ClCG02G005780 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAACGCAAATTTCCATCTCTTCCACCGACCGCTCCGTTGATTGCTTGAATCGAACTGATCTACAGCCGGCTTCTTTCCGAACCCTAATGTCATTGATTCCCCAAAAATCAACGGATCTACTCTTCTACCGCCAGATTTAGGGTTTAAGATTTCTTCTCCTACAATCTTTTTGCCTCAATTTCCCCCAATTTCTTCGATTTCCAAACAAATTGCTGCTACACGCTTGATAATTACCCTCAATATTTGCGTTCAATAAAAGTTCCAGTGTTCATACAATTCTGCGAACATGACTGAGGTATTCATTTCTTCAAATTCCTTGTTGTTTTCCCGCTAATCCTTTTTGTTGGGGTTCTTGCGTATATTTACTTTTTGATGAACTTGAAATAATCTGGAACACCTAAGCTACTTGATCTCCTTCCATGTTTAAAATTCACGTAGCTATCTAATTGTATATGTAATGTAATTCTGGCACCCATCTTGCAGATGTTACGTGGAAATGTTATTCTGATTCAAATACTGGCATTTTCCGCTAGATTTTAATATTGCCGATTTATTGTTTGGTTTGATCGTTTGTTGATCTTTTGTTGAGGATGAGAGAGAGGCAAAGCATTTTGCATATTTTATGTTCTTTCTTTTTTGCTTCATTGATTAGTTATGGAAAGCATGTATAATGTGTAATTCCTGAAAGCTTTTGCATTTGGAAATTGAAATATTGCTTCACGTTTACGTTGGTTGTGATGCCAATTCTCATTTCAATTTTTGGTGCAAGTTATAGTTTGGTTCCATGTATGCATTTTCATATGTACATATGTGTGTGTGTACATATTAACCTTCCATTATGAACTCTATTATTTTGAATTGTTGTCTGTGTTTTGATTCACATATTGGGAATGAAACCTGTGATCTTATATATATATATATATATATTCAGCGTTTGGAAGTTCAGATGTGTGGATAAACATTTATTTTACTTAGAATGATAATCCATGACAGCAAGACTGCTAAAGAGGTTTTTTCTTTTTCTTTTTTTTCTTTTTTTAAATCCCCCTTCCCAGTATTGGGTTAGCCAAGGTAACAAATGGTGCGACTTCTGCAAAATATTTATTTCAAATAATCCGTCCACAATCCGAAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTGCCAAAAAGCTTGCAAACATGAGAAAAGAGAATGCTGCCAAGGACAAAGAACAAAAGGAAGCAGTACGTGCCATTGAGCAGATTGAGGCAGTAAGTGAATGAACATTCTATTCATTGTATCTTTTTTTTTTTTTTTTTTTTTTTGGCAAATAAAAATTCATATAAAAACAGAATCTAAGACATCACTCAACGTTTTCAACATAAAAAATTTGAATTTCTTTCAATTAAATGCATCTAGGTGGTGTCACATTGCATAAAGGATATTATTATATTATGCCTCAGTTACTGGGAACTCAAAGGCAACATCTTTGCCACAAAGCTTCCTGCAAACTGCAGCGAAACTCTCCAACTTGTACTCGGTGTTGTTCCACTCCTTTGGTTCCAAGAAAACCTTCTCGTTTTTTGATCCGTCAACCCTGTATCTGGTTTGTTTCCCCACAATCTCTGCAGGCAAAAGAATATCTTTGTTGATGACTAAGTATAGTAGTATGCATCTTTTCATCAAAAAAGAAATATAGTAGTATGTGTCTGTTTTAACTTTCAAATCTTGGGGGCTTGGTTCAATTCAGAAGTATTAAAGTAAGCCTTAATGTACTAAAAGTTATGAATTCTCATGTCAACTTTATTGTAGTTAGAGATTGGTTAAAGACATAAAGTTAAATTATCTGCTTGCTTCGCATCAGTACTGCAAAGGAACCAAGCTGTTTACATGAATCCTTAATCTTTAGCTTAACAAAGGTTAGCTTATTAGTGAATTGTGCAAGATGAATGTAGTTTCTGCTTTGAATTTGACCTGTTAATTTCGTGTAGTTTCCCTAACAGGAGTTCTTAAAATCTAATTGTTGTATGTTGATTATTACACTTGAGTCTTGAGTATATAATGTGGGTTCTTGAGTCTGATGTACTTGTACATGCCTAGTAAGAATAGATAGTAATGTCCTACTATAAATAATTTCTCACGGTTGATTTTTCTTTCTAGAGTAAGGATTCTTTTGAGTATCTTATCCAGAAAAACAAAAAAGGATCCTTTCTAAGCATGGTTGTCCACATAACGAGTATGCCAATCTCTGGCGACTTTCTTATTTAAGGAGTTTGTTTTAATGGGATTGTGATATGGATACTTTTAACAATGGTAAAGAAGAGAATTGAAGTTGCTGAAACTTTAAATAACAGGGATAAGTGCCAAATTTTTAAGTTCACGCAGAGTCCTCTAAGTGTATGGCCTCAATATGTTCATCGTGTATGAGCAAGAAGAATAGTGTGCTTAATCCATGAAACCATCATGGGTTGGCCTAGTGGTAAATAAGGGGGGTATGACCTTGATAAAGGGGCTAAGAGGTCATGGGTTCAGTCCATGGTGGTCACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGGCACCCAAATTTTGTAGGGTCAGGCGGGTTGTTCTATGAGATTAGTCGAGGTGCGTGTAAGTTGGCTCGGACACTCATGGATATAAAAAAAGTGTGTTTAATCCAATTTTTCTCTCAATTCTGCAGAAAGCCAATCGTAGTTATCAGAAGGACGTAGCAAATTTACGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCATGAAAATGGTGAAGAGAGTAAGTACTGTAGAGTTGCAATTTATTTGTTTTAAGAAATGCCCTTCTATTTCTATCTCTCTCCAGAACTACCTGAAAATTAATGCCTTATGTTTGATGTGAATTTGAGCATCTGTTGACAATGCTCTGAGAAATATCATTCCATTGATATTCTTTTGTGACAACACTAAATTCCTTGCTTTTTTGTGGTGCTCAAAAAATAGGAATTTCTTTTGTAATTATAGCTTGTCCATGATTCAAATGAATTGGAAAGCTCTCTTGTAGGCGTTTTGTTGGGTGAGAGTTTTTTCTTCTCCTTTGCCTTTAGGTTGTTTTGTTTTGTGCCTTTTTCTCATACTTCATAATATACTTCCTTTTAAAAAAAAAGTTGATCTACTTAAGTGAAAGGTCTATGTAATGGGACATAATATTATGTGCATATTTATTATGCATGGGTGTTTATATAGATAATCAATAAATTGGGCCTTCCATTGTTCAGGACACTCCTATATCGGTGTAAGGGTTTATATCAATTTATTGGTTAAGGAACATGTCATGCATTATTGTTGTAAGTTCTAACCACTAACAACTTCAGTATGAGACCAGAAGGCTGGATAAATTATTTGTGTTTTTGTTTTGTTTCTCTGTGCTTTTCACTTCAAGTGGTAAAGAAAAGTCTTCTTTTTGCTTTGGTAAGAAACAAGAGATTCCCTTAATAAAAAAATGAAGGAAGAAGGGACAGGAAGACACATTTTATATTCAATGTTTCTTTGATCCATCAACTTATCCATTTGGATAATTCTTTTCTTTTACCCTTTGTGAGCCTGGTACTGATCATTATCATTTATTATCTTCTTGATCGTGTTCTTCAAACTGATACAGCTCCCAATGATGACAGAATGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTTTACTATGATTCAAGTTCAGGCTTCTACTACTCTGATGCCATTGGTACTGATTGGTTTTTGGGAAGATGAACTTTGAGCTTCTATCTTTTACATCTTAGAATACGACTATACAAGTATTTGTTGCTTACCAAGTTAGTTGTTTGCAACAGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAATTCTTTTTGAACTCCAAACACAAGAAACCAGTTTTAGCAAAGCCATCATCAGCCTCTGCAAGTGCAGATATAAAAGATAAAAATGTGGATAAAGGCGAAAGTGGGCCGCCGCCTGGGTTAGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCTCCTTCATCGATTGCTGTTGGTAAGAGGAAGAGGCCAGATGATAAGCAAAAGGCTATATCTGAAGAAGAAAAAGCTGCACTCAAAGCAAGGGAGGCTGCGAAGAAGAGGGTTGAAAAAAGGGAGAAGCCACTTCTCGGCCTCTACAAATTGCCTTGAAATAGGCTGTTGCTCTCAAGTAAATTTCTCTACCATCTTAAATTTGCAACCTCCACCCTCTCCAACCTGTAAACTGATTTTTCTCTTTATGATTATATAGATTGCTTAACATGAGCGGGAAGAGTATTACTTTATGGAACTTCCCAAAGCTTTACAAGTTCTCTATCACTCTGTTATTGTTGTATCTCGCTCTGCTTTATTGTGGGGCTTACATGCATTCATCACCAGGAATATGTGGGGCTGATATAGTCTAGATACTTGCTCCATCCATGTGTGCTTGGTTACTGAAAAGATGAGAAACGTTTGAGGGAAGAAAATACATAGGCAATCAATTTGCAGGCATGAAGTGATCTTCCTTTTTCTTTGGTTCTGTTTGGTTACAGTTACGATCGATCAGAATCGTGTACTGTCAAAAGCCATGTGAAGGGAAACTCCCTCGTATCGGATACGGCGTTATCTCTCAGTTCAGAAATCAAGGCTTAGACAAGGTGAAATTGCAGTTAAAGAGGAAAACAGAAGATACTACTTGCATAAATTGTATTTGGAGCAGTAATATTTGTCATTAATAATTCAGCCCTTGCTTGGTTTTTCTTTCTATTCAGGATAATTGAGAGCATGAATCCTAGATGAACTAATTTTTTTGTCAGCTCATCCATCACAAAAGGACTTCAACTGGTTTGTGCTGATTTGTTGTATATAGAGTAATGTCAGTCATCAACCCCTTGTTTTATTTCTGCATTTTTTCATTGCATTTGTGTTGTAATTTGTAAGTGATCCTCTCATGCTTTATCTTTCATACTAATTCTCATTCAGGTAGCAAAGTAGAGCACCATGATTGACCAACTATTTTGGGGAAATCAAGTTCTGAATTCATATCTTTATAGCTACTCACTTGATGCGAA