ClCG02G006560 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTACTACCGCCGATTGCGTGTTGTAATGGAGGTTGAACCAGACGAGAAGGAATTGAAAGCCGCCGGAGCTCAGCTCCTGCCTGACGGACGGCGAGGTCTCCGTATACATGGTTGGGAGATCGAGACACAAAAGCGCTCCATTCTTACCTCCTCCAATTTCGAGCAGTACTTTCTTTTTCTCTCCTTCTATCTATCATACCTGCTACTGATTTTTGAAAGAATGTTGCGTCGTTCTAAATTAAACTTCTCTACTTCACGAAAGTCTGGAAATGGATTTTCGTAAGAAATCAAAGAGTTTATTCTGCTTTCGAGTCCGCTTTTCCCTTTCCTAAATTGAAATTTCTTGTGATCACTGTCATTCAAATGAATCGTTAGCCTCAGTTGTGCTTCAGTTTTAATTTCTGAGCAGATTTATCGGCCTGTGAATGCAGATAACTGTTGACTATGATCTTTTTTTGAAAGAAAAATTTAAATTTAAACCTTGAACCGCTGTTTTAATTGCCCAGCGATAACTTTCTTTCCATGTCTTATACTCTATAGAGCATTATTTTGAACTACTATTTCTTTAGGTTGTAGGCTTTGGATGACATTATTTTGTTCTTAATCATGAATAGAACGTCCATGGATCATTTCTATTCAGACAGAGGTATTTTTTTGGCAGGATGTAGTGATTGGTTGTAAGCAGGGATAAAAATTTCCGTGGATATGCCGATATATCCATAAATAGAAGGGTTCGATATCGATGTTAATTATACATGGATATCTCTAACATTTTTTATTAATGCTTGTAAAACATACAAATGTCATCTATTTAGTCTAGTATGAATAGGAATACTAATAACAATCTCCGTAACTTAGTTTGGGAGTAATAACAACTTAATTATTAATCTAAATAAATTTTATAAAATTCGTGATCTACATAAATATCCGTCGATATCGATATTTTGACGATATATCCATAAAATTGAAACGTCAATATCGATATCGACATCGATATTTTAATCGTTGGTTTTAAGTTCTATAGGAAATGAAACCGAAGGTGGACAAATTGTGATGTTCTTTTGTTGTTGCTTAAAGTTAATGACTACCTTTATTCTTTGTAGTTTCAATTGAGATGAATCCCTAGACATGCACATGCAAGAATAAAAAATATGTCAATTAACAGTTGCACTTTGAGTAACGTCACTCAATCTGCTTGCAGATGGGAACAGAAACTTCAAACCTCTCATTTGCCCGAGATGGTGTTCGGTGACAGTTTGTTAGTTCTCAAACATTTTGAAACTGGAGTTCAAATTTATTTTAATGCCTTTGATGCTCTGACTGGGTGGAAAAAGGAAGCTCTGCCTCCTGTTGAGGTTCCTGCAGCTGCAAAATGGAAATTCAGAAGGTAACGGCAATTTTTATTTCTTGTTGACCTAATGAATGACAAGTATTAACAGATTTATGTCAAGAAGTCATCGTTATACTTATACATTACTTTGCAGTATTTATATATATATATTTCCCACGTCTCATGAAAGTTTTTCTACTTGATAGATAGAATATATCACTGTAGGAACTGACAATGTTATGAATTTGCAGCAAACCTTCCCAACAGGTGATATTGGATTATGATTATACATTTACAACGCCATATTGTGGAAGTGAAATGATTGAAGCAGATACAGAGAAGGTAGATTCTTTTGCCCTTTAAATCCATGGTAGCGGCGGTTTCTGGTTGAGTTGAGTTCTTGGATAGCTTTTGTTGGTTTGGGCGTTTTCTGACCCATTAATATTTTTACCGAGTTGAAGTTTTCTTATTTATTGCCTCTCCGTTTCGTACCTTGACATTGAGCATCAATTTGAACCGTGAATGTGATTGCAAGAGCATTTAATTTCTAAACTGAAGAATGCGATTGCTGTATCAGTAACTAGTATTTTCTATTATGATCAGCATGGAAGAGAGCAAAAATGTGAAGAAAGCAATGGTCTCTGTTGGGAGGACAGCAAGGAGAAAATTGATTTAGTCTCACTCTCACTAAAGGAGCCTATCCTCTTTTATGATGAGGTAGGAAGTATGAAATATGGAAGAGCATATATATACACGAATATTTTGTGTGTATAATTTCTCTTGGGGTAAAAATCAATTTATACTTCTTTAGGTTGTATCACCTATACCCCAAACTAATAATTTTACCAATTAGAACTCTAAACTTTCATAAGTGAATAAATTTAGACCTATTTTGGGTAAAAATTAATCTATTTTTCTTGACTTATTTGAGAAGAATATGTGTTAATTTCTTTGCTTGAGGGAAGAATAATTTTATTTCAGTAATTTTGAGTTGAACTAAAAAAAAATTACGTGAAGATATTTATCAATCACTATTGGAGGGTCTAAATTGATTCACTTATGATATTAGGTATATAAAGTATGAACCCTATTGCAACATAAAAGGGAAATTTTCATTATTAGTTTCCTAATTTCGTAAAAAAAAATTGATTCACTTATGAAAATTTAGATTTTAAATTGATACAATTATTATTTTGAGATTTTCATTGATACCGAAGTTTTGGGGGTATAAATTGAATTTTTCCTTTTTTTTCTTTCCCTTTTTGTTTTGTTTTGTTTTGTTTAAGTCCTCCCTTCGGGGTATATTCTTTCCTCCCCTGATCTAACTGTACTTGGAACTCAACAGGTAATCTTATATGAGGATGAGCTGGCTGACAATGGCATATCACTTTTAACAGTTAAAGTGGTAGGTTACCAATACCAATATGATGTTACTAGTATGGAAGTAATGTTCTTGCTAAAGTACTAAGATATCACCAGGGACTTACATTTTTTTGTTTGAATTTCTAGAGAGTCATGCCAAGTGGTTGGTTTCTTCTTTTACGTTTCTGGGTAAGTTATCACTCTTGATTTTTTGAAAATTTATTCATTATTCCTCTAAGAAATTTTAAACCATTTTCACCCACTCATCATTGTCTTAGCATTTTTAATGAGAGAATGTTTGGACAATTGGAGAACTTTGAGGATAACAATGGGGAGTACAATTTTAGTTCTTTGGCTTACCATTTCTTTTCCTCTCTAACTTTGGTTCTACAGCTTAGAGTTGATGGAGTGCTCATGAGACTGAGGGACACTCGTATGCATTGCATATTTAGCAACAGTGAAAATCCAATAATTCTTCGAGAAAGTTGCTGGAGGGAGGCTACGTTTCAAGCTCTCGCTGAAGTAAGAGTTCATTGGCTATTGCATGCTAAGGTTTGCTTGTTGTGTTAGGGGAAGATGTTAGACTCAAAATATGAAATATTAGTCCTTCGGAAATTTTATTTTTCTAAATAATATCAACCTCTGCCCTCATGGGGAAGCCCCAGTGGCAAGGGCTCTCTTAGAGCTCCCAAGTTCGAATCTACGGGTGAGATTAATACCAAAAATTCTTGATGTTCCCGGGTCTGGGTGCCCAGGTATAGGGGAACAAAACTCCAACTCCTGGTTATATATATATATAAAATCAGCATGTGTAAAACATTAGCTAATTAAGCAACTTTTATCTCAAGAACCAAAACTCCATGTGATGTTGGAAATGTTATCTCAAGAACAAAAACTGATTTAAGTACAAGAAACTTTTATGTTCTTGGATGTGTAGTGTGTCTGTACCGTGTCAAAAGCTAATTAAGCAACTTGCTTAAGCATCAGTAATGAAAAAAGCAATACCAGAGTGCATGTTATAGGAGCAAATAGTACAGTTATTCTTGCTACAACAGTCTCCATATCTTCTTCACAAAATCTCATATTTTCAGTTGTCTTATACAATTTGATGATGTTTTTATCCGTGAACATTATCTGAATCAATGAATTGATATGCAGAAAGGATACCCGTCTGATTCTGCGGCCTATAACGATCCAAGTGTCATCTGCGACAGACTCCAGATTATTATGCAGAAAACCCAAAAGCTCAGAGTCTCTGGTAAATTATAATCTTGTAAATTGATACCACATCATTCTAGTCGATTAGCATTTCCTCGTGTATGTTGGTGCTGAAGTTTTTCACTTATAAATATTTATTCCATGGCTTATGTTGGATAAGTTAACTTGTTTGCATCTTTTTTCTAGGC CTACTACCGCCGATTGCGTGTTGTAATGGAGGTTGAACCAGACGAGAAGGAATTGAAAGCCGCCGGAGCTCAGCTCCTGCCTGACGGACGGCGAGGTCTCCGTATACATGGTTGGGAGATCGAGACACAAAAGCGCTCCATTCTTACCTCCTCCAATTTCGAGCAATGGGAACAGAAACTTCAAACCTCTCATTTGCCCGAGATGGTGTTCGGTGACAGTTTGTTAGTTCTCAAACATTTTGAAACTGGAGTTCAAATTTATTTTAATGCCTTTGATGCTCTGACTGGGTGGAAAAAGGAAGCTCTGCCTCCTGTTGAGGTTCCTGCAGCTGCAAAATGGAAATTCAGAAGCAAACCTTCCCAACAGGTGATATTGGATTATGATTATACATTTACAACGCCATATTGTGGAAGTGAAATGATTGAAGCAGATACAGAGAAGCATGGAAGAGAGCAAAAATGTGAAGAAAGCAATGGTCTCTGTTGGGAGGACAGCAAGGAGAAAATTGATTTAGTCTCACTCTCACTAAAGGAGCCTATCCTCTTTTATGATGAGGTAATCTTATATGAGGATGAGCTGGCTGACAATGGCATATCACTTTTAACAGTTAAAGTGAGAGTCATGCCAAGTGGTTGGTTTCTTCTTTTACGTTTCTGGCTTAGAGTTGATGGAGTGCTCATGAGACTGAGGGACACTCGTATGCATTGCATATTTAGCAACAGTGAAAATCCAATAATTCTTCGAGAAAGTTGCTGGAGGGAGGCTACGTTTCAAGCTCTCGCTGAAGTAAGAGTTCATTGGCTATTGCATGCTAAGAAAGGATACCCGTCTGATTCTGCGGCCTATAACGATCCAAGTGTCATCTGCGACAGACTCCAGATTATTATGCAGAAAACCCAAAAGCTCAGAGTCTCTGGTAAATTATAATCTTGTAAATTGATACCACATCATTCTAGTCGATTAGCATTTCCTCGTGTATGTTGGTGCTGAAGTTTTTCACTTATAAATATTTATTCCATGGCTTATGTTGGATAAGTTAACTTGTTTGCATCTTTTTTCTAGGC