ClCG02G002030 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G002030
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	formin homolog 6 LENGTH=899
Location	CG_Chr02 : 2110788 .. 2113877 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGCCGCACCTTCCCCTTCCCCTCCTCTGCCTACTCCCACTCCCCTGCAATTTCCGGTTAACCTCAATTCCACCCTCCCCGATCCCAACTATTCGCCTCCTCCTCCTCCTCCTCCCCCTCCGCCACCCCAAATTCCTCCACCCTCCTCCTCCCACCGCCCCTTCTTCGACGAAATGAACTTCTTCCCCGCCGATGATAAATCCCGCGTCCTTCTCTCTGCCTCTCACTCCAATCTCACTCCCACCAAACTCGACTTCAATGTTAACGTTCGTCGACATCATCCCTTTTCTTTTTCTTTAATTTATTTAATGGATTTTGAAGAATTGGGTTTTGATTGAATTTTGCAGACGGGATTGAATCTCTTGACCACGAATTCGTGTAGCGATCAATCCATGGTGGATGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAATAAAAAACGAGGTAGAAATGAAATTGAACACACTCTGTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTATTTTTAATTTGATTGATTGAATTTATAATGATGATGATGAATCAGAGAGCAGTTCTTCAAGCTGAATTGGAGAGGATAAACTCGGAGAATCTACGATTAAAAGACATGTTAAATCAAGTGACGAGCAATTACCAAACACTGCAGATGCAATTCAACACGCTAATTCAAACCCAGAAAACAGGGGACGCCGGTGACCCGATTGAGGAAAACGCCGGCAGTGGCGGAGGGAATAATAATAATAATAATAATAATAATCATAATAATATTGGTAATAAGCTGGTGCCCAGGCAATTTATGGATCTTGGATTAGCGACCAATATGGAGAACGATGAGCCGTCAATGTCGTCGTCGGAAGGGAGGAGTGGAGACCGGTCCCGGTCGCCAGGAACCACCGGAGAAGTAGCGTCGTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAACAACAGCAACAACAATAATAAAGTTCCAAAATTCAGTTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCCCCCATGGTAATTACCTCACTTTTAACTTTTTCCTTTCCATCATTTTTTCTTAAAAATTAATTTAAATATGAGTCCATTAATATAGTTATTGTTGAGTGATTAATGTATCTGTTGATTTCCAATCTCGATTTCCACTTTTTTGTTCTCGAGATCAACAAAGAAGGTAAGATAGTTATATGATTGGCCGGGAATGGAGTTAATTAGTAAGTTTAAGGGCTAAGATTGAAATGGTGGGGAAATTATATAATTGAAAGAAGTGAATTAATTAGAAAAAAAGAAATGAAAAATTGACACATTTGTTTTGATTTGAACTGTTTAGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTATTACCGGTGCACCATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTAAGTCACATCATAATTTATTTATTTATTTTTATAGAATTTATATTATGTTCCCTTGCATCAATATAATAAAAATGATATTATCAATGAAGGGAGGAGAGGAGATTCTCTGCATAAATTTGTGGGGATGGATTCTCTATTTAGATTTTTATTTTTAAATCTTTTTTAGAAAAATCCTTTTATACTTAAATAGTTAGTTGGATTAAGAAAAAGTTAGTTTTAATTAAACAATAAAATGTAGTTTTTTTTTAATATTATATAATTATAATTATGGTGATTAAACGAAATGAACTTAATTGTGCTATAATCTTGTATTATTAGTCTCAAGGTCAAATGTTTGATTCCTCTCACCCCACATATTGTCGCCATGAGTTTCCCATTCCTATTTAGAGAATAATCTTATATCAATGATATATTTTGGAGTCCATGGAAATAGTATATTATTATATCATCAATTTAGTTTAGAAGTTTACACTTTATTTTCTTTACCAAATAGTTGATTAACTTTTATTTTCTAAAATGTATTTTTTTTTGTTTTTCTTTTTTTTTTTTATGGGAGATGATGCACAGAGAGGCTGCACCCAAAGTTTACTCAAAAAAAGATATTTAAATTTTTTTTTCTCTTTTGTTATGAAAGGGATGTATAGACATGGTGCAGGATTACACCTAAGTATTACTTTATATTTGTTTGTGTGACAAATTTTATTAAGATTGCAACAAGTTTTTCTATTTAATATAATTTCCTAAAATCTTACTCATATTATAAGATTTAATTTTTGTTTGGTTTGAGGATGTGTATGAAATTGACCACAACTTTGGTTGTATATATAAATAAAATAGGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACAACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCCGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTCTCAGGATCCATGTCAAGTGCAGATGGTTTAATGAACTCTAATTTTTTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACGATCTCAGCCTCAGCCCCATTTCCCACAGTCACATTGGACCTAACTCAAAACCCTAATCCTTTATTCCAACGCCCGGCTGCGGGTCACTTTCCTATCCCGTTTGCGGCCGGTCCGCCCCAAAGCTTCCCACAGATCTTCGGACATGCATTATACAATCAATCAAAATTCTCAGGCCTTCAAATGTCAAAGGATATTGAAGCACCACCACCTCCACCACCGCAGAATCCATTGGCCGACACGTTGAGTGCTGCGGGTGTAGCAATTGCATCCGACCCGAATTTCATTGCGGCATTGGCAACGGCAATGACGTCGCTGATCGGCGGATCGCATCATCAGAATGAGAATGGTAATGGCAGTAGTAATGTTGATAACAATACAAATAGCAACTCCCAACAGTAACAACAAGAACAACAACATTATGATTCAAAGGTTATATTTGCCATTTCAGACCCAAGAAAAGAACTCTTTTTTTCATTTTGTTTTTTTTAAATATATAT