TAGAAACGCAAATTTCCATCTCTTCCACCGACCGCTCCGTTGATTGCTTGAATCGAACTGATCTACAGCCGGCTTCTTTCCGAACCCTAATGTCATTGATTCCCCAAAAATCAACGGATCTACTCTTCTACCGCCAGATTTAGGGTTTAAGATTTCTTCTCCTACAATCTTTTTGCCTCAATTTCCCCCAATTTCTTCGATTTCCAAACAAATTGCTGCTACACGCTTGATAATTACCCTCAATATTTGCGTTCAATAAAAGTTCCAGTGTTCATACAATTCTGCGAACATGACTGAGTATTGGGTTAGCCAAGGTAACAAATGGTGCGACTTCTGCAAAATATTTATTTCAAATAATCCGTCCACAATCCGAAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTGCCAAAAAGCTTGCAAACATGAGAAAAGAGAATGCTGCCAAGGACAAAGAACAAAAGGAAGCAGTACGTGCCATTGAGCAGATTGAGGCAGTAATTACTGGGAACTCAAAGGCAACATCTTTGCCACAAAGCTTCCTGCAAACTGCAGCGAAACTCTCCAACTTGTACTCGGTGTTGTTCCACTCCTTTGGTTCCAAGAAAACCTTCTCGTTTTTTGATCCGTCAACCCTGTATCTGAAGGACGTAGCAAATTTACGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCATGAAAATGGTGAAGAGAAATGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTTTACTATGATTCAAGTTCAGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAATTCTTTTTGAACTCCAAACACAAGAAACCAGTTTTAGCAAAGCCATCATCAGCCTCTGCAAGTGCAGATATAAAAGATAAAAATGTGGATAAAGGCGAAAGTGGGCCGCCGCCTGGGTTAGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCTCCTTCATCGATTGCTGTTGGTAAGAGGAAGAGGCCAGATGATAAGCAAAAGGCTATATCTGAAGAAGAAAAAGCTGCACTCAAAGCAAGGGAGGCTGCGAAGAAGAGGGTTGAAAAAAGGGAGAAGCCACTTCTCGGCCTCTACAAATTGCCTTGAAATAGGCTGTTGCTCTCAAATTGCTTAACATGAGCGGGAAGAGTATTACTTTATGGAACTTCCCAAAGCTTTACAAGTTCTCTATCACTCTGTTATTGTTGTATCTCGCTCTGCTTTATTGTGGGGCTTACATGCATTCATCACCAGGAATATGTGGGGCTGATATAGTCTAGATACTTGCTCCATCCATGTGTGCTTGGTTACTGAAAAGATGAGAAACGTTTGAGGGAAGAAAATACATAGGCAATCAATTTGCAGGCATGAAGTGATCTTCCTTTTTCTTTGGTTCTGTTTGGTTACAGTTACGATCGATCAGAATCGTGTACTGTCAAAAGCCATGTGAAGGGAAACTCCCTCGTATCGGATACGGCGTTATCTCTCAGTTCAGAAATCAAGGCTTAGACAAGGATAATTGAGAGCATGAATCCTAGATGAACTAATTTTTTTGTCAGCTCATCCATCACAAAAGGACTTCAACTGGTTTGTGCTGATTTGTTGTATATAGAGTAATGTCAGTCATCAACCCCTTGTTTTATTTCTGCATTTTTTCATTGCATTTGTGTTGTAATTTGTAAGTGATCCTCTCATGCTTTATCTTTCATACTAATTCTCATTCAGGTAGCAAAGTAGAGCACCATGATTGACCAACTATTTTGGGGAAATCAAGTTCTGAATTCATATCTTTATAGCTACTCACTTGATGCGAA ATGACTGAGTATTGGGTTAGCCAAGGTAACAAATGGTGCGACTTCTGCAAAATATTTATTTCAAATAATCCGTCCACAATCCGAAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTGCCAAAAAGCTTGCAAACATGAGAAAAGAGAATGCTGCCAAGGACAAAGAACAAAAGGAAGCAGTACGTGCCATTGAGCAGATTGAGGCAGTAATTACTGGGAACTCAAAGGCAACATCTTTGCCACAAAGCTTCCTGCAAACTGCAGCGAAACTCTCCAACTTGTACTCGGTGTTGTTCCACTCCTTTGGTTCCAAGAAAACCTTCTCGTTTTTTGATCCGTCAACCCTGTATCTGAAGGACGTAGCAAATTTACGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCATGAAAATGGTGAAGAGAAATGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTTTACTATGATTCAAGTTCAGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAATTCTTTTTGAACTCCAAACACAAGAAACCAGTTTTAGCAAAGCCATCATCAGCCTCTGCAAGTGCAGATATAAAAGATAAAAATGTGGATAAAGGCGAAAGTGGGCCGCCGCCTGGGTTAGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCTCCTTCATCGATTGCTGTTGGTAAGAGGAAGAGGCCAGATGATAAGCAAAAGGCTATATCTGAAGAAGAAAAAGCTGCACTCAAAGCAAGGGAGGCTGCGAAGAAGAGGGTTGAAAAAAGGGAGAAGCCACTTCTCGGCCTCTACAAATTGCCTTGA MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKKLANMRKENAAKDKEQKEAVRAIEQIEAVITGNSKATSLPQSFLQTAAKLSNLYSVLFHSFGSKKTFSFFDPSTLYLKDVANLREARDSHALPVDVHENGEEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLAKPSSASASADIKDKNVDKGESGPPPGLVVSASLNPKRSVKGAPSSIAVGKRKRPDDKQKAISEEEKAALKAREAAKKRVEKREKPLLGLYKLP
BLAST of ClCG02G005780 vs. Swiss-Prot
Match: ZOP1_ARATH (Zinc finger protein ZOP1 OS=Arabidopsis thaliana GN=ZOP1 PE=1 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-63 Identity = 142/298 (47.65%), Postives = 186/298 (62.42%), Query Frame = 1
BLAST of ClCG02G005780 vs. Swiss-Prot
Match: WBP4_RAT (WW domain-binding protein 4 OS=Rattus norvegicus GN=Wbp4 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10 Identity = 27/70 (38.57%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of ClCG02G005780 vs. Swiss-Prot
Match: WBP4_HUMAN (WW domain-binding protein 4 OS=Homo sapiens GN=WBP4 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10 Identity = 27/70 (38.57%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of ClCG02G005780 vs. Swiss-Prot
Match: WBP4_MOUSE (WW domain-binding protein 4 OS=Mus musculus GN=Wbp4 PE=1 SV=4) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10 Identity = 26/70 (37.14%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of ClCG02G005780 vs. Swiss-Prot
Match: WBP4_CHICK (WW domain-binding protein 4 OS=Gallus gallus GN=WBP4 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1
BLAST of ClCG02G005780 vs. TrEMBL
Match: A0A0A0K4T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074280 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.8e-102 Identity = 200/296 (67.57%), Postives = 217/296 (73.31%), Query Frame = 1
BLAST of ClCG02G005780 vs. TrEMBL
Match: M5VKZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010352mg PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88 Identity = 173/295 (58.64%), Postives = 211/295 (71.53%), Query Frame = 1
BLAST of ClCG02G005780 vs. TrEMBL
