ClCG02G002570 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G002570
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 2619462 .. 2619797 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

mRNA sequence

ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

Coding sequence (CDS)

ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

Protein sequence

MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Homology
[Close]
BLAST of ClCG02G002570 vs. TrEMBL
Match: A0A0A0K391_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-31
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 26  MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 85
           MYG    GVDGGGRV AVVDG RREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW
Sbjct: 1   MYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 60

Query: 86  VSGEFPRISEVNHLMVSDSMR 107
           VSGEFPRISEVNHLM S+  R
Sbjct: 61  VSGEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of ClCG02G002570 vs. TrEMBL
Match: F6HII7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGG---RREGNSYGFS 60
           MW + AA+RRN  NIRKSPRVADE+M+G       GG +    + G    RR     GFS
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFG-------GGNQAELPIFGRDMERRARGWDGFS 60

Query: 61  MIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            +YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  AVYSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of ClCG02G002570 vs. TrEMBL
Match: A0A061DMU7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-28
Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWR+   +RRNL NI+KSPRVADE+M G GV   +  G    +    R  G+  G S+I 
Sbjct: 1   MWRMLVVLRRNLQNIKKSPRVADENMVG-GVNTNNNNGAEMPIFIDRRPRGSWNGLSVIC 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           S++R P S++SCFSQPHVNG DG+WVS EF +ISE+NHLMVSDSMRYAILM
Sbjct: 61  SVVRAPLSLVSCFSQPHVNGADGVWVSSEFAQISEMNHLMVSDSMRYAILM 110

[Close]
BLAST of ClCG02G002570 vs. TrEMBL
Match: A0A067KF26_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-26
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWR  A +RRN+HN+RKSPRVADESM+  G   ++ G     +           GFS I+
Sbjct: 1   MWRSVARIRRNMHNLRKSPRVADESMF--GGMNINNGTEFPIIFARETAGRQRIGFSAIF 60

Query: 61  SLLRTPFSILSCF-SQPHVNGVDGMWVSG--EFPRISEVNHLMVSDSMRYAILM 112
            ++  PFS+LSCF SQPH NGVDG+WVSG  EF +ISE+NHLMV+DSMRYAILM
Sbjct: 61  RIVLAPFSLLSCFSSQPHANGVDGLWVSGRHEFAQISEMNHLMVNDSMRYAILM 112

[Close]
BLAST of ClCG02G002570 vs. TrEMBL
Match: I3SRB2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWRL AAV RNL N +KS RVADESM+    AG D G R        R + +  GFS+IY
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFE---AGHDRGIR--------RSQHDWSGFSLIY 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           ++L  P SILSC S P  NGVDG WVSGEF +ISE+NH+MV+DSMRYAILM
Sbjct: 61  AILHAPISILSCVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMRYAILM 100

[Close]
BLAST of ClCG02G002570 vs. TAIR10
Match: AT5G35732.1 (AT5G35732.1 unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 6.5e-25
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           M ++ + +RRNL N+RKSPRVAD++      +G   G     VV  GRR+G    F+ + 
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPG-----VVANGRRDG----FNSV- 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            ++R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLMVSDSMRYAILM
Sbjct: 61  -IMRFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMRYAILM 100

[Close]
BLAST of ClCG02G002570 vs. TAIR10
Match: AT2G04795.1 (AT2G04795.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 5.7e-21
Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADES-MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMI 60
           M ++ + +RRNL N+RKSPRVADES +    V G  GGG  +   +GG            
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGGNGS---NGG------------ 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
             +++ P SI+SCFS P V+  DG+WVSG++ R+SEVNHLMV D MRYA+LM
Sbjct: 61  --IMKFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLMVCDGMRYALLM 95

[Close]
BLAST of ClCG02G002570 vs. NCBI nr
Match: gi|449453582|ref|XP_004144535.1| (PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-46
Identity = 96/106 (90.57%), Postives = 97/106 (91.51%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWRLAAAVRRNLHNIRKSPRVADESMYG    GVDGGGRV AVVDG RREGNSYGFSMIY
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIY 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 107
           SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 103

[Close]
BLAST of ClCG02G002570 vs. NCBI nr
Match: gi|659110985|ref|XP_008455515.1| (PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-45
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVV-DGGRREGNSYGFSMI 60
           MWRLAAAVRRNLHNIRKSPRVADESMYG    GVDGGGRVAAVV DG RREGNSYGFSMI
Sbjct: 41  MWRLAAAVRRNLHNIRKSPRVADESMYG---GGVDGGGRVAAVVVDGDRREGNSYGFSMI 100

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 107
           YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 101 YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 144

[Close]
BLAST of ClCG02G002570 vs. NCBI nr
Match: gi|700188211|gb|KGN43444.1| (hypothetical protein Csa_7G037480 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-31
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 26  MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 85
           MYG    GVDGGGRV AVVDG RREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW
Sbjct: 1   MYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 60

Query: 86  VSGEFPRISEVNHLMVSDSMR 107
           VSGEFPRISEVNHLM S+  R
Sbjct: 61  VSGEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of ClCG02G002570 vs. NCBI nr
Match: gi|731409715|ref|XP_010657294.1| (PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera])

