ClCG02G002950 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCTGCCGGAGCCGCGGCCTCCGGCGAACTGGAGTTCCGGTGGGACGATGACGCGTGGTACAATGTGACCGTGAAACTCGAAGGCGATGATCTTAGGATCAGTTATTGCGAGTTCGATAAGGAACATGACAATGTCTTCCACGCCAACCATTTCCGGAGCTTATCGGAGTTGAGCGACTTCGAAGCTAGGTTTCGGCCTTTGTCCAGACAGTTGCAGGATTCCGAATGCCCTAACGTCGTCCCTGGAATGCCCGTTTGCGCTTCCCACTCCTCTCGAGCCGATGATGTTCGCTTCTACGATGCTCTTGTGGAAGGGGTTCGTTCCTTTGCTTTGCACTTCTCCTATTGTTTGAGTCTGAGTTCACCGCGGATTCTTTTTGTTTGAAACTTTAGCCTCTTAGTTCCATTAACTTTATCGAGCAGGACCTTATTTAGAAACTTTTTTTTGTGATTTTCCTTCTCATACTGAAGATAGTCTCTGGTTTTTTTGGTTTGTTGCTATTTTGAGGATCTTAGATGGCCTAAGACTGTTCCGTATGCCATAGGATAGTCTGAGTTTTGGAAGGCCTTCATCATGTTTTTTCAGCATGCATGCTTTACAGCCATAATACCATTTACTGTTCTGAAAATAACTTTTTGAACCATTGTATCATGGATTGGCCTAGTGATAACTATGTAGGCACGACCTTGATAAAGGATTTAGGAGTCATAGATTCTATTTATGGTGACCACCTACCTAGGATTTAATATCATACAAGTTTCTTTGACACCTAAATGTTGTAGGGTTAGGCGGGTTGTCCTGTGGGATTAGTTGAGGTGTGCATAAGCTGGCCCAAAAAGGAAAATGAACTTTCCGAAATTATATGGATCAAATATTTCTTTTCCTTAATTTTCTATATGATTGAAACTCCAATCTCTTATTATAACTCTTTTGTTCATTTTAATTCTTAAATTTATAGAACTTCATTTCTTTTTATTATGAATGGTTATAAGCTCAATTAACTAGACCATATTTACATGCAATCAATGATATCTATCTATGAGTGCGATCATACTAGTACTAATATTGTCACAGACAATGACCTTCCTCACATCGATATGATATTGTTCACTTTGGGCATAATGACTTTTATTTTTGGTTTCATCCAAAAGGTTTAATGCCATTGGAGATTTTATCTTTCCTCCTTATATATCCATGATCTTCTCTTTATCTAGCCAACGTGGGACCTTGGTCGTAATCCTAACAATCATCTCCTCTAACAAAGTACCATTGAGTCTCCCCTCAAACAATTATATATTCGTATAATTCGTATCCATTCCAAATCCTTTTCTCTAGAGTCCACCGCCAATCAGATAGAGCTCAACCATGGGTCTTCACCATGTCTACAACTTTCCATGCTCACCACCTAAGGATTCTACCGACATGACTAAGTTAGGATCATGACTCTAATACTACTTGACCCTCCCCATATCTCCACAGTGGCAATGATATTGTCCACTTTGAGCATAAACTCTTGTGATTTTGTTTTTGGTTTCACCCAAAAGGACTCATGCTATTGAAGATAGTGTTCCTCACTTATCTATCCATGATCTTCCCCTTATCTAGCTGATGTGGGACTTTGGTCGCATTCCCAACAAATCCATTGGATCCTATCAAAACTCGACATCTACGGTTAAGTGTGCTTGGCGATAGTAGTACTAAGTTGGTGGTCACTTTAGAAGTCCTTGTGTCGTACCTCTTTTTATTTCTATTTGTTATAATAAAAAAAATCTATCTTTTGAATTGAATATATGAAGCGTATACTCTAATCTAAACAGTGTTTTTCGACATAAGTTGAGGTTTCATTTTATTGCACATTTTAGGCTTTCTTGTGGACATAAGATGAAGAAATAACGTATGAAATGTACTATGGACTTGTATTTTATTTTTGGGCACTAAGTCAGATAATATGGGCATGTTTGAATTAAACCTTTTTATGCATGTTTTAATTATCAATCCCAGAACATATAGTTGATGAAAAATAATATATTGGATTTTTGAAGAATGATCAATTCAAAATTTCTTAGAGTATGAATTCAATTAGAAGCCTTGGCATTTTCATTTTTTCCATGACTCGTGCATTGGTAGGTGGATTATCTTGAACACTCTTATGCAAATGGAGAAGAAGAGTGCTTATGCAACTTTATCCTTTTATGGCAGCATGGTCCAAACTCTGGGAATTTGACATTTGCCAGTATTGCTAACTTGTGTCAAATTCAATTTGATGAAATTAATGACACAGTGTTAGCAACCTTCTTCGCGAAAGTTAGGGAGAAAATCCAAACCAGAATGAATAGAGGTGGTACCTGTTCTGAAGATCGCCTTCTCACCCATAATGACGGTGGTGCTCATCAGAAGGATGAATGCAGCCTAAAATTAAAGCGTCGCCTATCCTTTTTTGAACGCATGGACCAGGTGAGTATTATTTCTAGAGCTCAAGATTTTACTAAGCAATAAGTTATTAAGCTCCAACTTCCACTTACATTGGAGGGCTCCATTTCATTCACCATTTCATTATACTTTTATCAATATTTGATGGCTCTCTCCATTTGTAGGACACACGGCGTGCCAAGCGTTCTTCTGGGGCAGTAGGACTATGGGAAGGTAAAATTTGTTATTTACGGCATGAACCTAACCTTTCGTTATCTCATCAAGTGTGGACAATGTGATCTATGGGGCAAATATTTCTTCTCCACTTGAAACTGTGGTATCTTAATCAATAATAATGCACCATTTAACAGTACTTTTTTAATCACTATTTTGCTTCTTGATTGAACTTCTTTTCCCCCCATAGACCAACAGACTCTCAGTTCCAGAAAAAGTGGGGTGATCGAGCAAGATACTGATATTGGTGGAGTGAAGTATCAGTTCATGATTTTACTTGAGAATCTAGATAAAGAATTGTCTCCAGTAAAACTTGCCAAATTCTTACATGCACAAACATTGATATTACCTCGAGTATACATTTTTCCAAGTTTAACATTTGAGGCGTATGCAAAGGGAGCTGTTGTATTGAATTGCAGAAAGAACTTAGAGAGGTTGTGCGATTTTTTGGATAATCCAGACCATGTCATTTTATCCTCCCAAGGAAGGTAAACTTTTTCACTAAATGAACTTTTTGTACAGATATATTATAAATCATCAAACTTTTCTACGAAATATGCATTTCGCTCTCTCTCTCTGGCTTTGATACCAACTGTCTTGGATTTAATCATTTAGCTCAACTTGATTACAATTCTATGCCTAATTTCTATAAATCCTCGACTGTGGAGATTTGTTTCCATTTTATAGTTTGGGAGTTTTCCACTCATTTTCTGCAGGCCCTTGGTAGTAACCGGAAGAATAGCAGGACGCGAAACTTTTGGGACATTGGCGGCAGGGGCCATGGTGCTAGACTCGGAAGTAAGTTCTTATTAACTCCTTGTTCGTTTTTGTACTAACAGGAGTGGCTCTGTGGATCTCTCATAGGTTCATTTGAAGTTGAATTTAGAAAAATGAAAGAGATGTCCAATTTTTAATTAGTGAAGCAACATGTATCATTCACGCCGAATTCTTAGTATAAATGACGCCTTCAAGTTTCTCCATTCAGATATAATATTAAATTTATCTTTACCTATTAGATTAAGCTTTTGGGTTAATCGGTGATTTAACATGGAATTAGAGCAGTAGGTCTTGTGTTCAAATCCCAACAATACAATGTGATTTCCACTCCCATTAATATTGGTTTTCACTTGTTAGGTCTTCTACGTATTCCAAGCCCACAAGTGAGGGAGAGTGTTAGATAATATAATATTAAATTTACTTTCACCCATCAGCTTAAGTTTTTGGGTCAACATGTGATTTAACATCTCCTAGATAGTTCAACGTGATCTTTTTCAGTTGCAATAAATCAAATTCCATTTCTTGATATAAATCCTTGAACGGAAGTCTTACAAAAATGATGGAAGACAATCTGGAATCGATATTGAACAGGGGCTATAAACCAATTTAGCTTAGGAAGTAATCTAGGAATTTAAGTTGGTATCCTACTTCTGATGGTTGTTGCTGTTCATCTTGATTTGTTACAGAATAAATTTGGTAATGAAAAAGATGGGAGGGTGCGTTGCGAACTGAAGGTTGTGAAAGTAGGAACAAATGAATATTTGACTGCAAAGCACATGAAGGAATTGTTCATGGAGTTTCTTAACCATCAAAGGAGGTTGCACCAAAGATTGGCCATGGAGGAGGGAAAGATCTATTGCAATGGTGCTTTGTAA ATGTTCTCTGCCGGAGCCGCGGCCTCCGGCGAACTGGAGTTCCGGTGGGACGATGACGCGTGGTACAATGTGACCGTGAAACTCGAAGGCGATGATCTTAGGATCAGTTATTGCGAGTTCGATAAGGAACATGACAATGTCTTCCACGCCAACCATTTCCGGAGCTTATCGGAGTTGAGCGACTTCGAAGCTAGGTTTCGGCCTTTGTCCAGACAGTTGCAGGATTCCGAATGCCCTAACGTCGTCCCTGGAATGCCCGTTTGCGCTTCCCACTCCTCTCGAGCCGATGATGTTCGCTTCTACGATGCTCTTGTGGAAGGGGTGGATTATCTTGAACACTCTTATGCAAATGGAGAAGAAGAGTGCTTATGCAACTTTATCCTTTTATGGCAGCATGGTCCAAACTCTGGGAATTTGACATTTGCCAGTATTGCTAACTTGTGTCAAATTCAATTTGATGAAATTAATGACACAGTGTTAGCAACCTTCTTCGCGAAAGTTAGGGAGAAAATCCAAACCAGAATGAATAGAGGTGGTACCTGTTCTGAAGATCGCCTTCTCACCCATAATGACGGTGGTGCTCATCAGAAGGATGAATGCAGCCTAAAATTAAAGCGTCGCCTATCCTTTTTTGAACGCATGGACCAGGACACACGGCGTGCCAAGCGTTCTTCTGGGGCAGTAGGACTATGGGAAGACCAACAGACTCTCAGTTCCAGAAAAAGTGGGGTGATCGAGCAAGATACTGATATTGGTGGAGTGAAGTATCAGTTCATGATTTTACTTGAGAATCTAGATAAAGAATTGTCTCCAGTAAAACTTGCCAAATTCTTACATGCACAAACATTGATATTACCTCGAGTATACATTTTTCCAAGTTTAACATTTGAGGCGTATGCAAAGGGAGCTGTTGTATTGAATTGCAGAAAGAACTTAGAGAGGTTGTGCGATTTTTTGGATAATCCAGACCATGTCATTTTATCCTCCCAAGGAAGGCCCTTGGTAGTAACCGGAAGAATAGCAGGACGCGAAACTTTTGGGACATTGGCGGCAGGGGCCATGGTGCTAGACTCGGAAAATAAATTTGGTAATGAAAAAGATGGGAGGGTGCGTTGCGAACTGAAGGTTGTGAAAGTAGGAACAAATGAATATTTGACTGCAAAGCACATGAAGGAATTGTTCATGGAGTTTCTTAACCATCAAAGGAGGTTGCACCAAAGATTGGCCATGGAGGAGGGAAAGATCTATTGCAATGGTGCTTTGTAA ATGTTCTCTGCCGGAGCCGCGGCCTCCGGCGAACTGGAGTTCCGGTGGGACGATGACGCGTGGTACAATGTGACCGTGAAACTCGAAGGCGATGATCTTAGGATCAGTTATTGCGAGTTCGATAAGGAACATGACAATGTCTTCCACGCCAACCATTTCCGGAGCTTATCGGAGTTGAGCGACTTCGAAGCTAGGTTTCGGCCTTTGTCCAGACAGTTGCAGGATTCCGAATGCCCTAACGTCGTCCCTGGAATGCCCGTTTGCGCTTCCCACTCCTCTCGAGCCGATGATGTTCGCTTCTACGATGCTCTTGTGGAAGGGGTGGATTATCTTGAACACTCTTATGCAAATGGAGAAGAAGAGTGCTTATGCAACTTTATCCTTTTATGGCAGCATGGTCCAAACTCTGGGAATTTGACATTTGCCAGTATTGCTAACTTGTGTCAAATTCAATTTGATGAAATTAATGACACAGTGTTAGCAACCTTCTTCGCGAAAGTTAGGGAGAAAATCCAAACCAGAATGAATAGAGGTGGTACCTGTTCTGAAGATCGCCTTCTCACCCATAATGACGGTGGTGCTCATCAGAAGGATGAATGCAGCCTAAAATTAAAGCGTCGCCTATCCTTTTTTGAACGCATGGACCAGGACACACGGCGTGCCAAGCGTTCTTCTGGGGCAGTAGGACTATGGGAAGACCAACAGACTCTCAGTTCCAGAAAAAGTGGGGTGATCGAGCAAGATACTGATATTGGTGGAGTGAAGTATCAGTTCATGATTTTACTTGAGAATCTAGATAAAGAATTGTCTCCAGTAAAACTTGCCAAATTCTTACATGCACAAACATTGATATTACCTCGAGTATACATTTTTCCAAGTTTAACATTTGAGGCGTATGCAAAGGGAGCTGTTGTATTGAATTGCAGAAAGAACTTAGAGAGGTTGTGCGATTTTTTGGATAATCCAGACCATGTCATTTTATCCTCCCAAGGAAGGCCCTTGGTAGTAACCGGAAGAATAGCAGGACGCGAAACTTTTGGGACATTGGCGGCAGGGGCCATGGTGCTAGACTCGGAAAATAAATTTGGTAATGAAAAAGATGGGAGGGTGCGTTGCGAACTGAAGGTTGTGAAAGTAGGAACAAATGAATATTTGACTGCAAAGCACATGAAGGAATTGTTCATGGAGTTTCTTAACCATCAAAGGAGGTTGCACCAAAGATTGGCCATGGAGGAGGGAAAGATCTATTGCAATGGTGCTTTGTAA MFSAGAAASGELEFRWDDDAWYNVTVKLEGDDLRISYCEFDKEHDNVFHANHFRSLSELSDFEARFRPLSRQLQDSECPNVVPGMPVCASHSSRADDVRFYDALVEGVDYLEHSYANGEEECLCNFILLWQHGPNSGNLTFASIANLCQIQFDEINDTVLATFFAKVREKIQTRMNRGGTCSEDRLLTHNDGGAHQKDECSLKLKRRLSFFERMDQDTRRAKRSSGAVGLWEDQQTLSSRKSGVIEQDTDIGGVKYQFMILLENLDKELSPVKLAKFLHAQTLILPRVYIFPSLTFEAYAKGAVVLNCRKNLERLCDFLDNPDHVILSSQGRPLVVTGRIAGRETFGTLAAGAMVLDSENKFGNEKDGRVRCELKVVKVGTNEYLTAKHMKELFMEFLNHQRRLHQRLAMEEGKIYCNGAL
BLAST of ClCG02G002950 vs. TrEMBL
Match: A0A0A0LGL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875980 PE=4 SV=1) HSP 1 Score: 595.9 bits (1535), Expect = 3.8e-167 Identity = 312/421 (74.11%), Postives = 337/421 (80.05%), Query Frame = 1
BLAST of ClCG02G002950 vs. TrEMBL
Match: W9QFE3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004865 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 7.2e-81 Identity = 176/422 (41.71%), Postives = 244/422 (57.82%), Query Frame = 1
BLAST of ClCG02G002950 vs. TrEMBL
Match: A0A061DU77_THECC (Rubisco methyltransferase family protein OS=Theobroma cacao GN=TCM_002431 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 6.3e-77 Identity = 175/418 (41.87%), Postives = 251/418 (60.05%), Query Frame = 1
BLAST of ClCG02G002950 vs. TrEMBL
Match: A0A067K1E2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18521 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 9.1e-76 Identity = 159/402 (39.55%), Postives = 238/402 (59.20%), Query Frame = 1
BLAST of ClCG02G002950 vs. TrEMBL
Match: A0A0D2PIH6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G098800 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 3.5e-75 Identity = 170/418 (40.67%), Postives = 244/418 (58.37%), Query Frame = 1
BLAST of ClCG02G002950 vs. TAIR10
Match: AT4G25330.1 (AT4G25330.1 unknown protein) HSP 1 Score: 116.3 bits (290), Expect = 4.5e-26 Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 1
BLAST of ClCG02G002950 vs. NCBI nr
Match: gi|659132894|ref|XP_008466441.1| (PREDICTED: uncharacterized protein LOC103503848 isoform X1 [Cucumis melo]) HSP 1 Score: 711.8 bits (1836), Expect = 6.9e-202 Identity = 352/421 (83.61%), Postives = 380/421 (90.26%), Query Frame = 1
BLAST of ClCG02G002950 vs. NCBI nr
Match: gi|778686874|ref|XP_011652462.1| (PREDICTED: uncharacterized protein LOC101219940 isoform X1 [Cucumis sativus]) HSP 1 Score: 705.3 bits (1819), Expect = 6.5e-200 Identity = 352/421 (83.61%), Postives = 378/421 (89.79%), Query Frame = 1
BLAST of ClCG02G002950 vs. NCBI nr
Match: gi|659132896|ref|XP_008466444.1| (PREDICTED: uncharacterized protein LOC103503848 isoform X2 [Cucumis melo]) HSP 1 Score: 645.2 bits (1663), Expect = 7.9e-182 Identity = 328/421 (77.91%), Postives = 356/421 (84.56%), Query Frame = 1
BLAST of ClCG02G002950 vs. NCBI nr
Match: gi|449437404|ref|XP_004136482.1| (PREDICTED: uncharacterized protein LOC101219940 isoform X2 [Cucumis sativus]) HSP 1 Score: 638.6 bits (1646), Expect = 7.4e-180 Identity = 328/421 (77.91%), Postives = 354/421 (84.09%), Query Frame = 1
BLAST of ClCG02G002950 vs. NCBI nr
Match: gi|700204941|gb|KGN60074.1| (hypothetical protein Csa_3G875980 [Cucumis sativus]) HSP 1 Score: 595.9 bits (1535), Expect = 5.5e-167 Identity = 312/421 (74.11%), Postives = 337/421 (80.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |