ClCG02G010050 (gene) Watermelon (Charleston Gray)

NameClCG02G010050
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEnvelope-like protein
LocationCG_Chr02 : 16951106 .. 16952143 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTTGGGAAAGAAAAAGTGGAAGTGCTGACTGTGGTTGCAAAAAAAAGGCATTCAGGCTTTGGTTTCGTCTCTAAAGACAAAGTGGAGTCCCGTGTAAGTCTTCCTGACCTTACCTTAACTGATTTGGTAGGACCGAGGAAAGAGATCTTTCCATCAAAGCACAAGTCGACTTCGAGTGAGTCTTCAGATCACTCCAATGAGTTAATTGTCTCTCAGGAGAACCCTAGTAAACATATTAGTTCTCACGCTTCTGGGTCCAACCAAAATAGGATTGAAGTAACTAAATGTCACATTGATAAAAACTTGTTACCTGAAAACGTGCGCCCTGAATTCATCCACTCTGAAACTGTGGTTACTGAGAATGTGCCGTCGAAAAATCCATCTAAGTCCGCTAAAGGTATGTCCAATGTTTGCTCTCACAAAAATTTCAATGAAAACCTTGTTACTGTGCCTAATGTTATCACCGAAAGTAATGTTGAGAATGTACGTTCCACTACTGAAAATGTGAAGAATCCTATCTCTGTTCCCCCCAAGTCGAATGCTGATAGTGGCGTGAAGCGAAGTAAGTCTACTTGTATTGATCCTCAAGTTAGTCTTGTGAGTAATCCGTCTCCTGTATGTGGTACTCATGATGAGCAAGAAACTACTCCAAAGGTTGCCTTTAGGTCTTCAAGTACTAAGTTAGAGAAAATGTCGTTTGATGAAGATGATGAGTGTGGTTTGTTGAGTTGTTCTGAAGAAGAAACTCTTGTCACCACCAGAGTAACAAGAAGCTCTTCCAAACGGAGAACCAAGACTGCATCCGTGAGCAATGTGGCTGATGTTCCTTTGGATGAGGTCTCCTTTCACTTTGAAAAGGGTGCTAGTCTTTGGAAATATGTGGTGAAACGCAAAATTGTTAATGAAAAGGAACTATCTCAAAACACCCAAGAGTGTTTAGACCTTATGGATCTTTTGCTGGAAGCTCAACAGATAAAATTGTACTATGATTGGGTCCCTTCTACCCGCAATTGGTTCATGAATTTATTGTGA

mRNA sequence

ATGCCCTTTGGGAAAGAAAAAGTGGAAGTGCTGACTGTGGTTGCAAAAAAAAGGCATTCAGGCTTTGGTTTCGTCTCTAAAGACAAAGTGGAGTCCCGTGTAAGTCTTCCTGACCTTACCTTAACTGATTTGGTAGGACCGAGGAAAGAGATCTTTCCATCAAAGCACAAGTCGACTTCGAGTGAGTCTTCAGATCACTCCAATGAGTTAATTGTCTCTCAGGAGAACCCTAGTAAACATATTAGTTCTCACGCTTCTGGGTCCAACCAAAATAGGATTGAAGTAACTAAATGTCACATTGATAAAAACTTGTTACCTGAAAACGTGCGCCCTGAATTCATCCACTCTGAAACTGTGGTTACTGAGAATGTGCCGTCGAAAAATCCATCTAAGTCCGCTAAAGGTATGTCCAATGTTTGCTCTCACAAAAATTTCAATGAAAACCTTGTTACTGTGCCTAATGTTATCACCGAAAGTAATGTTGAGAATGTACGTTCCACTACTGAAAATGTGAAGAATCCTATCTCTGTTCCCCCCAAGTCGAATGCTGATAGTGGCGTGAAGCGAAGTAAGTCTACTTGTATTGATCCTCAAGTTAGTCTTGTGAGTAATCCGTCTCCTGTATGTGGTACTCATGATGAGCAAGAAACTACTCCAAAGGTTGCCTTTAGGTCTTCAAGTACTAAGTTAGAGAAAATGTCGTTTGATGAAGATGATGAGTGTGGTTTGTTGAGTTGTTCTGAAGAAGAAACTCTTGTCACCACCAGAGTAACAAGAAGCTCTTCCAAACGGAGAACCAAGACTGCATCCGTGAGCAATGTGGCTGATGTTCCTTTGGATGAGGTCTCCTTTCACTTTGAAAAGGGTGCTAGTCTTTGGAAATATGTGGTGAAACGCAAAATTGTTAATGAAAAGGAACTATCTCAAAACACCCAAGAGTGTTTAGACCTTATGGATCTTTTGCTGGAAGCTCAACAGATAAAATTGTACTATGATTGGGTCCCTTCTACCCGCAATTGGTTCATGAATTTATTGTGA