ATGGAGGTTGAACCAGACGAGAAGGAATTGAAAGCCGCCGGAGCTCAGCTCCTGCCTGACGGACGGCGAGGTCTCCGTATACATGGTTGGGAGATCGAGACACAAAAGCGCTCCATTCTTACCTCCTCCAATTTCGAGCAATGGGAACAGAAACTTCAAACCTCTCATTTGCCCGAGATGGTGTTCGGTGACAGTTTGTTAGTTCTCAAACATTTTGAAACTGGAGTTCAAATTTATTTTAATGCCTTTGATGCTCTGACTGGGTGGAAAAAGGAAGCTCTGCCTCCTGTTGAGGTTCCTGCAGCTGCAAAATGGAAATTCAGAAGCAAACCTTCCCAACAGGTGATATTGGATTATGATTATACATTTACAACGCCATATTGTGGAAGTGAAATGATTGAAGCAGATACAGAGAAGCATGGAAGAGAGCAAAAATGTGAAGAAAGCAATGGTCTCTGTTGGGAGGACAGCAAGGAGAAAATTGATTTAGTCTCACTCTCACTAAAGGAGCCTATCCTCTTTTATGATGAGGTAATCTTATATGAGGATGAGCTGGCTGACAATGGCATATCACTTTTAACAGTTAAAGTGAGAGTCATGCCAAGTGGTTGGTTTCTTCTTTTACGTTTCTGGCTTAGAGTTGATGGAGTGCTCATGAGACTGAGGGACACTCGTATGCATTGCATATTTAGCAACAGTGAAAATCCAATAATTCTTCGAGAAAGTTGCTGGAGGGAGGCTACGTTTCAAGCTCTCGCTGAAGTAAGAGTTCATTGGCTATTGCATGCTAAGAAAGGATACCCGTCTGATTCTGCGGCCTATAACGATCCAAGTGTCATCTGCGACAGACTCCAGATTATTATGCAGAAAACCCAAAAGCTCAGAGTCTCTGGTAAATTATAA MEVEPDEKELKAAGAQLLPDGRRGLRIHGWEIETQKRSILTSSNFEQWEQKLQTSHLPEMVFGDSLLVLKHFETGVQIYFNAFDALTGWKKEALPPVEVPAAAKWKFRSKPSQQVILDYDYTFTTPYCGSEMIEADTEKHGREQKCEESNGLCWEDSKEKIDLVSLSLKEPILFYDEVILYEDELADNGISLLTVKVRVMPSGWFLLLRFWLRVDGVLMRLRDTRMHCIFSNSENPIILRESCWREATFQALAEVRVHWLLHAKKGYPSDSAAYNDPSVICDRLQIIMQKTQKLRVSGKL
BLAST of ClCG02G006560 vs. Swiss-Prot
Match: TIPRL_DICDI (TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36 Identity = 97/277 (35.02%), Postives = 154/277 (55.60%), Query Frame = 1
BLAST of ClCG02G006560 vs. Swiss-Prot
Match: TIPRL_XENLA (TIP41-like protein OS=Xenopus laevis GN=tiprl PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31 Identity = 93/268 (34.70%), Postives = 148/268 (55.22%), Query Frame = 1
BLAST of ClCG02G006560 vs. Swiss-Prot
Match: TIPRL_HUMAN (TIP41-like protein OS=Homo sapiens GN=TIPRL PE=1 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 5.3e-31 Identity = 86/229 (37.55%), Postives = 131/229 (57.21%), Query Frame = 1
BLAST of ClCG02G006560 vs. Swiss-Prot
Match: TIPRL_MOUSE (TIP41-like protein OS=Mus musculus GN=Tiprl PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 1
BLAST of ClCG02G006560 vs. Swiss-Prot
Match: TIPRL_RAT (TIP41-like protein OS=Rattus norvegicus GN=Tiprl PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 1
BLAST of ClCG02G006560 vs. TrEMBL
Match: A0A0A0K6E3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071610 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 2.2e-156 Identity = 276/300 (92.00%), Postives = 280/300 (93.33%), Query Frame = 1
BLAST of ClCG02G006560 vs. TrEMBL
Match: D7SXV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00270 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 7.3e-128 Identity = 227/296 (76.69%), Postives = 253/296 (85.47%), Query Frame = 1
BLAST of ClCG02G006560 vs. TrEMBL
Match: A0A067DYL9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022343mg PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 5.8e-125 Identity = 219/300 (73.00%), Postives = 256/300 (85.33%), Query Frame = 1
BLAST of ClCG02G006560 vs. TrEMBL
Match: V4SGI2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028970mg PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 7.5e-125 Identity = 219/300 (73.00%), Postives = 255/300 (85.00%), Query Frame = 1
BLAST of ClCG02G006560 vs. TrEMBL
Match: A0A067E9P0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022343mg PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.7e-124 Identity = 218/298 (73.15%), Postives = 255/298 (85.57%), Query Frame = 1
BLAST of ClCG02G006560 vs. TAIR10
Match: AT4G34270.1 (AT4G34270.1 TIP41-like family protein) HSP 1 Score: 401.0 bits (1029), Expect = 6.5e-112 Identity = 197/300 (65.67%), Postives = 233/300 (77.67%), Query Frame = 1
BLAST of ClCG02G006560 vs. NCBI nr
Match: gi|449438345|ref|XP_004136949.1| (PREDICTED: TIP41-like protein [Cucumis sativus]) HSP 1 Score: 559.7 bits (1441), Expect = 3.1e-156 Identity = 276/300 (92.00%), Postives = 280/300 (93.33%), Query Frame = 1
BLAST of ClCG02G006560 vs. NCBI nr
Match: gi|659110028|ref|XP_008455010.1| (PREDICTED: TIP41-like protein [Cucumis melo]) HSP 1 Score: 558.9 bits (1439), Expect = 5.3e-156 Identity = 279/300 (93.00%), Postives = 281/300 (93.67%), Query Frame = 1
BLAST of ClCG02G006560 vs. NCBI nr
Match: gi|731383962|ref|XP_010647952.1| (PREDICTED: TIP41-like protein [Vitis vinifera]) HSP 1 Score: 464.9 bits (1195), Expect = 1.0e-127 Identity = 227/296 (76.69%), Postives = 253/296 (85.47%), Query Frame = 1
BLAST of ClCG02G006560 vs. NCBI nr
Match: gi|641828810|gb|KDO47948.1| (hypothetical protein CISIN_1g022343mg [Citrus sinensis]) HSP 1 Score: 455.3 bits (1170), Expect = 8.3e-125 Identity = 219/300 (73.00%), Postives = 256/300 (85.33%), Query Frame = 1
BLAST of ClCG02G006560 vs. NCBI nr
Match: gi|567860454|ref|XP_006422881.1| (hypothetical protein CICLE_v10028970mg [Citrus clementina]) HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124 Identity = 219/300 (73.00%), Postives = 255/300 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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