ClCG02G010000 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G010000
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPhosphoglycerate mutase family protein
LocationCG_Chr02 : 16680483 .. 16683181 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTCGTAGCCCAGTAAAATTCAGTCCCCTTCTTTTCCAGAGGGAATCGAAAACTTCGGTTTTGGAGGATTCGTTCTTTCAATTCGCCGAATCAGAGTTCTCCAAATGCGACGGTGGGTTGAAGAAGATATCTGAATGCATACTTCTCTACGGGCGCTTCTTTTTTACTGAATCTTAACAACCAATTAAACCTTGCCACGTTACTATCATTGACTTGGTACTCTGACCAATGTAAATGTGGAAGCTTCTCATTGGCTAATGTAGAAGAACGTCCAAAATAATGTACTAAACTTCAGGAAGGGATTAAAAATACGGAAGAGAAGCAAAGAGGGGGAGTCCAGGGAATGGCAACGGCGTCGTTTTTGCGGAACAGATACTGGATTCTCAGGCACGGCAAGAGCATCCCAAATGAGAAGGGCCTCATTGTTTCCTCAATAGTCAGTGACTGTAACCCATTTTTTACTTTCTATTTGACCTGTTGTTTTATTCTTCGTCTGTTGTTTGGATTGTAAGAAATGCCGTTTTTTCTGGGTTCTTGTCTGAATTCGATATGACTGTGAAGAATTTTTCTCAGGATCCAAAGTTTTCGATTGTTCTGAAAATGGGTTTCGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGGGTAGGGGGTGTTTAAGAGGTATTTGAAAATTCTCTGACGGCTGCTTCTGTGGTTGAGGATTGCTTTACTGCTTCTCTTTTGTTCTTCTTCTCATTTCCACTGAAGTATGTTTCGGAAATGAATTGGGCTGTTCGGAAATACTGATTTTAGGCTTCAAATTGTGGTGAGTTTTTGCACTCTTCTGCTTGAATGTCTATTTGTTAAGGGTATGTGTTTGTGATATGACATGTTTTTGGAGGTTTTGCTTGTCAGTTGATTGAGATGAAGAGTGAAGAACAGGTTATTGACTGAGAGTTTGATTCTGCTGTAGGAAAATGGTATCCTTCCGGAGTATCAACTGGCTCCAGAGGGTGTTGGACAAGCGCATTTGGCTGGAGAACAGTTCTTAAAGGTGAACTATTTTAGTCCTTAATCCATGTTTCTTCAGGCTGTGCTTGTGTAGTAATAGTCCTTAGAGTGTGCAAATGACTGATTATACAAAGTATGGTTTGTGTAACCTGTATTTGCAGTATTTTTGGGATGTTAATTGATGCCTTATTCACTAAGCCCGGCTCGAATTAACAAATATAGTTTTGGTTTTCCACTTCTAATCTAGGCTACACAAATCCAATTCATGAGCCTTGGTTTTTCTTCCCCAGAGTAAAAACGTGATACTCTTCTTCAGTTTGTGAATATTGATGTCAATATGTCTGGTAATAATATATTTTACAGATCAATCAACCATAGTTCTTAGAAACTATCTTAAAAACAAAAACAAGAAACTGCTGTAAACAGTGTGGCTTCACTGAATTTTTGCTTTCAAGGAATGAAAGGAAATTTGTATATTTACATGCTGAAGAATTGAGATGCGTTGGTTTAATTTGTTTAATCTTTATATAACTGCAATAGATTAGTTTATTGTTCTTTACAGAAAGTATATATTCATACCACAGAAAGTAAACTAAAAAACCATTCTGGAAAAGCTAATTAACCCAATCCTACGAAAACTTATCCGATCAAATTTAATGATGTGACTTGTTTATACTTTATGAACTATCATCTTGGTGATCAATGTTGATCGACAATCTAATCGTATCTTAGTCAATTCCATTCAGTCTTTTTGTCATTCTTGATCACTCATGATATGGAAAATAATTGTTGATTATTTGAGGATTATTTTCCTTTTTGTTAATATTTTATCTTTGTATTTATTGTAAAGATATTTACTATATTTATCTCCTTCCTTATTTGTAATAGGTTTTCTTTTATATAAGAAAACCCTTGTTTAACAAAGAATGTAGAGAGAAATAAAATATTTCAGCATGGTATCAGAGCCTACCGTTGAAACCCTAATTTTTTCTAAAAAAGAAAAAGAAACCCTAATCTAACCTAATCTGCCGCCGCCAACACCCCAGACATTCGTGGACACCTCACCTGAGTTACCGGACAACTCCCAGCACCGGTCGTCCGTGGATCCTGTCGTTCGTGAAGTCTAG