Coding sequence (CDS)

ATGCCCTTTGGGAAAGAAAAAGTGGAAGTGCTGACTGTGGTTGCAAAAAAAAGGCATTCAGGCTTTGGTTTCGTCTCTAAAGACAAAGTGGAGTCCCGTGTAAGTCTTCCTGACCTTACCTTAACTGATTTGGTAGGACCGAGGAAAGAGATCTTTCCATCAAAGCACAAGTCGACTTCGAGTGAGTCTTCAGATCACTCCAATGAGTTAATTGTCTCTCAGGAGAACCCTAGTAAACATATTAGTTCTCACGCTTCTGGGTCCAACCAAAATAGGATTGAAGTAACTAAATGTCACATTGATAAAAACTTGTTACCTGAAAACGTGCGCCCTGAATTCATCCACTCTGAAACTGTGGTTACTGAGAATGTGCCGTCGAAAAATCCATCTAAGTCCGCTAAAGGTATGTCCAATGTTTGCTCTCACAAAAATTTCAATGAAAACCTTGTTACTGTGCCTAATGTTATCACCGAAAGTAATGTTGAGAATGTACGTTCCACTACTGAAAATGTGAAGAATCCTATCTCTGTTCCCCCCAAGTCGAATGCTGATAGTGGCGTGAAGCGAAGTAAGTCTACTTGTATTGATCCTCAAGTTAGTCTTGTGAGTAATCCGTCTCCTGTATGTGGTACTCATGATGAGCAAGAAACTACTCCAAAGGTTGCCTTTAGGTCTTCAAGTACTAAGTTAGAGAAAATGTCGTTTGATGAAGATGATGAGTGTGGTTTGTTGAGTTGTTCTGAAGAAGAAACTCTTGTCACCACCAGAGTAACAAGAAGCTCTTCCAAACGGAGAACCAAGACTGCATCCGTGAGCAATGTGGCTGATGTTCCTTTGGATGAGGTCTCCTTTCACTTTGAAAAGGGTGCTAGTCTTTGGAAATATGTGGTGAAACGCAAAATTGTTAATGAAAAGGAACTATCTCAAAACACCCAAGAGTGTTTAGACCTTATGGATCTTTTGCTGGAAGCTCAACAGATAAAATTGTACTATGATTGGGTCCCTTCTACCCGCAATTGGTTCATGAATTTATTGTGA

Protein sequence

MPFGKEKVEVLTVVAKKRHSGFGFVSKDKVESRVSLPDLTLTDLVGPRKEIFPSKHKSTSSESSDHSNELIVSQENPSKHISSHASGSNQNRIEVTKCHIDKNLLPENVRPEFIHSETVVTENVPSKNPSKSAKGMSNVCSHKNFNENLVTVPNVITESNVENVRSTTENVKNPISVPPKSNADSGVKRSKSTCIDPQVSLVSNPSPVCGTHDEQETTPKVAFRSSSTKLEKMSFDEDDECGLLSCSEEETLVTTRVTRSSSKRRTKTASVSNVADVPLDEVSFHFEKGASLWKYVVKRKIVNEKELSQNTQECLDLMDLLLEAQQIKLYYDWVPSTRNWFMNLL
BLAST of ClCG02G010050 vs. NCBI nr
Match: gi|659112449|ref|XP_008456227.1| (PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 6.6e-09
Identity = 56/202 (27.72%), Postives = 86/202 (42.57%), Query Frame = 1

Query: 147 ENLVTVPNVITESNVENVRSTTENVKNP-ISVPPKSNADSGVKRSKSTCIDPQVSLVSNP 206
           + ++  P+V   S      S+TE V  P +S+ P SN   G     S C  P VSL   P
Sbjct: 25  DEILVAPSVSAHSQES---SSTEGVFFPTLSIAPASNVQPG----SSVCSPPSVSLAFAP 84

Query: 207 SPVC----------------GTHDEQETTPKVAFRSSSTKLEKMSFDEDDECGLLSCSEE 266
             V                 G  D Q    +V   + +   +++  + DD   +   S E
Sbjct: 85  DDVHAYVLDNVPSDVSTTSEGQTDVQSNENEVDPSNPAVCADEVPTNADDSLAVPPSSSE 144

Query: 267 ETLVTTRVTRSSSK-RRTKTASVS------NVADVPLDEVSFHFEKGASLWKYVVKRKIV 325
             +    V R S + RR KT  +       N+  VP+D + FH E+    WK+VV+R + 
Sbjct: 145 VPVALKPVKRKSQQNRRNKTTKIGRKKVPPNIPSVPIDGILFHHEENVQCWKFVVQRWLA 204

BLAST of ClCG02G010050 vs. NCBI nr
Match: gi|659120594|ref|XP_008460264.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 61/259 (23.55%), Postives = 111/259 (42.86%), Query Frame = 1

Query: 101 DKNLLPENVRPEFIH--SETVVTENVPSKNPSKSAKGMSNVCSHKNFNENLVT------V 160
           +K+LL E+V PE +    E+ +  +  +  P   A  +SN+ S    +  L        +
Sbjct: 51  EKSLLHESVLPESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMI 110

Query: 161 PNVITESNVE-------NVRSTTENVKNPI-SVPPKSNADSGVKRSKSTCIDPQVSLV-- 220
           P+V  + +V+          S+T+ V  P   +P  SN   G          P  S V  
Sbjct: 111 PDVADKLHVDPPSFIHSQESSSTKGVFIPTPDIPSTSNVQPGPSAHSPPASPPLFSSVNA 170

Query: 221 --SNPSPVCGT--------HDEQETTPKVAFRSSSTKLEKMSFDEDDECGLLSCSEEETL 280
             S P  V G          +++E   +V  +      E++  ++D+   +   S +   
Sbjct: 171 HKSVPDAVLGNISGAPVRHPNDREVEDEVEPQHPDIGTEEVPLNDDNNLVVPPASADIPA 230

Query: 281 VTTRVTRSSSKRR----TKTASVS---NVADVPLDEVSFHFEKGASLWKYVVKRKIVNEK 325
            +    + + ++R    TKT       N+  +P+D +SFH E+    WK+V++R+I +E 
Sbjct: 231 ASNPAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEV 290

BLAST of ClCG02G010050 vs. NCBI nr
Match: gi|659114605|ref|XP_008457140.1| (PREDICTED: uncharacterized protein LOC103496886 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 3.1e-06
Identity = 79/335 (23.58%), Postives = 132/335 (39.40%), Query Frame = 1

Query: 53  PSKHKSTSSESSDHSNELIVSQENPSKHISSHASGSNQNRIE--VTKCHIDKNLLPENVR 112
           P+  KST+S          +S ++P K +    S    + +       H++++  P +  
Sbjct: 30  PTASKSTTSSKGKRYKG--ISTKHPYKKVRKSISSGEYSTVPSPAHSSHVERSANPPS-- 89

Query: 113 PEFIHSETVVTENVPSKNPSKSAKGMSNVCSHKNFNENLVTV----------PNVITESN 172
           P  +  E +   +  S  PS S+  +S + S      ++ TV           NVI  + 
Sbjct: 90  PVTVKEEVLEFSSPQSARPSVSSS-VSKLPSRPEPRVSVETVVLDFNSSDSDDNVILSTL 149

Query: 173 VENVRSTTENVK------------NPISVPPKSNADSGVKRSKSTCIDPQVSLVSNPSPV 232
           +   RST  N              +P   PP+ +  +    + S+   P+          
Sbjct: 150 LHRTRSTRSNQTTSLIKPQASGGVSPKVAPPRPSEHTKYSGTPSSQASPKTVPPGEADDE 209

Query: 233 CGTHDEQETTP------KVAFRSSSTKLEKMSFDED-------DECGLLSC-------SE 292
               D+++  P      K    S+ST+ +  S  +D       +E G  S        SE
Sbjct: 210 DDDSDDEDYAPGTEEKTKAETTSTSTENQSASPKKDPSDHRSTEESGESSIPRSTEGPSE 269

Query: 293 EETLVTT--RVTRSSSKRRTKTASVS-------------NVADVPLDEVSFHFEKGASLW 329
             TLV+T   V  SSS R   T                 NV+ +P+D VSFH E+GA  W
Sbjct: 270 FSTLVSTPAHVASSSSFRGPPTKGQRVVSTKDGRRKVPPNVSSIPIDGVSFHSEEGAHKW 329

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659112449|ref|XP_008456227.1|6.6e-0927.72PREDICTED: uncharacterized protein LOC103496232 [Cucumis melo][more]
gi|659120594|ref|XP_008460264.1|1.4e-0623.55PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like [Cucumis melo... [more]
gi|659114605|ref|XP_008457140.1|3.1e-0623.58PREDICTED: uncharacterized protein LOC103496886 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G010050.1ClCG02G010050.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G010050Cla001597Watermelon (97103) v1wcgwmB213
ClCG02G010050Cla97C02G036180Watermelon (97103) v2wcgwmbB138
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None