ClCG02G008270 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGTTTGATTCCAACCCCTTTGTTGGGGATTGTGAAATTTTTCATCTTTTATGTGGATCAGTCAAGATTAATTTTGGTGAAGAGCGAGCAGAGTTATACTGTTCACAATTGGCGTTCTTTCTTTTTATTATTATTTTTTTTCTTCTTATAATTGGGCCCTGAAATTCTGTACGATCACCCTTCAAGTTTTCTACCATTCTGAAAAGGAAAAGTGGAAAAGAACGTTGAGTGCGATAGCCACTGGCGGTTTCTTTCTTTTTCTTCCTAGCCTCCCTTCACGATAAAGCTTCTGGAAGAGGATTTTTGGGCAAGTACTCGAAACCCAGGTTAGAAAAGCCAAAGCTCTGCAATCAACTCCAGAGTTTGGATTTTTAGACCCCCATTTTCGTTAACTGTCCAATCATGCATCCCGATGATCAGCAGCAGCAGCCGTTGATAGAGGAGGAAGAGGAAGAAACTGCTTACGATTTGACGGAGAAGGTTGTGGTAATTGGGATCCACGAACCGGAGTCTGATTCGGACGTGGGTTTGCTGCCGTTTTCATGGAGGAAGCTCTGGCTGTTCACAGGGCCTGGGTTTTTGATGAGCATAGCGTTTCTAGATCCTGGGAATTTGGAGTCCAATCTTCAGGCTGGTGCTATAGCTGGGTATTCTTTGTTGTGGCTTCTGTTGTGGGCTACGGCCATGGGGCTTTTGATCCAGTTGCTTTCGGCTAGGCTTGGCGTTGCCACTGGCAGGCACTTGGCCGAGCTATGTAGAGAAGAGTACCCAACTTGGGCGAGGATTGTGCTGTGGGTCATGGCGGAGTTCGCCCTAATTGGGGCTGATATACAGGAAGTCATTGGGAGTGCTATTGCTATTAAGATTCTGAGTAACGGGGCTTTGCCTCTCTGGGTTGGAGTCATCATCACTGCTTTAGATTGGTAATTGTTTTTATTCCATCCCTATTCCCAAATTGGGTTTGTTGTGTATGACTATGTGTTTCCCCAAATGAAAATGCTTTTGTTGATTCTTGTTAGTTTTATCTTCCTGTTTCTTGAGAATTATGGTGTGAGGAAACTGGAGGCTGTTTTTGCTGTTCTCATTGCTACAATGGCAATCTCATTTGCTTGGATGTTTGGTGAAACTAAGCCAGATGGGAAGGAGCTTCTATTGGGTGAGGACTGAGGAGACTTGTTTTTTTGCTCTTTCATTATGTTTTGTATGTAAGTTTTCTGCTTATTATTGTCTGTGCCACTTCCACAATGGCCAACAATGGATCTTCTTTACAGGTATTTTGATTCCAAAACTTAGCTCCAAGACAATTAAACAGGCTGTTGCTGTTGTGGGGTGTATCATCATGCCTCATAATGTGTTTTTGCATTCTGCTCTTGTGCAGTCGCGTGATATTGATCCGAGTAAGAAAGGGCGGGTCCGGGAAGCTCTAAGATACTACTCCATTGAGTCCACTCTTGCCCTTTTTGTCTCCTTCATCATCAACTTGTTTGTTACAACTGTGTTTGCTAAAGCCTTCTATGGTACAGACATAGCGAATAGCATTGGTCTTGTAAATGCAGGCCAATATCTTCAAGATAAATATGGTGGAGGGCTTTTCCCCATTTTGTACATCTGGGCTATTGGTTTATTAGCTGCTGGCCAAAGTAGCACCATCACTGGTACCTATGCAGGACAGTTTATCATGAGTGGATTCCTGAACTTGAAGTTGAAAAAATGGCTAAGAGCTTTGATAACTAGAAGCTTTGCAATCATTCCAACTATGATTGTTGCTCTTGTGTTTGAAACTTCTGACTCGATGGTTGATGTTCTGAATGAATGGCTCAATGTCCTCCAGTCCATTCAGATTCCCTTTGCTCTGATTCCTCTTCTCTGTTTGGCTTCGAAGGAAAATCTAATGGGTAGTTTCAGAATTGGCCCCGTTTTAAAGGTATGTGTATGATGATCACTATTCTAAGTTTATGTGATACAGTCCATTGCAAACTAAATAATGATGCATCAATTACATGGTCACAACTTTGTTTTCTTCTTTGTGAAGACCCTATCTAGTGTAGTTATTAGATATCTTGCATATTAGTTTCATGTTTTAGGATCATGGATGGTAGCCTTGTTGATCTTGTTGAATTAAACTTAAATCCAAAAGTTGATAATTTTGTTGAATCAACCTCTTCTAATACTGCAGAGGTTTGGACATTAGAATTCTAATTTCACTTTTAATTTTTGCTTGACCAAACACTTTAGTCGATAATTTAGGACATACACTATCAAGCAATGGAAGAAATTCTAGGTATATTATAATGGAATACATTCTTATAGATTTAGAAGTCCTTGGCCTTCATCTTTGAATCTATAAGTGACATTATTGGATTGAGAAGCTTCAATTCTTTTTTCTCTAAGCACCAAAAAAAAAAAAAAAAAATGGTGTTGTCAGTGGTTTAGGTCTAAGATCATCTAAAACGTCCATGTAGTTCAATAAATAGTTTGGAAAAAAAACAATAATTGTTGTTCAAGAACTCACAACATGCGTTTCTGTTTCAGACAATCTCTTGGCTGGTGGCAGTCTTGGTAATGGCCATCAACGGGTACCTTTTGGTGAGCTTCTTCTCATCGGAAGTGAACGGAGTGCTCGTTGCCATTTTTGTATTTGTCTTCATCGCTGCATATCTTGCCTTTGTTGTCTACCTCGTCTATCAAAGCATTTCGTTTTCAAGTTGGCACAACTTCATTAATCGGAAGACTTACACGGCCAATGGAAACTGAGCGATCATCTTCAACTTCGACTCAAAGATATTAGATTGCAGATCGATAATTGTCAAATAATTGTCTTGACCTCGAGCATCTGTTAAAATGCAGTCGAAGAACACTTCCCATGAGTAACATATCAGTTAGCTCAAGACATATGAGTTATGATTTGACAGGTTTTTCCTTGAGAAAAGCTGTTTAGGTTACTTTGTATTATAATTGTTCATTTTTCTGTTTTTCATACAGACAAATGAAGCAGATTATAGGCTTTAGTTCAACCTGAAATCTGGTGGGTGATTTAAGTTTATATTTAGTCTTATAGTCTTAGGTTATATTAAAGTTATTCAAGTGTTCTGAATTTGCTTGGCAC GAGTTTGATTCCAACCCCTTTGTTGGGGATTGTGAAATTTTTCATCTTTTATGTGGATCAGTCAAGATTAATTTTGGTGAAGAGCGAGCAGAGTTATACTGTTCACAATTGGCGTTCTTTCTTTTTATTATTATTTTTTTTCTTCTTATAATTGGGCCCTGAAATTCTGTACGATCACCCTTCAAGTTTTCTACCATTCTGAAAAGGAAAAGTGGAAAAGAACGTTGAGTGCGATAGCCACTGGCGGTTTCTTTCTTTTTCTTCCTAGCCTCCCTTCACGATAAAGCTTCTGGAAGAGGATTTTTGGGCAAGTACTCGAAACCCAGGTTAGAAAAGCCAAAGCTCTGCAATCAACTCCAGAGTTTGGATTTTTAGACCCCCATTTTCGTTAACTGTCCAATCATGCATCCCGATGATCAGCAGCAGCAGCCGTTGATAGAGGAGGAAGAGGAAGAAACTGCTTACGATTTGACGGAGAAGGTTGTGGTAATTGGGATCCACGAACCGGAGTCTGATTCGGACGTGGGTTTGCTGCCGTTTTCATGGAGGAAGCTCTGGCTGTTCACAGGGCCTGGGTTTTTGATGAGCATAGCGTTTCTAGATCCTGGGAATTTGGAGTCCAATCTTCAGGCTGGTGCTATAGCTGGGTATTCTTTGTTGTGGCTTCTGTTGTGGGCTACGGCCATGGGGCTTTTGATCCAGTTGCTTTCGGCTAGGCTTGGCGTTGCCACTGGCAGGCACTTGGCCGAGCTATGTAGAGAAGAGTACCCAACTTGGGCGAGGATTGTGCTGTGGGTCATGGCGGAGTTCGCCCTAATTGGGGCTGATATACAGGAAGTCATTGGGAGTGCTATTGCTATTAAGATTCTGAGTAACGGGGCTTTGCCTCTCTGGGTTGGAGTCATCATCACTGCTTTAGATTGTTTTATCTTCCTGTTTCTTGAGAATTATGGTGTGAGGAAACTGGAGGCTGTTTTTGCTGTTCTCATTGCTACAATGGCAATCTCATTTGCTTGGATGTTTGGTGAAACTAAGCCAGATGGGAAGGAGCTTCTATTGGGTGAGGACTGAGGAGACTTGTTTTTTTGCTCTTTCATTATGTTTTGTATGTAAGTTTTCTGCTTATTATTGTCTGTGCCACTTCCACAATGGCCAACAATGGATCTTCTTTACAGGTATTTTGATTCCAAAACTTAGCTCCAAGACAATTAAACAGGCTGTTGCTGTTGTGGGGTGTATCATCATGCCTCATAATGTGTTTTTGCATTCTGCTCTTGTGCAGTCGCGTGATATTGATCCGAGTAAGAAAGGGCGGGTCCGGGAAGCTCTAAGATACTACTCCATTGAGTCCACTCTTGCCCTTTTTGTCTCCTTCATCATCAACTTGTTTGTTACAACTGTGTTTGCTAAAGCCTTCTATGGTACAGACATAGCGAATAGCATTGGTCTTGTAAATGCAGGCCAATATCTTCAAGATAAATATGGTGGAGGGCTTTTCCCCATTTTGTACATCTGGGCTATTGGTTTATTAGCTGCTGGCCAAAGTAGCACCATCACTGGTACCTATGCAGGACAGTTTATCATGAGTGGATTCCTGAACTTGAAGTTGAAAAAATGGCTAAGAGCTTTGATAACTAGAAGCTTTGCAATCATTCCAACTATGATTGTTGCTCTTGTGTTTGAAACTTCTGACTCGATGGTTGATGTTCTGAATGAATGGCTCAATGTCCTCCAGTCCATTCAGATTCCCTTTGCTCTGATTCCTCTTCTCTGTTTGGCTTCGAAGGAAAATCTAATGGGTAGTTTCAGAATTGGCCCCGTTTTAAAGACAATCTCTTGGCTGGTGGCAGTCTTGGTAATGGCCATCAACGGGTACCTTTTGGTGAGCTTCTTCTCATCGGAAGTGAACGGAGTGCTCGTTGCCATTTTTGTATTTGTCTTCATCGCTGCATATCTTGCCTTTGTTGTCTACCTCGTCTATCAAAGCATTTCGTTTTCAAGTTGGCACAACTTCATTAATCGGAAGACTTACACGGCCAATGGAAACTGAGCGATCATCTTCAACTTCGACTCAAAGATATTAGATTGCAGATCGATAATTGTCAAATAATTGTCTTGACCTCGAGCATCTGTTAAAATGCAGTCGAAGAACACTTCCCATGAGTAACATATCAGTTAGCTCAAGACATATGAGTTATGATTTGACAGGTTTTTCCTTGAGAAAAGCTGTTTAGGTTACTTTGTATTATAATTGTTCATTTTTCTGTTTTTCATACAGACAAATGAAGCAGATTATAGGCTTTAGTTCAACCTGAAATCTGGTGGGTGATTTAAGTTTATATTTAGTCTTATAGTCTTAGGTTATATTAAAGTTATTCAAGTGTTCTGAATTTGCTTGGCAC ATGCATCCCGATGATCAGCAGCAGCAGCCGTTGATAGAGGAGGAAGAGGAAGAAACTGCTTACGATTTGACGGAGAAGGTTGTGGTAATTGGGATCCACGAACCGGAGTCTGATTCGGACGTGGGTTTGCTGCCGTTTTCATGGAGGAAGCTCTGGCTGTTCACAGGGCCTGGGTTTTTGATGAGCATAGCGTTTCTAGATCCTGGGAATTTGGAGTCCAATCTTCAGGCTGGTGCTATAGCTGGGTATTCTTTGTTGTGGCTTCTGTTGTGGGCTACGGCCATGGGGCTTTTGATCCAGTTGCTTTCGGCTAGGCTTGGCGTTGCCACTGGCAGGCACTTGGCCGAGCTATGTAGAGAAGAGTACCCAACTTGGGCGAGGATTGTGCTGTGGGTCATGGCGGAGTTCGCCCTAATTGGGGCTGATATACAGGAAGTCATTGGGAGTGCTATTGCTATTAAGATTCTGAGTAACGGGGCTTTGCCTCTCTGGGTTGGAGTCATCATCACTGCTTTAGATTGTTTTATCTTCCTGTTTCTTGAGAATTATGGTGTGAGGAAACTGGAGGCTGTTTTTGCTGTTCTCATTGCTACAATGGCAATCTCATTTGCTTGGATGTTTGGTGAAACTAAGCCAGATGGGAAGGAGCTTCTATTGGGTGAGGACTGA MHPDDQQQQPLIEEEEEETAYDLTEKVVVIGIHEPESDSDVGLLPFSWRKLWLFTGPGFLMSIAFLDPGNLESNLQAGAIAGYSLLWLLLWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARIVLWVMAEFALIGADIQEVIGSAIAIKILSNGALPLWVGVIITALDCFIFLFLENYGVRKLEAVFAVLIATMAISFAWMFGETKPDGKELLLGED
BLAST of ClCG02G008270 vs. Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 352.4 bits (903), Expect = 3.5e-96 Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = 1
BLAST of ClCG02G008270 vs. Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 2.3e-95 Identity = 173/221 (78.28%), Postives = 195/221 (88.24%), Query Frame = 1
BLAST of ClCG02G008270 vs. Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.7e-90 Identity = 163/209 (77.99%), Postives = 180/209 (86.12%), Query Frame = 1
BLAST of ClCG02G008270 vs. Swiss-Prot
Match: NRAM6_ORYSJ (Metal transporter Nramp6 OS=Oryza sativa subsp. japonica GN=NRAMP6 PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.5e-86 Identity = 158/220 (71.82%), Postives = 182/220 (82.73%), Query Frame = 1
BLAST of ClCG02G008270 vs. Swiss-Prot
Match: NRAM2_ORYSJ (Metal transporter Nramp2 OS=Oryza sativa subsp. japonica GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.4e-81 Identity = 157/215 (73.02%), Postives = 169/215 (78.60%), Query Frame = 1
BLAST of ClCG02G008270 vs. TrEMBL
Match: A0A0A0LN03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G423700 PE=3 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 9.6e-117 Identity = 213/220 (96.82%), Postives = 215/220 (97.73%), Query Frame = 1
BLAST of ClCG02G008270 vs. TrEMBL
Match: A0A061DGW0_THECC (Natural resistance-associated macrophage protein 3 OS=Theobroma cacao GN=TCM_000729 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.3e-97 Identity = 175/220 (79.55%), Postives = 198/220 (90.00%), Query Frame = 1
BLAST of ClCG02G008270 vs. TrEMBL
Match: I1LH97_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G051500 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 6.4e-97 Identity = 176/218 (80.73%), Postives = 195/218 (89.45%), Query Frame = 1
BLAST of ClCG02G008270 vs. TrEMBL
Match: A0A0B0N933_GOSAR (Metal transporter Nramp3-like protein OS=Gossypium arboreum GN=F383_16175 PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 8.4e-97 Identity = 177/220 (80.45%), Postives = 195/220 (88.64%), Query Frame = 1
BLAST of ClCG02G008270 vs. TrEMBL
Match: B9SG31_RICCO (Natural resistance-associated macrophage protein, putative OS=Ricinus communis GN=RCOM_1154780 PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 8.4e-97 Identity = 180/220 (81.82%), Postives = 195/220 (88.64%), Query Frame = 1
BLAST of ClCG02G008270 vs. TAIR10
Match: AT2G23150.1 (AT2G23150.1 natural resistance-associated macrophage protein 3) HSP 1 Score: 352.4 bits (903), Expect = 2.0e-97 Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = 1
BLAST of ClCG02G008270 vs. TAIR10
Match: AT5G67330.1 (AT5G67330.1 natural resistance associated macrophage protein 4) HSP 1 Score: 349.7 bits (896), Expect = 1.3e-96 Identity = 173/221 (78.28%), Postives = 195/221 (88.24%), Query Frame = 1
BLAST of ClCG02G008270 vs. TAIR10
Match: AT1G47240.1 (AT1G47240.1 NRAMP metal ion transporter 2) HSP 1 Score: 333.6 bits (854), Expect = 9.5e-92 Identity = 163/209 (77.99%), Postives = 180/209 (86.12%), Query Frame = 1
BLAST of ClCG02G008270 vs. TAIR10
Match: AT4G18790.1 (AT4G18790.1 NRAMP metal ion transporter family protein) HSP 1 Score: 295.8 bits (756), Expect = 2.2e-80 Identity = 141/211 (66.82%), Postives = 169/211 (80.09%), Query Frame = 1
BLAST of ClCG02G008270 vs. TAIR10
Match: AT1G15960.1 (AT1G15960.1 NRAMP metal ion transporter 6) HSP 1 Score: 178.3 bits (451), Expect = 5.1e-45 Identity = 91/186 (48.92%), Postives = 126/186 (67.74%), Query Frame = 1
BLAST of ClCG02G008270 vs. NCBI nr
Match: gi|659111615|ref|XP_008455821.1| (PREDICTED: metal transporter Nramp3-like [Cucumis melo]) HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-117 Identity = 215/220 (97.73%), Postives = 216/220 (98.18%), Query Frame = 1
BLAST of ClCG02G008270 vs. NCBI nr
Match: gi|449468323|ref|XP_004151871.1| (PREDICTED: metal transporter Nramp3-like [Cucumis sativus]) HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116 Identity = 213/220 (96.82%), Postives = 215/220 (97.73%), Query Frame = 1
BLAST of ClCG02G008270 vs. NCBI nr
Match: gi|590705422|ref|XP_007047433.1| (Natural resistance-associated macrophage protein 3 [Theobroma cacao]) HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97 Identity = 175/220 (79.55%), Postives = 198/220 (90.00%), Query Frame = 1
BLAST of ClCG02G008270 vs. NCBI nr
Match: gi|356541715|ref|XP_003539319.1| (PREDICTED: metal transporter Nramp3-like [Glycine max]) HSP 1 Score: 361.7 bits (927), Expect = 9.2e-97 Identity = 176/218 (80.73%), Postives = 195/218 (89.45%), Query Frame = 1
BLAST of ClCG02G008270 vs. NCBI nr
Match: gi|255567945|ref|XP_002524950.1| (PREDICTED: metal transporter Nramp3 [Ricinus communis]) HSP 1 Score: 361.3 bits (926), Expect = 1.2e-96 Identity = 180/220 (81.82%), Postives = 195/220 (88.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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