ClCG02G009460 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGTGAGTCGCCTGGCCCCTCCAAATCAATTTCTCACCGCTTCTCGTGTCCGGCCCCTTCAAATTAATTTCTCCAAATCGATTTCTCACTTCGACGATAGGTGCTCTTTATTCTCTATTCCAAATCGATTTCTCCAAATTAGTTCCAAATCGGTGGTTCAGACGACCTCAACTTCTCTACTCTCACTTCGACGGTAGGTGCTCGGGTTTGGAGGGTTTTCAGTTCGGACGGTAGTGCCCAGTTCGATTTGGAGCGTGTTTTCAGTTCGGCGTTCGAGCCCAGTTCCGGTGTCCGACGTCCGTTCTCAGCCTGACACTTCTAGGTATGTTTCTCTCATCTTCTCAGACTGTAGCCTCTGTAATTTTGATCCCCCAATCAAGACCTCCGTTGAAGTTTGAACTCATTGAGAAATCAGTTGATTTTCTTCTATTTGATGAATACATTTTCTCCCGCTTTATCTTGATTAATACCATCTCAGTCTTCTCTTTCTTACACTTTGACAAAAATATGTCAAGAGGATTTTTTGGCATAAATTATTGGAGCTAATCAAGACATGGTTCCAATCATAAGATTTACTATTTTTATTCTAGCCGAGTTTTAATGGTGCATGATAAAGAAGCTGGGGTCCTTTAATTTTATGAGCAGTGGGTGACTTATTTTTCTTATGCATAATTGTGACCACACAAGTATATTTGTTCTGTATGTTATGAAGCTAGTTTATTTAGAAAGTACTTAAATTGCAATTAAACTTTTTGTCATTTGTATTGTGCATGTGGGTAACAATTGTTTTGTCCAAGATCTTGTTTTAGAAGTTCAGGCAAACATATTCCCTTAAAGGTTGACTTTGATTTTAGCCTATTTGTTGTTGTTTAGAATGTATTTAGCCTAATAAAGTAAAGTTGTAGTTCAACAAAGTGCAATAACACTAACGATTTGAACCGTCATAGACTTTTGTTTTCTTCTAACTTCAAACAACATATGGGTATTGGGTACTAACCATTATCATGGAAGATGTTCTTTTACATGGTTCTCATACACAAAGTGTGACTTAGCCACCTTTTAAGTTGTGTTTAGGGCTAAAGTGAGACAAGCACTTTTTAGTTTGTTACGAGTGTTAAAGTGTCACTTCTTTTTAGAAACTTTAGTTATGTGGTGTTCACAGTCCAAGTGTAACTCAGACACTTTTTAGTAACTTTTTTTTTTTTAATGTTGTTTTCAAAGTCAAAGTATAACATATACAGTTTTTTAGAATAGTTTATGTAATTTTGATAGTCAAAATGAAACTTAGGCATTGTAATGGAACTTATTAGGTGCCAAAGTGACACCTACACAGTTTTTAGTTTGTTTGGAGAGTGGAAGTAAGGTTGTTAAAAACGCACGATTCGTGATACGTATCGTACTATACTTATCGAAACAAAGCCAAAATGATTCAACTTGTGGTTTTGAATTGCAAATCTCATGTATCGCACGATTCAAGGTTATGAATCATGCGAATCGTGTTAATGGTAACGTTCCGATTCAGTTTTTAGAAGGAAAAAAAAACCATTTTCGAATTTCATCGCGCAGCCGCCGGAGAAGATGGGTTTTCTATCGAGTTGCAACATGTCGGACGGGAGAAGACGTGCTTCGCAGCCGGATGAGTGGAGAAGAAGAAAATGAAGATAGACTAGAAGAAAGATAAAATAATTGGTTGTGGGTTTTTTCAATTCTGAAGGATGTCTTTTCATTTTCCTTCTTTTTTAAAAAAAATGAGATAAACATTTTTTTTTTTTAAGTCTTTTCGTTGTCCAATCCTTTTTTAAAAAAACAAGATAAACCATTAATTCCTTCGTTTTCCAATTTTTTCTTTTTTTTAAATTCTTTTCATTTTCCTTTTTTATAATTATTTTATTATTGTCATTTTTAAATAATATTATTTTATTATTGTTATTATTTTGTTTTCCAATCTTTTTTTTTTAAACTTCTGATACACAATACGTTATGATACACGATACACTAAAATTAACATTTCGATACACATTCCGTTTTACGATTTAACAACTTTGAGTGGAAGTCACTTAGATACTTTTTATGAGCCTTTTACATGGTTTTCATTGACAACATTTGACTTAGCTACCTTTTAGAACATTTTTGGTGGTATTGAGGGATAAAGTGAGGCTTAGGCACTTTTAATTAGTTTGTTTCAAGATTATATGTGTGATTTAGATGCTTCTAAGGAACTTTTTACATAGTTTTCATAGATAAAATGTGACTTACCCATCTTTTAGGAGCATCTTAGGTGGTTTTTGAGTTCCAAAGTGAGACTTAGGAACTCTTTAGTTTGTTTTGAAGGTCAAAGTGTCGCTTAGCCACTTTTTATGAACTTTTTAGGTTGTTTTGAAAGTGGAAATGACACTTAAATGTGAAGCCGCTCCCTCTTGGTTGCACATGTTTTCTAAATTCTTTAAATTCTGTACTGTAGTTATGTTTGTATTTAGAACATTACATATTGTGTAATTTTATTAACATGTTTTTAATAAAGAGGCATAGAACTTTTATATTGTTTTCCTTTCATGGATGATCAAATTCAAAAGGGCAGCCATTCTTTTTCAATATAAAGGATATAATTTTGTCAAAAGTGAACCATTAGTCATCATCTTTTCATACTAGATTTACAATTATGGATAAATCATAGATTATCCAAAGATTATGAATTGGGTGCATAAAACTTCATCAATTTTGGATGTTCTAATACAAATAATGCCTTTATTCGTTGTCCTTGTTTGAAATGTGAGAATTGTGAAAACCAAAGTTGCAATGGTATTAGAGATCATTCATACGTCAATGGAATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGTGAAGAACTACGTACCTAACTCATCCTTATGTGGGGAATCTTTCAAGTTTGACACCTATATCTATGAAGAGAACGATGTTGGAAGTATATAAGAAATGGTTGAAGTTGCTCACGAGGAATATTCAAAAGACCCAAATTAATTTGAGAACTTGCTTAATGAAGCCGAAAAACCATTGTACGAATCATGCAAAAAATTCACCAAGTAGTCTACATTAGTAAAGTTGTATAATTTAAAAGCTAAATATGGATGGAGTGATTCTTTTATACTAGTAACCTAAGCAAGGCAAGTTTTCTATGTTGAAGACCCAAGTAGTCTGATTCTTTTATACTCATAATCTAAGCAAGGCAAGTGCTCTATGTTGAGGACCCAAGTAGTCTGATTCTTTTATACTCGTAATCTAAGCAAGGCAAGTGCTCTATGTTGAGGACCCAAGTAGTCTGATTCTTTTATACTCGTAATCTAAGCAAGGCAAGTGCTCTATGTTGAGGACCCAAGCAATGTTAGATGGTCAATTGTGCTTACTCCACCATAATGATATGCCAAATATTGATGCAAGCAATGATTTGGATGAGAATATCTCAAAATATGTACGATCAGACTAGGAAGGCGCATCGATTCCTAAATAACATTTTCATACCAATGACATACCAAATATTGATGCAAGTAATGATTTATGATTTTGGGCTCATTGTTATCTAATATTAGATCTGATTTTGGATATGCTTAATATGTATATTATTTCTTAACCTTGTTTGACAGTCAATTCTTATACCATATGGAGCACATCGAAGTGGATGATGGCCAGGAAATTGATGTTACTCTTGGAAAAGAAAACGGAATGGATGATGGCCAAGAAATTGTTGCTAGCTCAGCAAAATGAAACAAAGACTAAAAAAAAAAAAGAAAACAGGGACCTATCATTATATTCAACGTGACACATGTTAGGAGTGCAGGAGAGAGGAAGTTGGTGGAATATAATGACAACGGAGTACCTATTGGTGAAAATGGAGCCAAGTTAAACTCTTTTATTGGGTCGTGTGCGCATTATCATATCCCCATTACATATGCAACATGGAAGCGTGTGTGTGCTAAGTTGAAAGATAAGATATATAACATAGTTGAGGTATGTATGTCTTATTTTTTCGTTCTCTTGATACTATTTTTTTGGAAAAAGTAGTTTTTACTTGAGGTATGTATGTTTTCACAATTTTTAAATGTGTAGGCTGCCTTTATAATTGATAGTAGATCTAGAAAGGTCATTCTTAGAATCGCAGGTAGCATTCTGTAAATTTAAGCATTGGTTGACAACGAAATTTATCATGCCATTCAAGAATGAACCTTAACTTCTGCAACAACCACCAAAAATGTATTCCTATGTTGATCAAAAACATTGGGAAGAGTTTGTAAGATTGAGATTGTGTCAAACGTTTCAGGTATGAATACAATGTTTACATATTTTAGGTTTTAAATATTTGTTATGTTAATATACTAATAATTGTTACATTTGTGTAGGAAAGAAGAAACATCCAGCAAGAGCATCAAGCTAATAATAAGTATAACCATCAAATGTCAAGGAAAGGTTATGCTAATCTTTGTGAGGAAATGGTAAGAATTTAAGTTTATGTTTTCATGATTATTAAATCGTTTTAATGTATCCAACTTTGTCTTTGTTCGAATGTAGAAAAAAGTATCTTCAAATGAAGGTGATTTCGACAGAGCTAACGTGTGGAACAGACTCGAGTAAATAAGAATACGACAATGAACACGTCCAAGAAGTTGTCAATCAAATCGTGAGACATGCATTACATTTTGCATAAAGTAAGTTACAAATATACATTTATGAAATTATAATTGAATTTCATTTCTCTTCTTAGGACGAAATCTCAAGGACCAATGATCCACTCGGCAACAAACAACTATCTCCTAATGATGTTTTGACTCAAGCTTTGGGTACACAAGAAAGCAGAGGGCGTGTCTGTGGAGTTGGCGGTTTTGTTACAGGCCTCCTACTTTCACACAGTGAAACGTTCAAAACAAGGGGGGAATCAAAACGAGGAAATTAGTAAAGGGGATGAATCACTTCATCTGTGAGTTAAAGAATTGGAAGCTCACATTCAAATGACACACTCTACACCAACATCTGGATGTGGAAGTTGCTCCAAACCAAGACTGGCATACAAGATTGAATCCAAAAAGAAACCAGAAGACGACAAGAAGGTAAAGGGGATTAAATTCCAAGAAACACTAAAAGCAAGGTGAAGACAAAGGAGGTTAAAAAAAAAAAACAAGGTGAAGATGGATGTGATCTATCTGAATGATCAAGATGAGAATATCAAGAATGGGATAAAAAAAGAACAAACTTTAAAGGTAATTAGTTAAGTTTGCTCAATTTGTTGCATTGGTCGACTTTGTTGCATTATGAATTTGATATTGTTACATTATGATCACTTTGATGCATTAGGAGAAAGCATCAATGAGAATTGCTAAGAAAAAAGAGGTTGTTAGTGAGTCAACAATCAATTTGCCACTAACTTTAAAGTCAGTACTTAGGTTTTCTGAAAAGGTAATGAACAAAGAATCTGGCATTTTGTTCCAACTACCTGTTCAGCTGTTTGGTTTAAGTAGAAAACGTTGTGTCTTGCAAGAAGATATTATTGACTTTTGTAGCATGCAAGAAGTTAAGACTTTGACCTTGGTGGCTTATATGGC ATGGTGTGTGAGTCGCCTGGCCCCTCCAAATCAATTTCTCACCGCTTCTCGTACGACCTCAACTTCTCTACTCTCACTTCGACGGTGCTCGGGTTTGGAGGGTTTTCAGTTCGGACGGTAGTGCCCAGTTCGATTTGGAGCGTGTTTTCAGTTCGGCGTTCGAGCCCAGTTCCGGTGTCCGACGTCCGTTCTCAGCCTGACACTTCTAGTCAATTCTTATACCATATGGAGCACATCGAAGTGGATGATGGCCAGGAAATTGATGTTACTCTTGGAAAAGAAAACGGAATGGATGATGGCCAAGAAATTGGACCTATCATTATATTCAACGTGACACATGTTAGGAGTGCAGGAGAGAGGAAGTTGGTGGAATATAATGACAACGGAGTACCTATTGGTGAAAATGGAGCCAAGTTAAACTCTTTTATTGGGTCGTGTGCGCATTATCATATCCCCATTACATATGCAACATGGAAGCGTGTGTGTGCTAAGTTGAAAGATAAGATATATAACATAGTTGAGGAAAGAAGAAACATCCAGCAAGAGCATCAAGCTAATAATAAGTATAACCATCAAATGTCAAGGAAAGGTTATGCTAATCTTTGTGAGGAAATGGACGAAATCTCAAGGACCAATGATCCACTCGGCAACAAACAACTATCTCCTAATGATGTTTTGACTCAAGCTTTGGGTACACAAGAAAGCAGAGGGCGTGTCTGTGGAGTTGGCGGTTTTGTTACAGGCCTCCTACTTTCACACAGTGAAACGTTCAAAACAAGGGGGGAATCAAAACGAGGAAATTAGTAAAGGGGATGAATCACTTCATCTGTGAGTTAAAGAATTGGAAGCTCACATTCAAATGACACACTCTACACCAACATCTGGATGTGGAAGTTGCTCCAAACCAAGACTGGCATACAAGATTGAATCCAAAAAGAAACCAGAAGACGACAAGAAGGTAAAGGGGATTAAATTCCAAGAAACACTAAAAGCAAGGTGAAGACAAAGGAGGTTAAAAAAAAAAAACAAGGTGAAGATGGATGTGATCTATCTGAATGATCAAGATGAGAATATCAAGAATGGGATAAAAAAAGAACAAACTTTAAAGGTAATTAGTTAAGTTTGCTCAATTTGTTGCATTGGTCGACTTTGTTGCATTATGAATTTGATATTGTTACATTATGATCACTTTGATGCATTAGGAGAAAGCATCAATGAGAATTGCTAAGAAAAAAGAGGTTGTTAGTGAGTCAACAATCAATTTGCCACTAACTTTAAAGTCAGTACTTAGGTTTTCTGAAAAGGTAATGAACAAAGAATCTGGCATTTTGTTCCAACTACCTGTTCAGCTGTTTGGTTTAAGTAGAAAACGTTGTGTCTTGCAAGAAGATATTATTGACTTTTGTAGCATGCAAGAAGTTAAGACTTTGACCTTGGTGGCTTATATGGC ATGGTGTGTGAGTCGCCTGGCCCCTCCAAATCAATTTCTCACCGCTTCTCGTACGACCTCAACTTCTCTACTCTCACTTCGACGGTGCTCGGGTTTGGAGGGTTTTCAGTTCGGACGGTAGTGCCCAGTTCGATTTGGAGCGTGTTTTCAGTTCGGCGTTCGAGCCCAGTTCCGGTGTCCGACGTCCGTTCTCAGCCTGACACTTCTAGTCAATTCTTATACCATATGGAGCACATCGAAGTGGATGATGGCCAGGAAATTGATGTTACTCTTGGAAAAGAAAACGGAATGGATGATGGCCAAGAAATTGGACCTATCATTATATTCAACGTGACACATGTTAGGAGTGCAGGAGAGAGGAAGTTGGTGGAATATAATGACAACGGAGTACCTATTGGTGAAAATGGAGCCAAGTTAAACTCTTTTATTGGGTCGTGTGCGCATTATCATATCCCCATTACATATGCAACATGGAAGCGTGTGTGTGCTAAGTTGAAAGATAAGATATATAACATAGTTGAGGAAAGAAGAAACATCCAGCAAGAGCATCAAGCTAATAATAAGTATAACCATCAAATGTCAAGGAAAGGTTATGCTAATCTTTGTGAGGAAATGGACGAAATCTCAAGGACCAATGATCCACTCGGCAACAAACAACTATCTCCTAATGATGTTTTGACTCAAGCTTTGGGTACACAAGAAAGCAGAGGGCGTGTCTGTGGAGTTGGCGGTTTTGTTACAGGCCTCCTACTTTCACACAGTGAAACGTTCAAAACAAGGGGGGAATCAAAACGAGGAAATTAG MVCESPGPSKSISHRFSYDLNFSTLTSTVLGFGGFSVRTVVPSSIWSVFSVRRSSPVPVSDVRSQPDTSSQFLYHMEHIEVDDGQEIDVTLGKENGMDDGQEIGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEERRNIQQEHQANNKYNHQMSRKGYANLCEEMDEISRTNDPLGNKQLSPNDVLTQALGTQESRGRVCGVGGFVTGLLLSHSETFKTRGESKRGN
BLAST of ClCG02G009460 vs. TrEMBL
Match: A5B1X5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012055 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10 Identity = 51/175 (29.14%), Postives = 77/175 (44.00%), Query Frame = 1
BLAST of ClCG02G009460 vs. TrEMBL
Match: A5BLZ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025701 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-09 Identity = 47/157 (29.94%), Postives = 69/157 (43.95%), Query Frame = 1
BLAST of ClCG02G009460 vs. TrEMBL
Match: A0A0A0LAN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G270810 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 1
BLAST of ClCG02G009460 vs. TrEMBL