mRNA sequence

ATGGCGATTCGTAGCCCAGTAAAATTCAGTCCCCTTCTTTTCCAGAGGGAATCGAAAACTTCGGTTTTGGAGGATTCGTTCTTTCAATTCGCCGAATCAGAGTTCTCCAAATGCGACGGGATTAAAAATACGGAAGAGAAGCAAAGAGGGGGAGTCCAGGGAATGGCAACGGCGTCGTTTTTGCGGAACAGATACTGGATTCTCAGGCACGGCAAGAGCATCCCAAATGAGAAGGGCCTCATTGTTTCCTCAATAGTCAGTGACTGATTGCTTTACTGCTTCTCTTTTGTTCTTCTTCTCATTTCCACTGAAGAAAATGGTATCCTTCCGGAGTATCAACTGGCTCCAGAGGGTGTTGGACAAGCGCATTTGGCTGGAGAACAGTTCTTAAAGACATTCGTGGACACCTCACCTGAGTTACCGGACAACTCCCAGCACCGGTCGTCCGTGGATCCTGTCGTTCGTGAAGTCTAG

Coding sequence (CDS)

ATGGCGATTCGTAGCCCAGTAAAATTCAGTCCCCTTCTTTTCCAGAGGGAATCGAAAACTTCGGTTTTGGAGGATTCGTTCTTTCAATTCGCCGAATCAGAGTTCTCCAAATGCGACGGGATTAAAAATACGGAAGAGAAGCAAAGAGGGGGAGTCCAGGGAATGGCAACGGCGTCGTTTTTGCGGAACAGATACTGGATTCTCAGGCACGGCAAGAGCATCCCAAATGAGAAGGGCCTCATTGTTTCCTCAATAGTCAGTGACTGA

Protein sequence

MAIRSPVKFSPLLFQRESKTSVLEDSFFQFAESEFSKCDGIKNTEEKQRGGVQGMATASFLRNRYWILRHGKSIPNEKGLIVSSIVSD
Homology
[Close]
BLAST of ClCG02G010000 vs. TrEMBL
Match: A0A0A0KQV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265820 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.9e-10
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 46 EKQRG-GVQGMATASFLRNRYWILRHGKSIPNEKGLIVSS 85
          E +RG  VQGMATASFLRNRYWILRHGKSIPNEKGLIVSS
Sbjct: 25 EAERGVQVQGMATASFLRNRYWILRHGKSIPNEKGLIVSS 64

[Close]
BLAST of ClCG02G010000 vs. TrEMBL
Match: A0A0B0MNP0_GOSAR (Agropine synthesis reductase OS=Gossypium arboreum GN=F383_26703 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYWILRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWILRHGKSIPNEKGLIVSSL 31

[Close]
BLAST of ClCG02G010000 vs. TrEMBL
Match: A0A0D2R804_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYW+LRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWVLRHGKSIPNEKGLIVSSL 31

[Close]
BLAST of ClCG02G010000 vs. TrEMBL
Match: A0A0D2TVV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYW+LRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWVLRHGKSIPNEKGLIVSSL 31

[Close]
BLAST of ClCG02G010000 vs. TrEMBL
Match: A0A0D2STQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYW+LRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWVLRHGKSIPNEKGLIVSSL 31

[Close]
BLAST of ClCG02G010000 vs. TAIR10
Match: AT4G38370.1 (AT4G38370.1 Phosphoglycerate mutase family protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 

Query: 63 NRYWILRHGKSIPNEKGLIVSSI 86
          NRYW+LRHGKSIPNE+GL+VSS+
Sbjct: 10 NRYWVLRHGKSIPNERGLVVSSM 32

[Close]
BLAST of ClCG02G010000 vs. NCBI nr
Match: gi|659120509|ref|XP_008460226.1| (PREDICTED: uncharacterized protein LOC103499109 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-11
Identity = 40/46 (86.96%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 41 IKNTEEKQRGGV-QGMATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          I NT E QRG   QGMATASFLRNRYWILRHGKSIPNEKGLIVSSI
Sbjct: 4  ITNTGEAQRGVQDQGMATASFLRNRYWILRHGKSIPNEKGLIVSSI 49

[Close]
BLAST of ClCG02G010000 vs. NCBI nr
Match: gi|700195625|gb|KGN50802.1| (hypothetical protein Csa_5G265820 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 9.9e-10
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 46 EKQRG-GVQGMATASFLRNRYWILRHGKSIPNEKGLIVSS 85
          E +RG  VQGMATASFLRNRYWILRHGKSIPNEKGLIVSS
Sbjct: 25 EAERGVQVQGMATASFLRNRYWILRHGKSIPNEKGLIVSS 64

[Close]
BLAST of ClCG02G010000 vs. NCBI nr
Match: gi|449445284|ref|XP_004140403.1| (PREDICTED: uncharacterized protein LOC101220672 isoform X1 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSS 85
          MATASFLRNRYWILRHGKSIPNEKGLIVSS
Sbjct: 1  MATASFLRNRYWILRHGKSIPNEKGLIVSS 30

[Close]
BLAST of ClCG02G010000 vs. NCBI nr
Match: gi|728820354|gb|KHG03718.1| (Agropine synthesis reductase [Gossypium arboreum])

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYWILRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWILRHGKSIPNEKGLIVSSL 31

[Close]
BLAST of ClCG02G010000 vs. NCBI nr
Match: gi|763780392|gb|KJB47463.1| (hypothetical protein B456_008G040700 [Gossypium raimondii])

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 

Query: 55 MATASFLRNRYWILRHGKSIPNEKGLIVSSI 86
          MAT+SFLRNRYW+LRHGKSIPNEKGLIVSS+
Sbjct: 1  MATSSFLRNRYWVLRHGKSIPNEKGLIVSSL 31

The following BLAST results are available for this feature:
BLAST of ClCG02G010000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQV4_CUCSA6.9e-1090.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265820 PE=4 SV=1[more]
A0A0B0MNP0_GOSAR1.1e-0793.55Agropine synthesis reductase OS=Gossypium arboreum GN=F383_26703 PE=4 SV=1[more]
A0A0D2R804_GOSRA1.4e-0790.32Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1[more]
A0A0D2TVV5_GOSRA1.4e-0790.32Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1[more]
A0A0D2STQ2_GOSRA1.4e-0790.32Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1[more]
BLAST of ClCG02G010000 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38370.12.4e-0682.61 Phosphoglycerate mutase family protein[more]
BLAST of ClCG02G010000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120509|ref|XP_008460226.1|4.0e-1186.96PREDICTED: uncharacterized protein LOC103499109 [Cucumis melo][more]
gi|700195625|gb|KGN50802.1|9.9e-1090.00hypothetical protein Csa_5G265820 [Cucumis sativus][more]
gi|449445284|ref|XP_004140403.1|1.2e-07100.00PREDICTED: uncharacterized protein LOC101220672 isoform X1 [Cucumis sativus][more]
gi|728820354|gb|KHG03718.1|1.6e-0793.55Agropine synthesis reductase [Gossypium arboreum][more]
gi|763780392|gb|KJB47463.1|2.1e-0790.32hypothetical protein B456_008G040700 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G010000.1ClCG02G010000.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G010000Watermelon (97103) v2wcgwmbB138