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-28
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGG---RREGNSYGFS 60
           MW + AA+RRN  NIRKSPRVADE+M+G       GG +    + G    RR     GFS
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFG-------GGNQAELPIFGRDMERRARGWDGFS 60

Query: 61  MIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            +YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  AVYSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of ClCG02G002570 vs. NCBI nr
Match: gi|1009128082|ref|XP_015881037.1| (PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba])

HSP 1 Score: 132.1 bits (331), Expect = 6.0e-28
Identity = 68/111 (61.26%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           M R+  ++R+N  NI KSPRVADESMYG GV G  GGG +  +    RR     GF ++Y
Sbjct: 2   MGRVLGSLRQNFQNIGKSPRVADESMYG-GVGG-GGGGNIEIME---RRRSGWKGFLIVY 61

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           S++R PFS+ SCFS PHVNG DG+W SGEF +ISE+NHLMVSDSMRYAILM
Sbjct: 62  SVVRAPFSLFSCFSHPHVNGADGVWASGEFAQISEMNHLMVSDSMRYAILM 107

The following BLAST results are available for this feature:
BLAST of ClCG02G002570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K391_CUCSA1.8e-3187.65Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1[more]
F6HII7_VITVI1.1e-2859.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=... [more]
A0A061DMU7_THECC7.1e-2859.46Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1[more]
A0A067KF26_JATCU5.1e-2657.02Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1[more]
I3SRB2_LOTJA1.1e-2560.36Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of ClCG02G002570 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G35732.16.5e-2553.15 unknown protein[more]
AT2G04795.15.7e-2148.21 unknown protein[more]
BLAST of ClCG02G002570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453582|ref|XP_004144535.1|3.7e-4690.57PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus][more]
gi|659110985|ref|XP_008455515.1|3.1e-4590.65PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo][more]
gi|700188211|gb|KGN43444.1|2.6e-3187.65hypothetical protein Csa_7G037480 [Cucumis sativus][more]
gi|731409715|ref|XP_010657294.1|1.6e-2859.65PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera][more]
gi|1009128082|ref|XP_015881037.1|6.0e-2861.26PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G002570.1ClCG02G002570.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G002570Cucurbita pepo (Zucchini)cpewcgB233
ClCG02G002570Cucurbita pepo (Zucchini)cpewcgB267
ClCG02G002570Cucurbita pepo (Zucchini)cpewcgB596
ClCG02G002570Bottle gourd (USVL1VR-Ls)lsiwcgB058
ClCG02G002570Bottle gourd (USVL1VR-Ls)lsiwcgB095
ClCG02G002570Bottle gourd (USVL1VR-Ls)lsiwcgB097
ClCG02G002570Cucumber (Gy14) v2cgybwcgB198
ClCG02G002570Cucumber (Gy14) v2cgybwcgB409
ClCG02G002570Cucumber (Gy14) v2cgybwcgB504
ClCG02G002570Cucumber (Gy14) v2cgybwcgB506
ClCG02G002570Melon (DHL92) v3.6.1medwcgB094
ClCG02G002570Melon (DHL92) v3.6.1medwcgB190
ClCG02G002570Silver-seed gourdcarwcgB0194
ClCG02G002570Silver-seed gourdcarwcgB0336
ClCG02G002570Silver-seed gourdcarwcgB1037
ClCG02G002570Cucumber (Chinese Long) v3cucwcgB219
ClCG02G002570Cucumber (Chinese Long) v3cucwcgB464
ClCG02G002570Cucumber (Chinese Long) v3cucwcgB570
ClCG02G002570Cucumber (Chinese Long) v3cucwcgB571
ClCG02G002570Watermelon (97103) v2wcgwmbB135
ClCG02G002570Watermelon (97103) v2wcgwmbB138
ClCG02G002570Watermelon (97103) v2wcgwmbB148
ClCG02G002570Watermelon (97103) v2wcgwmbB150
ClCG02G002570Wax gourdwcgwgoB266
ClCG02G002570Wax gourdwcgwgoB305
ClCG02G002570Watermelon (Charleston Gray)wcgwcgB047
ClCG02G002570Watermelon (Charleston Gray)wcgwcgB120
ClCG02G002570Cucumber (Gy14) v1cgywcgB185
ClCG02G002570Cucurbita maxima (Rimu)cmawcgB097
ClCG02G002570Cucurbita maxima (Rimu)cmawcgB460
ClCG02G002570Cucurbita maxima (Rimu)cmawcgB483
ClCG02G002570Cucurbita moschata (Rifu)cmowcgB094
ClCG02G002570Cucurbita moschata (Rifu)cmowcgB459
ClCG02G002570Wild cucumber (PI 183967)cpiwcgB218
ClCG02G002570Wild cucumber (PI 183967)cpiwcgB465
ClCG02G002570Wild cucumber (PI 183967)cpiwcgB574
ClCG02G002570Cucumber (Chinese Long) v2cuwcgB546
ClCG02G002570Melon (DHL92) v3.5.1mewcgB092
ClCG02G002570Melon (DHL92) v3.5.1mewcgB195
ClCG02G002570Watermelon (97103) v1wcgwmB198