Match: A0A0A0LAN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G270810 PE=4 SV=1) HSP 1 Score: 38.5 bits (88), Expect = 1.5e+01 Identity = 37/162 (22.84%), Postives = 68/162 (41.98%), Query Frame = 1
HSP 2 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 32/102 (31.37%), Postives = 57/102 (55.88%), Query Frame = 1
BLAST of ClCG02G009460 vs. TrEMBL
Match: A5BSR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027409 PE=4 SV=1) HSP 1 Score: 35.8 bits (81), Expect = 9.7e+01 Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 1
HSP 2 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 45/158 (28.48%), Postives = 77/158 (48.73%), Query Frame = 1
BLAST of ClCG02G009460 vs. NCBI nr
Match: gi|778708464|ref|XP_011656204.1| (PREDICTED: uncharacterized protein LOC105435665 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 4.9e-28 Identity = 80/169 (47.34%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of ClCG02G009460 vs. NCBI nr
Match: gi|731436332|ref|XP_010645875.1| (PREDICTED: uncharacterized protein LOC104877969 isoform X2 [Vitis vinifera]) HSP 1 Score: 87.4 bits (215), Expect = 4.0e-14 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
BLAST of ClCG02G009460 vs. NCBI nr
Match: gi|731436332|ref|XP_010645875.1| (PREDICTED: uncharacterized protein LOC104877969 isoform X2 [Vitis vinifera]) HSP 1 Score: 31.2 bits (69), Expect = 3.4e+03 Identity = 15/41 (36.59%), Postives = 23/41 (56.10%), Query Frame = 1
HSP 2 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 1
BLAST of ClCG02G009460 vs. NCBI nr
Match: gi|659101935|ref|XP_008451868.1| (PREDICTED: uncharacterized protein LOC103493028 [Cucumis melo]) HSP 1 Score: 52.4 bits (124), Expect = 1.4e-03 Identity = 35/102 (34.31%), Postives = 47/102 (46.08%), Query Frame = 1
HSP 2 Score: 84.7 bits (208), Expect = 2.6e-13 Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 1
BLAST of ClCG02G009460 vs. NCBI nr
Match: gi|778691222|ref|XP_011653243.1| (PREDICTED: uncharacterized protein LOC101213947 [Cucumis sativus]) HSP 1 Score: 52.4 bits (124), Expect = 1.4e-03 Identity = 35/102 (34.31%), Postives = 47/102 (46.08%), Query Frame = 1
HSP 2 Score: 81.6 bits (200), Expect = 2.2e-12 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |