ClCG02G007150 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTATGCGAGAGAACACCTCCGCTACGCTGGTCGAGTTGGAGATCATACACACTGCCCTCTGCACCTTGGCAAGGTCACCGCCCGGAACCACCGTTGGCGGCTGGTAGTTAATGCCACACTTGAAACCAGTGGGGCACCAATCCACGAACTGGATCGTGCGCTTGGTTTTGATGGTTGCAACAGCGGCATTGACGTCCTTCGGAACAACATCTCCTCGATACATCAGACAGCAAGCCATGTACTTCCCATGGCGGGGATCGCACTTGGCCATCATGGAAGATGGCTCGAATGCGCTGTTGGTGATCTCCGCTACAGAGAGCTGTTCATGGTAGGCCTTCTCTGCAGAGATCACAGGGGCATAGGAGGAAAGCATGAAGTGGATTCTTGGGTAAGGGACTAAATTCGTTTGGAACTCAGTGACGTCTACATTCAGAGCTCCATCGAACCGTAGAGAGGCTGTCAAGGACGAAATCACCTGAACATCATTTCAAAGAAACAGTAGTCCATGATAAAATTTGTTAGATTAGTCAAGTTCATCATTTGAAAGTAAAGGTGCCAAAAATTAAAGATCAAAATGATATTTTAACCAATTTGTCACCACAACATTCAAGAAAATGAAAGGCAGTTAATATGTACCTGAGAGATGAGACGGTTGAGGTTTGTGTATGTTGGTCGCTCAATGTCAAGGGAGCGTCTACAGATGTCATAAATGGCCTCATTGTCAAGAAGCACAGAAACATCTGTATGTTCAAGGAGGGAATGGGTTGAAAGAACACTGTTGTAAGGTTCAACAACAGAGGTGGAAACTTGTGGAGAGGGATAAACAGTGAAACCAAGCTTTGATTTCTTGCCATAGTCAACAGACAAACGCTCCAAAAGGAGGGAGCCAAGACCAGATCCAGTACCCCCACCAACAGCGTTAAACACCAGGAAGCCTTGAAGTCCAGTGCAGTTGTCAGCGAGCTTTCTAATGCGATCCAAACAGAGATCAACAATCTCCTTGCCAACTGAAACACAAGTTTTTCCAATTATCATTACACAGTTCATGAAAAAACACCATGGTATACGTTCAAAATATTGATTGAATTAGCTTATACGAATGTGACAATTTGAGATGCTTACTGGTGTAATGGCCACGAGCAAAGTTGTTGGCAGCATCTTCTTTGCCGCTGATTAGCTGTTCAGGATGGAACAATTGGCGATACATTCCAGTCCTCACCTCATCAATGACAGTAGGCTCGAGATCAACAAAAACAGCACGAGGAACATGCTTGCCTGCACCTGTTTCACTGAAGAAGGTGTTGAAGGCATCATCGCCTCCAGCTACAGTTGTGTCACTCGGCATTCGACCATCAGGCTGAAATACAGATGAAAAAATTTAGACAAGATAAAAATATCCCTCAACATGTCTGATATATCCATCTATATATATATTTATATATCTATAAATCAAGGATATCTCCAACATTTTTTATAAATGCTCTTAAAACATGAAAAACCTTATCTACTTAGACTAAATATAAATAGAAATATTAATAACAATGTTCATAACTTAGTTTGGGAGAAAAAACAAAAAAAAAAAAATTCATCTAACTAAAATTTATAAATTTAGCGACTTATAAGAACTATATGTTGATAATCAATATTTTATATTTTCATATTGATATAAACATTGAAATTTTATCCTTGGACAGCATGAAACTCAAATTTGGAATTCATTACAATTCTCGTGGAAAAAAGAAAAAGAATAAACATTCGCACACTTGAATTGAATTCCATACCCACATATAATCATTTCAGTTCATTTTTTAATGACGTGAAAGTTCTAAAACTAGAAACTCTAATAAGAAACAGCTAACTATTTTCACAAATATCAATCAGATCTCAGTAGAATTATGA ATGGTCTATGCGAGAGAACACCTCCGCTACGCTGGTCGAGTTGGAGATCATACACACTGCCCTCTGCACCTTGGCAAGGTCACCGCCCGGAACCACCGTTGGCGGCTGGTAGTTAATGCCACACTTGAAACCAGTGGGGCACCAATCCACGAACTGGATCGTGCGCTTGGTTTTGATGGTTGCAACAGCGGCATTGACGTCCTTCGGAACAACATCTCCTCGATACATCAGACAGCAAGCCATGTACTTCCCATGGCGGGGATCGCACTTGGCCATCATGGAAGATGGCTCGAATGCGCTGTTGGTGATCTCCGCTACAGAGAGCTGTTCATGGTAGGCCTTCTCTGCAGAGATCACAGGGGCATAGGAGGAAAGCATGAAGTGGATTCTTGGATCTCAGTAGAATTATGA ATGGTCTATGCGAGAGAACACCTCCGCTACGCTGGTCGAGTTGGAGATCATACACACTGCCCTCTGCACCTTGGCAAGGTCACCGCCCGGAACCACCGTTGGCGGCTGGTAGTTAATGCCACACTTGAAACCAGTGGGGCACCAATCCACGAACTGGATCGTGCGCTTGGTTTTGATGGTTGCAACAGCGGCATTGACGTCCTTCGGAACAACATCTCCTCGATACATCAGACAGCAAGCCATGTACTTCCCATGGCGGGGATCGCACTTGGCCATCATGGAAGATGGCTCGAATGCGCTGTTGGTGATCTCCGCTACAGAGAGCTGTTCATGGTAGGCCTTCTCTGCAGAGATCACAGGGGCATAGGAGGAAAGCATGAAGTGGATTCTTGGATCTCAGTAGAATTATGA MVYAREHLRYAGRVGDHTHCPLHLGKVTARNHRWRLVVNATLETSGAPIHELDRALGFDGCNSGIDVLRNNISSIHQTASHVLPMAGIALGHHGRWLECAVGDLRYRELFMVGLLCRDHRGIGGKHEVDSWISVEL
BLAST of ClCG02G007150 vs. TrEMBL
Match: A0A0P6K073_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 1
BLAST of ClCG02G007150 vs. TrEMBL
Match: A0A0P6IQJ3_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 9.9e-32 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 1
BLAST of ClCG02G007150 vs. TrEMBL
Match: K3X1R8_PYTUL (Uncharacterized protein (Fragment) OS=Pythium ultimum DAOM BR144 GN=PYU1_G011142 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.1e-29 Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 1
BLAST of ClCG02G007150 vs. TrEMBL
Match: A0A146R1P3_FUNHE (Uncharacterized protein (Fragment) OS=Fundulus heteroclitus PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.5e-29 Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 1
BLAST of ClCG02G007150 vs. TrEMBL
Match: J3LSE0_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.8e-29 Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 1
BLAST of ClCG02G007150 vs. NCBI nr
Match: gi|528273988|gb|EPY42742.1| (hypothetical protein AGDE_01181 [Angomonas deanei]) HSP 1 Score: 133.7 bits (335), Expect = 2.5e-28 Identity = 69/136 (50.74%), Postives = 91/136 (66.91%), Query Frame = 1
BLAST of ClCG02G007150 vs. NCBI nr
Match: gi|528248622|gb|EPY33676.1| (hypothetical protein STCU_02090 [Strigomonas culicis]) HSP 1 Score: 127.9 bits (320), Expect = 1.4e-26 Identity = 66/130 (50.77%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of ClCG02G007150 vs. NCBI nr
Match: gi|528244163|gb|EPY32002.1| (hypothetical protein STCU_03026 [Strigomonas culicis]) HSP 1 Score: 127.9 bits (320), Expect = 1.4e-26 Identity = 66/130 (50.77%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of ClCG02G007150 vs. NCBI nr
Match: gi|557850652|gb|ESS55048.1| (hypothetical protein TCDM_13504 [Trypanosoma cruzi Dm28c]) HSP 1 Score: 126.7 bits (317), Expect = 3.1e-26 Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of ClCG02G007150 vs. NCBI nr
Match: gi|507672568|ref|XP_004709127.1| (PREDICTED: contactin-5 [Echinops telfairi]) HSP 1 Score: 126.3 bits (316), Expect = 4.0e-26 Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |