ClCG02G003110 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAATGAACATCAAAGTTAAAATTGTTTTTTTGAATCGAAATTATCACTTCTTTTTCAATCTAGAGATCAAATTTTCGAGGGTAACAGAATTGTTCTTCATCTCGAATGGAGAAACAAGATGTGTCGTTCTCAAATTTTGTGTTGATTGAGCACTGAAGATTCCGAAAGATTAGGGTTCAGACTTGCGCCGGAAGAAGATGAGGATCAACAATCGCCGCGGCGGAAGGTCCAAGCCTAAGCCTTCCCCGCGTTCCGCTGCTTCTACTCCGTCGCCTATGGCGTCTCCGCCCCTCCCCGACCAGGTTAGTATTCACTTCTCTTTCCTTATAGAAATGGAGCCATTTTCTTCTTCTTCTCTCAAAACTAGGTTGTTTCATTGCGCTATTGCTTTTCGTTACTGAAACTGTGATCCACGATGACACTATTTGTTACTTTCTTGGATTTTTCTAAGAAAAATGTCAATATGCCTAATTTTTGTCTCAACTAGAATTTTTTCTTTACAAATTCGAAGAAAGGGAAGAGAATGTTTTTTGAAAGTATCTTTGCTGAAAAATTGATGGGTTTGTAACTGGTCAGGATGTACCATATGCAGAAGATAATACTGTGCATGAGGCATCAAGTAAGGAAGCTAACGATATGTTAGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGTGACTTATTGGTTTGTACTGAAATTGGTTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGCGAGCCTTCGTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGCGAGCGTTATCTGATTTCATTGATACTGGGATGGTTGGTGGTGGCAATTCCCCGCAGATGGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTCAACTTGTGGAGTGGATGTGGACCAGCCTAATCATGGGAGTCATTTGGGCAAGGAGAGTTTGCAAGATCAGGATACGCAGGTTGAGCAAAATCAGAGTAATGAAGGGGAGGAATGTGTGAGAACGGAAGGAGATCTTCAACCAACGTCAATGTTGGGGCTTAACAGCGAAAATCATGATGGTCCTATTGTGTCTAATGTTGGCAACAACAGTCATTCAACTCCTGTAGTTCAGCCGTGTGAGGATTCTATGAATGAAGAAACTTGTGAGGGTGACACATCGGGAACACATCAGGTTGGAAGTTTAGAAGATAAAGAAGATGGGAAAATGATGGACAAAGAAAACTTAAGGTCTGACGACATTCAGGATGACGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGCGACTGCTCGAGAACCTCAAGACAAAGATGATGGTGGAGAACAAATCCAACCCGACAACGAGAGGATGCTTGACGATATCATTCTTACATCTGGAAATAATGATTTGAAGAGTGAAACAACTGTGAAGAAAAGGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAGTTCTCCTAGAAAGTCATTGCGTCTACGAACTCCAGATCTGGGCAAAAAGTCACCTCATATACAAACTCCAGATCTGGGCAAAAAGTCACCTCGTATACGAACTCCAGAACCTAGGAAAAAGTCACCTGATATACAAACTCCAAAACCTGGGAAAGATCATGCAATCAAAATTGAGAAAGTATCTGTTTCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAATCAATTGTAAGTTCTTTCTAGGCTATCATACAGTTTGTATATTACTGGATTGCAGTATGTTGGCGGGTGTCATTCAGCAGTTTTTGATCATCAAAAGTAATTACAACTGTCATTTCCCAATTTGCAGCAAAAAATTGGACTTTCATGGTGGGAAGCGTAAGAGAATGCTTTGGTCTGTTGAAGAGGAGGACATGTTGAAGGTACCTAGTTTATTAGTTGATATTAGGATGTCTTGGGCTTGGCATCTTTAATTTTTCCAGTTGTTTTTGGTTTTTCTTTTCCTTCAAATCTTGGTCACAAAATATTTAGATCTTGCAGAAGGGGAAATAAAGATAATAAAATGAAATTATGGAATAAGCATAACAGTCTTTTGTACCCACCACCATTTGCTTAATATTGAAATCACAATAGAACATACTAGTCTTGCAGTGATAGTATGAAATATTACAAAAGGGGGAGAAAAATCACACCCCCATGAAGGATATGCTTATATTTGAACGCATCTCTCATGATTCCTAGGACGGAAAACTGAGTTTACATCTGAGTGTTAGCAAAGCTGGTTGAAATGATCTACTGTGTAGAAAAGTTCTATTATGATTTCTCTTGCATTCTTTTTAACTGAAAAATCCAGGTAGTGTTGCATATAATACTTAAAAAGGATTCTCAAGTTCATGCTGCTTCATTTTTAGTTGGCACTCAATTCATTTGTGTCATTTACTGATATCTGTGAACTCTTCATCAAATTTGCATTGAAGATAGAGTCGCTCCTTTTTACCCTTTTTAACAATTATAGTCTTTCTAGATCTTCCAATGTAATTCACCTTTTGGTGTCTGGGAGTCTATTAGTTCCCTTCTGAAATGAAGTTGTTTCTCATCTCAAAAATGGAATGTATGTTATGTGCGACCCCTCTGTCTTCTTTAGTGGAGCTAAAAGCTAACTGATATTTTCATGAGAAGAAATGGCCCAATACTACATTTTTTTTCTTAATCATTATTTGCTTCTCCCTGTGCTAACTGAAATTACTTTTTCAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTTCCTTGGAGGAAAATTTTGGAATTCGGTCGTCACGTATTTGATAACACACGTACTCCAGTTGACCTGAAAGATAAATGGAGAAACCTCCAAGCCAAATAGTCTGCTTAATGGATAACTAGTCCAAAAGATTGCAAAAAGGTAACTTCGATAGCAAGTTTTTGGTAACTCCTAAACCTTAATAACAAGTTTATGAAAATTTTGGAATTTGGTCGTCACATATATTTGATGACACACTTTCTTACTCCAGTTGCTTTGAAAGATAAATGGACAAACGTTCTAGCCAAATAGACTATCTTGCTTACTATCCTTGTATGTGCTCGAAGTTCAGTATGAACATGTATCACGATGTTTCGCATTTGCACTATCCAATGATCCATCCCTGCCCCTAAGAAAATGAACACGTTTAATTTGGTTATCATACTTTCAAAATACTTATTTTGGTTCATATAGGATCTGTTTTTATTATTTTTGTCCGTGCACTTACAAACATCTATTCTATATGTGTATGTATATATGTGTATATATATATTGAAGTGATCACTTTGGTCCTTGTTTGTAAAAGTTAAACAAAAATTCTATGTACATGAGACAATAAAATCTTTGACAATATCTTAAGGAATTTTTGTAGGGTAGTGTTGTGTTGAATTTGTGATAGAAAAAATAAGACAATATATAGGGATCAATAAATGTTTCAAAAGTATGGAGACTTGAATTAAACAAATAGTTTAAAGTGCAAAATCAAGATTAGATGTTTAGAAAGTACAAGGACTAGAATAAGATTTGACCAGAATGAAAATGAAATGTGCCTTCAGAGTCTATTTGAAATTTCTAGTTCTTAAAAAGTATTTTTTTTTTCTTGCACTCATTTAAATATTTAGAAATTCATTTCGAACAAGCTGTTAGTCTTGTCCGAGAAATTCTTAATACCACATTTTTTGCAGGTATGTTCTTGACGCGGAGCCATACCATTATGCAGTGTAGGAACCTTTCAATTTGGACGTTGAGAGATCTACATGCTAAAAAGAGAAAGAGAGAGGAAAGAAAGAAAAAGGCCAGTTTGTCTTGAAGACTTTGATTTGTAATGGAAGCTATTGAAGCTATTCTAGAGATAAGGTTGATAAAGGCTGTACAGCTCCTTCTATTGGTCTATAAATGATGGGCAATTGGGGAAGAACGTTATGATTGCCCCGAATTTCTCTCTTTGTTTCAAATTAAATCCTTTGTAGAAGTTTGTAGATGAGGTTCTCCAATTTTGGTCTCTTGGTGTAGGTTGATTTTGTTTGAGTATGCGGAGCCCGCAGAACAAGCAAAGCTCAATTGGTATCAAGTATGTACCATTAACATCAGAAGTATATTTTTTCACTTCACATATTGTAAAA CAAAAAATGAACATCAAAGTTAAAATTGTTTTTTTGAATCGAAATTATCACTTCTTTTTCAATCTAGAGATCAAATTTTCGAGGGTAACAGAATTGTTCTTCATCTCGAATGGAGAAACAAGATGTGTCGTTCTCAAATTTTGTGTTGATTGAGCACTGAAGATTCCGAAAGATTAGGGTTCAGACTTGCGCCGGAAGAAGATGAGGATCAACAATCGCCGCGGCGGAAGGTCCAAGCCTAAGCCTTCCCCGCGTTCCGCTGCTTCTACTCCGTCGCCTATGGCGTCTCCGCCCCTCCCCGACCAGGATGTACCATATGCAGAAGATAATACTGTGCATGAGGCATCAAGTAAGGAAGCTAACGATATGTTAGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGTGACTTATTGGTTTGTACTGAAATTGGTTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGCGAGCCTTCGTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGCGAGCGTTATCTGATTTCATTGATACTGGGATGGTTGGTGGTGGCAATTCCCCGCAGATGGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTCAACTTGTGGAGTGGATGTGGACCAGCCTAATCATGGGAGTCATTTGGGCAAGGAGAGTTTGCAAGATCAGGATACGCAGGTTGAGCAAAATCAGAGTAATGAAGGGGAGGAATGTGTGAGAACGGAAGGAGATCTTCAACCAACGTCAATGTTGGGGCTTAACAGCGAAAATCATGATGGTCCTATTGTGTCTAATGTTGGCAACAACAGTCATTCAACTCCTGTAGTTCAGCCGTGTGAGGATTCTATGAATGAAGAAACTTGTGAGGGTGACACATCGGGAACACATCAGGTTGGAAGTTTAGAAGATAAAGAAGATGGGAAAATGATGGACAAAGAAAACTTAAGGTCTGACGACATTCAGGATGACGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGCGACTGCTCGAGAACCTCAAGACAAAGATGATGGTGGAGAACAAATCCAACCCGACAACGAGAGGATGCTTGACGATATCATTCTTACATCTGGAAATAATGATTTGAAGAGTGAAACAACTGTGAAGAAAAGGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAGTTCTCCTAGAAAGTCATTGCGTCTACGAACTCCAGATCTGGGCAAAAAGTCACCTCATATACAAACTCCAGATCTGGGCAAAAAGTCACCTCGTATACGAACTCCAGAACCTAGGAAAAAGTCACCTGATATACAAACTCCAAAACCTGGGAAAGATCATGCAATCAAAATTGAGAAAGTATCTGTTTCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAATCAATTCAAAAAATTGGACTTTCATGGTGGGAAGCGTAAGAGAATGCTTTGGTCTGTTGAAGAGGAGGACATGTTGAAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTTCCTTGGAGGAAAATTTTGGAATTCGGTCGTCACGTATTTGATAACACACGTACTCCAGTTGACCTGAAAGATAAATGGAGAAACCTCCAAGCCAAATAGTCTGCTTAATGGATAACTAGTCCAAAAGATTGCAAAAAGGTATGTTCTTGACGCGGAGCCATACCATTATGCAGTGTAGGAACCTTTCAATTTGGACGTTGAGAGATCTACATGCTAAAAAGAGAAAGAGAGAGGAAAGAAAGAAAAAGGCCAGTTTGTCTTGAAGACTTTGATTTGTAATGGAAGCTATTGAAGCTATTCTAGAGATAAGGTTGATAAAGGCTGTACAGCTCCTTCTATTGGTCTATAAATGATGGGCAATTGGGGAAGAACGTTATGATTGCCCCGAATTTCTCTCTTTGTTTCAAATTAAATCCTTTGTAGAAGTTTGTAGATGAGGTTCTCCAATTTTGGTCTCTTGGTGTAGGTTGATTTTGTTTGAGTATGCGGAGCCCGCAGAACAAGCAAAGCTCAATTGGTATCAAGTATGTACCATTAACATCAGAAGTATATTTTTTCACTTCACATATTGTAAAA ATGAGGATCAACAATCGCCGCGGCGGAAGGTCCAAGCCTAAGCCTTCCCCGCGTTCCGCTGCTTCTACTCCGTCGCCTATGGCGTCTCCGCCCCTCCCCGACCAGGATGTACCATATGCAGAAGATAATACTGTGCATGAGGCATCAAGTAAGGAAGCTAACGATATGTTAGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGTGACTTATTGGTTTGTACTGAAATTGGTTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGCGAGCCTTCGTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGCGAGCGTTATCTGATTTCATTGATACTGGGATGGTTGGTGGTGGCAATTCCCCGCAGATGGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTCAACTTGTGGAGTGGATGTGGACCAGCCTAATCATGGGAGTCATTTGGGCAAGGAGAGTTTGCAAGATCAGGATACGCAGGTTGAGCAAAATCAGAGTAATGAAGGGGAGGAATGTGTGAGAACGGAAGGAGATCTTCAACCAACGTCAATGTTGGGGCTTAACAGCGAAAATCATGATGGTCCTATTGTGTCTAATGTTGGCAACAACAGTCATTCAACTCCTGTAGTTCAGCCGTGTGAGGATTCTATGAATGAAGAAACTTGTGAGGGTGACACATCGGGAACACATCAGGTTGGAAGTTTAGAAGATAAAGAAGATGGGAAAATGATGGACAAAGAAAACTTAAGGTCTGACGACATTCAGGATGACGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGCGACTGCTCGAGAACCTCAAGACAAAGATGATGGTGGAGAACAAATCCAACCCGACAACGAGAGGATGCTTGACGATATCATTCTTACATCTGGAAATAATGATTTGAAGAGTGAAACAACTGTGAAGAAAAGGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAGTTCTCCTAGAAAGTCATTGCGTCTACGAACTCCAGATCTGGGCAAAAAGTCACCTCATATACAAACTCCAGATCTGGGCAAAAAGTCACCTCGTATACGAACTCCAGAACCTAGGAAAAAGTCACCTGATATACAAACTCCAAAACCTGGGAAAGATCATGCAATCAAAATTGAGAAAGTATCTGTTTCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAATCAATTCAAAAAATTGGACTTTCATGGTGGGAAGCGTAAGAGAATGCTTTGGTCTGTTGAAGAGGAGGACATGTTGAAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTTCCTTGGAGGAAAATTTTGGAATTCGGTCGTCACGTATTTGATAACACACGTACTCCAGTTGACCTGAAAGATAAATGGAGAAACCTCCAAGCCAAATAG MRINNRRGGRSKPKPSPRSAASTPSPMASPPLPDQDVPYAEDNTVHEASSKEANDMLDKIDCFQKDTCTRCDQSGDLLVCTEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNELRRKTMVAKRALSDFIDTGMVGGGNSPQMGEAGKKKADDVSTCGVDVDQPNHGSHLGKESLQDQDTQVEQNQSNEGEECVRTEGDLQPTSMLGLNSENHDGPIVSNVGNNSHSTPVVQPCEDSMNEETCEGDTSGTHQVGSLEDKEDGKMMDKENLRSDDIQDDEIAKDQGQLETPGAHHDEEATAREPQDKDDGGEQIQPDNERMLDDIILTSGNNDLKSETTVKKRRFKTKANRRTDLQNVSSPRKSLRLRTPDLGKKSPHIQTPDLGKKSPRIRTPEPRKKSPDIQTPKPGKDHAIKIEKVSVSRNLKLQPASPNQFKKLDFHGGKRKRMLWSVEEEDMLKEGVQKFSSTANKNLPWRKILEFGRHVFDNTRTPVDLKDKWRNLQAK
BLAST of ClCG02G003110 vs. TrEMBL
Match: A0A0A0K518_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G030500 PE=4 SV=1) HSP 1 Score: 812.4 bits (2097), Expect = 3.2e-232 Identity = 402/510 (78.82%), Postives = 444/510 (87.06%), Query Frame = 1
BLAST of ClCG02G003110 vs. TrEMBL
Match: E6NTZ6_JATCU (JHL20J20.13 protein OS=Jatropha curcas GN=JHL20J20.13 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 168/556 (30.22%), Postives = 260/556 (46.76%), Query Frame = 1
BLAST of ClCG02G003110 vs. TrEMBL
Match: B9GPP3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s00710g PE=4 SV=2) HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52 Identity = 167/534 (31.27%), Postives = 248/534 (46.44%), Query Frame = 1
BLAST of ClCG02G003110 vs. TrEMBL
Match: K7MDG1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G236400 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48 Identity = 159/540 (29.44%), Postives = 243/540 (45.00%), Query Frame = 1
BLAST of ClCG02G003110 vs. TrEMBL
Match: A0A0B2R5V8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_031941 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.8e-48 Identity = 158/539 (29.31%), Postives = 239/539 (44.34%), Query Frame = 1
BLAST of ClCG02G003110 vs. TAIR10
Match: AT5G03780.1 (AT5G03780.1 TRF-like 10) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-19 Identity = 72/258 (27.91%), Postives = 114/258 (44.19%), Query Frame = 1
BLAST of ClCG02G003110 vs. TAIR10
Match: AT1G01150.1 (AT1G01150.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain) HSP 1 Score: 87.4 bits (215), Expect = 2.7e-17 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 1
HSP 2 Score: 48.5 bits (114), Expect = 1.4e-05 Identity = 25/85 (29.41%), Postives = 39/85 (45.88%), Query Frame = 1
BLAST of ClCG02G003110 vs. TAIR10
Match: AT4G12670.1 (AT4G12670.1 Homeodomain-like superfamily protein) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-16 Identity = 81/276 (29.35%), Postives = 124/276 (44.93%), Query Frame = 1
BLAST of ClCG02G003110 vs. TAIR10
Match: AT1G68030.1 (AT1G68030.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 5.2e-08 Identity = 37/148 (25.00%), Postives = 64/148 (43.24%), Query Frame = 1
BLAST of ClCG02G003110 vs. NCBI nr
Match: gi|659124166|ref|XP_008462016.1| (PREDICTED: uncharacterized protein LOC103500488 isoform X1 [Cucumis melo]) HSP 1 Score: 826.2 bits (2133), Expect = 3.1e-236 Identity = 408/510 (80.00%), Postives = 444/510 (87.06%), Query Frame = 1
BLAST of ClCG02G003110 vs. NCBI nr
Match: gi|449453762|ref|XP_004144625.1| (PREDICTED: uncharacterized protein LOC101213119 [Cucumis sativus]) HSP 1 Score: 812.4 bits (2097), Expect = 4.6e-232 Identity = 402/510 (78.82%), Postives = 444/510 (87.06%), Query Frame = 1
BLAST of ClCG02G003110 vs. NCBI nr
Match: gi|659124168|ref|XP_008462017.1| (PREDICTED: uncharacterized protein LOC103500488 isoform X2 [Cucumis melo]) HSP 1 Score: 805.1 bits (2078), Expect = 7.3e-230 Identity = 402/510 (78.82%), Postives = 437/510 (85.69%), Query Frame = 1
BLAST of ClCG02G003110 vs. NCBI nr
Match: gi|802607358|ref|XP_012073760.1| (PREDICTED: uncharacterized protein LOC105635313 isoform X1 [Jatropha curcas]) HSP 1 Score: 220.7 bits (561), Expect = 5.9e-54 Identity = 168/556 (30.22%), Postives = 260/556 (46.76%), Query Frame = 1
BLAST of ClCG02G003110 vs. NCBI nr
Match: gi|566155557|ref|XP_002301900.2| (hypothetical protein POPTR_0002s00710g [Populus trichocarpa]) HSP 1 Score: 214.5 bits (545), Expect = 4.2e-52 Identity = 167/534 (31.27%), Postives = 248/534 (46.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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