Match: W9RY93_9ROSA (WW domain-binding protein 4 OS=Morus notabilis GN=L484_027564 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 2.3e-81 Identity = 166/292 (56.85%), Postives = 204/292 (69.86%), Query Frame = 1
BLAST of ClCG02G005780 vs. TrEMBL
Match: M5VLQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010352mg PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.9e-75 Identity = 158/294 (53.74%), Postives = 191/294 (64.97%), Query Frame = 1
BLAST of ClCG02G005780 vs. TrEMBL
Match: A9PJ87_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 7.1e-75 Identity = 160/296 (54.05%), Postives = 195/296 (65.88%), Query Frame = 1
BLAST of ClCG02G005780 vs. TAIR10
Match: AT1G49590.1 (AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 245.0 bits (624), Expect = 5.9e-65 Identity = 142/298 (47.65%), Postives = 186/298 (62.42%), Query Frame = 1
BLAST of ClCG02G005780 vs. TAIR10
Match: AT3G54230.2 (AT3G54230.2 suppressor of abi3-5) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06 Identity = 35/137 (25.55%), Postives = 57/137 (41.61%), Query Frame = 1
HSP 2 Score: 45.8 bits (107), Expect = 5.3e-05 Identity = 36/166 (21.69%), Postives = 69/166 (41.57%), Query Frame = 1
BLAST of ClCG02G005780 vs. NCBI nr
Match: gi|659109879|ref|XP_008454929.1| (PREDICTED: uncharacterized protein LOC103495224 [Cucumis melo]) HSP 1 Score: 384.0 bits (985), Expect = 2.3e-103 Identity = 203/296 (68.58%), Postives = 217/296 (73.31%), Query Frame = 1
BLAST of ClCG02G005780 vs. NCBI nr
Match: gi|778725157|ref|XP_011658907.1| (PREDICTED: uncharacterized protein C18H10.07 [Cucumis sativus]) HSP 1 Score: 380.6 bits (976), Expect = 2.6e-102 Identity = 200/296 (67.57%), Postives = 217/296 (73.31%), Query Frame = 1
BLAST of ClCG02G005780 vs. NCBI nr
Match: gi|645262121|ref|XP_008236621.1| (PREDICTED: RNA-binding protein 5 [Prunus mume]) HSP 1 Score: 336.7 bits (862), Expect = 4.2e-89 Identity = 174/295 (58.98%), Postives = 213/295 (72.20%), Query Frame = 1
BLAST of ClCG02G005780 vs. NCBI nr
Match: gi|694332726|ref|XP_009356986.1| (PREDICTED: RNA-binding protein 5 [Pyrus x bretschneideri]) HSP 1 Score: 335.1 bits (858), Expect = 1.2e-88 Identity = 176/295 (59.66%), Postives = 215/295 (72.88%), Query Frame = 1
BLAST of ClCG02G005780 vs. NCBI nr
Match: gi|595793739|ref|XP_007200618.1| (hypothetical protein PRUPE_ppa010352mg [Prunus persica]) HSP 1 Score: 334.3 bits (856), Expect = 2.1e-88 Identity = 173/295 (58.64%), Postives = 211/295 (71.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |