ClCG02G006450 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTACCATTTAATCGTCCTAGCTTTACTTATAACTCTATCTTCTATTAAACCCACAAACTCCCTTGAGTTCTCCGTCACCAACACCGCCGTAAACACGGCCGGCGGCATCCGTTTCGACCTCGAAATCGGAACTTCCACCACAGAGGATACTCTAAAAAAAGCCGCCGATTTCATATTCAAAATCTTCCAACAATTCAATGACACCGATCGAAAGACCGTTCACCACATCTGTCTCTTCATCGATGCCAATTACGACACCATTTCCTACACTTCTGGCACCGACATCTTCATCGCCGCTAACCACATCGCTACATTTTCCGGCGACCTAAGGAACGAGGTCGCCGGAATTTTGTACCAGCAGCTGGCCCACGTGTGGCAGTGGACTGGCAACGGTTCGGCGCCGGCCGGGCTGATCGAAGGGGTGGCGGAATTTGTGAGGCTGAAATCTGGATTTGTCTCCAGAGAGTGGGCGGCAGCGGGAGATGGTGATCGGTGGGATGAGGGCGGCGGCGGGGTGACGGCGAGGTTTTTGGAGTATTTGGAGGGGTTGGGGAGTGGGTTCGTGGGGGAGCTTAATTGGAAAATGAGAAATGGTTATACTGAAGATTATTTTGTGGAGCTTATGGTGGTGACGGCCAACGAACTTTGGGCGGAGTACAAGGCGGAGTACGGCAAAATGATTAATACTAATTAG ATGGCTTCCTACCATTTAATCGTCCTAGCTTTACTTATAACTCTATCTTCTATTAAACCCACAAACTCCCTTGAGTTCTCCGTCACCAACACCGCCGTAAACACGGCCGGCGGCATCCGTTTCGACCTCGAAATCGGAACTTCCACCACAGAGGATACTCTAAAAAAAGCCGCCGATTTCATATTCAAAATCTTCCAACAATTCAATGACACCGATCGAAAGACCGTTCACCACATCTGTCTCTTCATCGATGCCAATTACGACACCATTTCCTACACTTCTGGCACCGACATCTTCATCGCCGCTAACCACATCGCTACATTTTCCGGCGACCTAAGGAACGAGGTCGCCGGAATTTTGTACCAGCAGCTGGCCCACGTGTGGCAGTGGACTGGCAACGGTTCGGCGCCGGCCGGGCTGATCGAAGGGGTGGCGGAATTTGTGAGGCTGAAATCTGGATTTGTCTCCAGAGAGTGGGCGGCAGCGGGAGATGGTGATCGGTGGGATGAGGGCGGCGGCGGGGTGACGGCGAGGTTTTTGGAGTATTTGGAGGGGTTGGGGAGTGGGTTCGTGGGGGAGCTTAATTGGAAAATGAGAAATGGTTATACTGAAGATTATTTTGTGGAGCTTATGGTGGTGACGGCCAACGAACTTTGGGCGGAGTACAAGGCGGAGTACGGCAAAATGATTAATACTAATTAG ATGGCTTCCTACCATTTAATCGTCCTAGCTTTACTTATAACTCTATCTTCTATTAAACCCACAAACTCCCTTGAGTTCTCCGTCACCAACACCGCCGTAAACACGGCCGGCGGCATCCGTTTCGACCTCGAAATCGGAACTTCCACCACAGAGGATACTCTAAAAAAAGCCGCCGATTTCATATTCAAAATCTTCCAACAATTCAATGACACCGATCGAAAGACCGTTCACCACATCTGTCTCTTCATCGATGCCAATTACGACACCATTTCCTACACTTCTGGCACCGACATCTTCATCGCCGCTAACCACATCGCTACATTTTCCGGCGACCTAAGGAACGAGGTCGCCGGAATTTTGTACCAGCAGCTGGCCCACGTGTGGCAGTGGACTGGCAACGGTTCGGCGCCGGCCGGGCTGATCGAAGGGGTGGCGGAATTTGTGAGGCTGAAATCTGGATTTGTCTCCAGAGAGTGGGCGGCAGCGGGAGATGGTGATCGGTGGGATGAGGGCGGCGGCGGGGTGACGGCGAGGTTTTTGGAGTATTTGGAGGGGTTGGGGAGTGGGTTCGTGGGGGAGCTTAATTGGAAAATGAGAAATGGTTATACTGAAGATTATTTTGTGGAGCTTATGGTGGTGACGGCCAACGAACTTTGGGCGGAGTACAAGGCGGAGTACGGCAAAATGATTAATACTAATTAG MASYHLIVLALLITLSSIKPTNSLEFSVTNTAVNTAGGIRFDLEIGTSTTEDTLKKAADFIFKIFQQFNDTDRKTVHHICLFIDANYDTISYTSGTDIFIAANHIATFSGDLRNEVAGILYQQLAHVWQWTGNGSAPAGLIEGVAEFVRLKSGFVSREWAAAGDGDRWDEGGGGVTARFLEYLEGLGSGFVGELNWKMRNGYTEDYFVELMVVTANELWAEYKAEYGKMINTN
BLAST of ClCG02G006450 vs. TrEMBL
Match: V4SBG5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029208mg PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.0e-60 Identity = 112/228 (49.12%), Postives = 160/228 (70.18%), Query Frame = 1
BLAST of ClCG02G006450 vs. TrEMBL
Match: B9RY80_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0811140 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 6.6e-60 Identity = 110/226 (48.67%), Postives = 161/226 (71.24%), Query Frame = 1
BLAST of ClCG02G006450 vs. TrEMBL
Match: V4RP75_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030248mg PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 109/228 (47.81%), Postives = 157/228 (68.86%), Query Frame = 1
BLAST of ClCG02G006450 vs. TrEMBL
Match: A0A067LBY7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15477 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 6.2e-58 Identity = 105/221 (47.51%), Postives = 155/221 (70.14%), Query Frame = 1
BLAST of ClCG02G006450 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57 Identity = 106/227 (46.70%), Postives = 156/227 (68.72%), Query Frame = 1
BLAST of ClCG02G006450 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54 Identity = 104/229 (45.41%), Postives = 154/229 (67.25%), Query Frame = 1
BLAST of ClCG02G006450 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 192.6 bits (488), Expect = 2.7e-49 Identity = 99/223 (44.39%), Postives = 144/223 (64.57%), Query Frame = 1
BLAST of ClCG02G006450 vs. TAIR10
Match: AT2G15170.1 (AT2G15170.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08 Identity = 30/89 (33.71%), Postives = 56/89 (62.92%), Query Frame = 1
BLAST of ClCG02G006450 vs. NCBI nr
Match: gi|568867323|ref|XP_006486988.1| (PREDICTED: uncharacterized protein LOC102627881 [Citrus sinensis]) HSP 1 Score: 243.0 bits (619), Expect = 5.0e-61 Identity = 112/228 (49.12%), Postives = 161/228 (70.61%), Query Frame = 1
BLAST of ClCG02G006450 vs. NCBI nr
Match: gi|567860512|ref|XP_006422910.1| (hypothetical protein CICLE_v10029208mg [Citrus clementina]) HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60 Identity = 112/228 (49.12%), Postives = 160/228 (70.18%), Query Frame = 1
BLAST of ClCG02G006450 vs. NCBI nr
Match: gi|255555255|ref|XP_002518664.1| (PREDICTED: uncharacterized protein LOC8288103 [Ricinus communis]) HSP 1 Score: 238.8 bits (608), Expect = 9.5e-60 Identity = 110/226 (48.67%), Postives = 161/226 (71.24%), Query Frame = 1
BLAST of ClCG02G006450 vs. NCBI nr
Match: gi|470136561|ref|XP_004304055.1| (PREDICTED: uncharacterized protein LOC101291548 [Fragaria vesca subsp. vesca]) HSP 1 Score: 236.1 bits (601), Expect = 6.1e-59 Identity = 111/229 (48.47%), Postives = 164/229 (71.62%), Query Frame = 1
BLAST of ClCG02G006450 vs. NCBI nr
Match: gi|567860518|ref|XP_006422913.1| (hypothetical protein CICLE_v10030248mg [Citrus clementina]) HSP 1 Score: 234.6 bits (597), Expect = 1.8e-58 Identity = 109/228 (47.81%), Postives = 157/228 (68.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |