNNNSGIRT 159

[Close]

BLAST of ClCG02G010460 vs. NCBI nr
Match: gi|802536524|ref|XP_012074076.1| (PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas])

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 95/155 (61.29%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSS++ +F K  + LP   +         D + DQ LRRRLSSLSL+IQPI+SPA +WA 
Sbjct: 1   MSSIIQSFQKRANSLPVSQI--------CDDSKDQGLRRRLSSLSLKIQPIASPAASWAF 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
           R+SKS+SS+G+ AG+S+RKWW+WGW+WILSRKPIFAKDLEMNEEE++ILG  N+GSWRHV
Sbjct: 61  RRSKSVSSMGEYAGTSIRKWWDWGWSWILSRKPIFAKDLEMNEEETRILGCHNKGSWRHV 120

Query: 121 FFKFRSEIRKLIGSD--VGLPQTTCKYPSFNFPNN 154
           F+K RSEIRK++ S+  VGLPQ TC+Y SF++  N
Sbjct: 121 FYKVRSEIRKIVRSENKVGLPQ-TCRYDSFSYSKN 146

[Close]

BLAST of ClCG02G010460 vs. NCBI nr
Match: gi|1009141847|ref|XP_015888405.1| (PREDICTED: uncharacterized protein LOC107423372 [Ziziphus jujuba])

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 105/165 (63.64%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPL---PD-ALPLSHT--DSAADQT--LRRRLSSLSLRIQPIS 60
           MSS+V +F K RSFLP+ P    P+ +LP+S +  D + DQ   +RRRLSSLSL+IQPIS
Sbjct: 1   MSSIVQSFQK-RSFLPTMPTLTNPNGSLPVSQSKQDPSEDQNQGIRRRLSSLSLKIQPIS 60

Query: 61  S---PATAWAIRKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKIL 120
           S   P  +WA R+SKS+SS+G+ AGSS+RKWW+WGW+WILSRKPIFA+DLEMNEEE+K+L
Sbjct: 61  SSSSPVASWAFRRSKSVSSMGEYAGSSIRKWWDWGWSWILSRKPIFAQDLEMNEEETKLL 120

Query: 121 GSQNRGSWRHVFFKFRSEIRKLIGSD-VGLPQTTCKYPSFNFPNN 154
           GS NRGSWRHVF+K RSE+RK + SD V LPQ TC+Y SFN+  N
Sbjct: 121 GSHNRGSWRHVFYKVRSELRKFVRSDRVDLPQ-TCRYESFNYSKN 163

[Close]

BLAST of ClCG02G010460 vs. NCBI nr
Match: gi|720032935|ref|XP_010266269.1| (PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera])

HSP 1 Score: 190.3 bits (482), Expect = 2.6e-45
Identity = 90/154 (58.44%), Postives = 115/154 (74.68%), Query Frame = 1


Query: 1   MSSVVHTFHKTRSFLPSRPLPDALPLSHTDSAADQTLRRRLSSLSLRIQPISSPATAWAI 60
           MSS+     K RSF P      +LP+S      +  LRRRLSS+SLRI PIS+PAT+W  
Sbjct: 1   MSSIFDNIQKKRSFFPCLHTNQSLPVSQAAGTNEHGLRRRLSSISLRIPPISTPATSWTF 60

Query: 61  RKSKSMSSIGDLAGSSVRKWWEWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWRHV 120
            +SKSMS+IG+ AG+S+RKWW+WGW WILSRKP+FAKD+EMNEEE+ ILG  ++GSWRHV
Sbjct: 61  PRSKSMSAIGESAGNSIRKWWDWGWGWILSRKPVFAKDMEMNEEETAILGCHSKGSWRHV 120

Query: 121 FFKFRSEIRKLIGSD-VGLPQTTCKYPSFNFPNN 154
           F+K RSE R+L+G D VGLPQ T +Y S+++  N
Sbjct: 121 FYKVRSEFRRLVGYDNVGLPQ-TYRYDSYSYSKN 153

The following BLAST results are available for this feature:

BLAST of ClCG02G010460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE14_CUCSA	1.8e-77	92.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117780 PE=4 SV=1	[more]
A0A067LHY9_JATCU	1.1e-47	61.29	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10745 PE=4 SV=1	[more]
A0A061E1J1_THECC	6.9e-45	59.35	Uncharacterized protein OS=Theobroma cacao GN=TCM_007583 PE=4 SV=1	[more]
A0A0D2SLE5_GOSRA	4.5e-44	57.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G216400 PE=4 SV=1	[more]
W9QTX6_9ROSA	5.9e-44	62.42	Uncharacterized protein OS=Morus notabilis GN=L484_013730 PE=4 SV=1	[more]

BLAST of ClCG02G010460 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35320.1	1.8e-31	53.38	unknown protein	[more]
AT2G17300.1	1.3e-26	49.61	unknown protein	[more]

BLAST of ClCG02G010460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467872\|ref\|XP_004151646.1\|	2.6e-77	92.45	PREDICTED: uncharacterized protein LOC101213314 [Cucumis sativus]	[more]
gi\|659094635\|ref\|XP_008448164.1\|	7.6e-77	91.19	PREDICTED: uncharacterized protein LOC103490448 [Cucumis melo]	[more]
gi\|802536524\|ref\|XP_012074076.1\|	1.6e-47	61.29	PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]	[more]
gi\|1009141847\|ref\|XP_015888405.1\|	1.6e-47	63.64	PREDICTED: uncharacterized protein LOC107423372 [Ziziphus jujuba]	[more]
gi\|720032935\|ref\|XP_010266269.1\|	2.6e-45	58.44	PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G010460.1	ClCG02G010460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35714	FAMILY NOT NAMED	coord: 2..153 score: 6.3
None	No IPR available	PANTHER	PTHR35714:SF1	SUBFAMILY NOT NAMED	coord: 2..153 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G010460	Csa6G117780	Cucumber (Chinese Long) v2	cuwcgB457
ClCG02G010460	MELO3C013487	Melon (DHL92) v3.5.1	mewcgB112
ClCG02G010460	Cla97C02G036400	Watermelon (97103) v2	wcgwmbB138
ClCG02G010460	CSPI06G09610	Wild cucumber (PI 183967)	cpiwcgB479
ClCG02G010460	CmaCh20G007100	Cucurbita maxima (Rimu)	cmawcgB495
ClCG02G010460	CmoCh20G007050	Cucurbita moschata (Rifu)	cmowcgB496
ClCG02G010460	CsGy6G009690	Cucumber (Gy14) v2	cgybwcgB420
ClCG02G010460	MELO3C013487.2	Melon (DHL92) v3.6.1	medwcgB108
ClCG02G010460	Carg16130	Silver-seed gourd	carwcgB0341
ClCG02G010460	CsaV3_6G010060	Cucumber (Chinese Long) v3	cucwcgB478

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G010460	Wax gourd	wcgwgoB287
ClCG02G010460	Cucumber (Gy14) v1	cgywcgB183
ClCG02G010460	Watermelon (97103) v1	wcgwmB171
ClCG02G010460	Cucurbita pepo (Zucchini)	cpewcgB260