mRNA sequence

ATGGACGCCGCCGCACCTTCCCCTTCCCCTCCTCTGCCTACTCCCACTCCCCTGCAATTTCCGGTTAACCTCAATTCCACCCTCCCCGATCCCAACTATTCGCCTCCTCCTCCTCCTCCTCCCCCTCCGCCACCCCAAATTCCTCCACCCTCCTCCTCCCACCGCCCCTTCTTCGACGAAATGAACTTCTTCCCCGCCGATGATAAATCCCGCGTCCTTCTCTCTGCCTCTCACTCCAATCTCACTCCCACCAAACTCGACTTCAATGTTAACACGGGATTGAATCTCTTGACCACGAATTCGTGTAGCGATCAATCCATGGTGGATGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAATAAAAAACGAGGTAGAAATGAAATTGAACACACTCTGTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTATTTTTAATTTGATTGATTGAATTTATAATGATGATGATGAATCAGAGAGCAGTTCTTCAAGCTGAATTGGAGAGGATAAACTCGGAGAATCTACGATTAAAAGACATGTTAAATCAAGTGACGAGCAATTACCAAACACTGCAGATGCAATTCAACACGCTAATTCAAACCCAGAAAACAGGGGACGCCGGTGACCCGATTGAGGAAAACGCCGGCAGTGGCGGAGGGAATAATAATAATAATAATAATAATAATCATAATAATATTGGTAATAAGCTGGTGCCCAGGCAATTTATGGATCTTGGATTAGCGACCAATATGGAGAACGATGAGCCGTCAATGTCGTCGTCGGAAGGGAGGAGTGGAGACCGGTCCCGGTCGCCAGGAACCACCGGAGAAGTAGCGTCGTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAACAACAGCAACAACAATAATAAAGTTCCAAAATTCAGTTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCCCCCATGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTATTACCGGTGCACCATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACAACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCCGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTCTCAGGATCCATGTCAAGTGCAGATGGTTTAATGAACTCTAATTTTTTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACGATCTCAGCCTCAGCCCCATTTCCCACAGTCACATTGGACCTAACTCAAAACCCTAATCCTTTATTCCAACGCCCGGCTGCGGGTCACTTTCCTATCCCGTTTGCGGCCGGTCCGCCCCAAAGCTTCCCACAGATCTTCGGACATGCATTATACAATCAATCAAAATTCTCAGGCCTTCAAATGTCAAAGGATATTGAAGCACCACCACCTCCACCACCGCAGAATCCATTGGCCGACACGTTGAGTGCTGCGGGTGTAGCAATTGCATCCGACCCGAATTTCATTGCGGCATTGGCAACGGCAATGACGTCGCTGATCGGCGGATCGCATCATCAGAATGAGAATGGTAATGGCAGTAGTAATGTTGATAACAATACAAATAGCAACTCCCAACAGTAACAACAAGAACAACAACATTATGATTCAAAGGTTATATTTGCCATTTCAGACCCAAGAAAAGAACTCTTTTTTTCATTTTGTTTTTTTTAAATATATAT

Coding sequence (CDS)

ATGGACGCCGCCGCACCTTCCCCTTCCCCTCCTCTGCCTACTCCCACTCCCCTGCAATTTCCGGTTAACCTCAATTCCACCCTCCCCGATCCCAACTATTCGCCTCCTCCTCCTCCTCCTCCCCCTCCGCCACCCCAAATTCCTCCACCCTCCTCCTCCCACCGCCCCTTCTTCGACGAAATGAACTTCTTCCCCGCCGATGATAAATCCCGCGTCCTTCTCTCTGCCTCTCACTCCAATCTCACTCCCACCAAACTCGACTTCAATGTTAACACGGGATTGAATCTCTTGACCACGAATTCGTGTAGCGATCAATCCATGGTGGATGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAATAAAAAACGAGGTAGAAATGAAATTGAACACACTCTGTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTATTTTTAATTTGA

Protein sequence

MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCSDQSMVDDGVSPNPEEKRIKNEVEMKLNTLCFFSFLFLFLFLSFFLFLFLI

Homology

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BLAST of ClCG02G002030 vs. Swiss-Prot
Match: SSGP_VOLCA (Sulfated surface glycoprotein 185 OS=Volvox carteri PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 27/48 (56.25%), Postives = 27/48 (56.25%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
           PSP PP P+P P   P       P P+  PPPPPPPPPPP  PPPS S
Sbjct: 251 PSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPS 298

HSP 2 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 27/51 (52.94%), Postives = 26/51 (50.98%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           PSPSPP P P P   P       P P   PPPPPPPPPPP  P PS   +P
Sbjct: 256 PSPSPPPPPPPP---PPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKP 303

HSP 3 Score: 55.8 bits (133), Expect = 4.7e-07
Identity = 28/55 (50.91%), Postives = 28/55 (50.91%), Query Frame = 1


Query: 7   SPSPPLPTPT-----PLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           SP PP P PT     P   P     + P P+ SPPPPPPPPPPP  PPP S   P
Sbjct: 227 SPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPP 281

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BLAST of ClCG02G002030 vs. Swiss-Prot
Match: LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 28/56 (50.00%), Postives = 29/56 (51.79%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPN-YSPPPPPPPPPPPQI----PPPSSSHRP 57
           P P PP P P P+  P   +   P P  YSPPPPPPPPPPP +    PPP  S  P
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPP 522

HSP 2 Score: 55.5 bits (132), Expect = 6.1e-07
Identity = 26/47 (55.32%), Postives = 27/47 (57.45%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQI--PPP 51
           PSP PP+ +P P   P       P P YSPPPPPPPPPPP +  PPP
Sbjct: 429 PSPPPPVYSPPPPPPP-------PPPVYSPPPPPPPPPPPPVYSPPP 468

HSP 3 Score: 53.5 bits (127), Expect = 2.3e-06
Identity = 28/54 (51.85%), Postives = 27/54 (50.00%), Query Frame = 1


Query: 7   SPSPPLPTPTPLQFPVNLNSTLPDPN-YSPPPPPPPPPPP---QIPPPSSSHRP 57
           SP PP P P P+  P       P P  YSPPPPPPPPPPP     PPP S   P
Sbjct: 437 SPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPP 490

HSP 4 Score: 51.6 bits (122), Expect = 8.8e-06
Identity = 25/50 (50.00%), Postives = 26/50 (52.00%), Query Frame = 1


Query: 5   APSPSPPLPTPTPLQFPVNLNSTLPDPN--YSPPPPPPPPPPPQI--PPP 51
           +P P PP P P P+  P       P P   YSPPPP PPPPPP +  PPP
Sbjct: 450 SPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPP 499

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BLAST of ClCG02G002030 vs. Swiss-Prot
Match: ZFHX4_HUMAN (Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07
Identity = 44/136 (32.35%), Postives = 57/136 (41.91%), Query Frame = 1


Query: 6    PSPSPPLPTPTPLQ----FPVNLNSTL--------PDPNYSPPPPPPPPPPPQIPPPSSS 65
            P P PPLP P P Q     PV + +T+        P P   PPPPPPPPPPP  PPPS+ 
Sbjct: 1961 PPPPPPLP-PAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAP 2020

Query: 66   HR---PFFDEMNFFPADDKSRVLLSASHSNLTP-TKLDFNVNTGLNLLTTNSCSDQSMVD 125
             +   P   ++  FP    S ++    H  L P   L       L+   T  C  Q  +D
Sbjct: 2021 PQVQLPVSLDLPLFP----SIMMQPVQHPALPPQLALQLPQMDALSADLTQLCQQQLGLD 2080

HSP 2 Score: 40.4 bits (93), Expect = 2.0e-02
Identity = 20/41 (48.78%), Postives = 21/41 (51.22%), Query Frame = 1


Query: 13   PTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
            PT       ++L+S    P    PPPPPPPPP   PPPSSS
Sbjct: 3090 PTSATSSPALSLSSAPTKPLLQTPPPPPPPPP---PPPSSS 3127

HSP 3 Score: 39.7 bits (91), Expect = 3.5e-02
Identity = 16/28 (57.14%), Postives = 15/28 (53.57%), Query Frame = 1


Query: 29   PDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            P    +PPPPPPPPP P  PP  SS  P
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSSMGP 1979

[Close]

BLAST of ClCG02G002030 vs. Swiss-Prot
Match: ZFHX4_CHICK (Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-07
Identity = 25/49 (51.02%), Postives = 26/49 (53.06%), Query Frame = 1


Query: 6    PSPSPPLPTPTPLQFPV----NLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
            P P PP P PTP Q        + +T P P  +PPP PPPPPPP  PPP
Sbjct: 1950 PPPPPPPPPPTPSQPSSAGAGKIQNTTPTPLQAPPPTPPPPPPPPPPPP 1998

HSP 2 Score: 55.1 bits (131), Expect = 8.0e-07
Identity = 28/59 (47.46%), Postives = 28/59 (47.46%), Query Frame = 1


Query: 6    PSPSPPLPTPTPLQ------------FPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSS 53
            P P PP P PTP Q             P  L +  P P   PPPPPPPPPPP  PPPS+
Sbjct: 1950 PPPPPPPPPPTPSQPSSAGAGKIQNTTPTPLQA--PPPTPPPPPPPPPPPPPPPPPPSA 2006

HSP 3 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 33/78 (42.31%), Postives = 32/78 (41.03%), Query Frame = 1


Query: 6    PSPSPPLP--------------TPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPP-- 65
            P P PP P              TPTPLQ P     T P P   PPPPPPPPPPP  PP  
Sbjct: 1954 PPPPPPTPSQPSSAGAGKIQNTTPTPLQAPP---PTPPPPPPPPPPPPPPPPPPSAPPQV 2013

HSP 4 Score: 48.1 bits (113), Expect = 9.8e-05
Identity = 19/25 (76.00%), Postives = 17/25 (68.00%), Query Frame = 1


Query: 29   PDPNYSPPPPPPPPPPPQIPPPSSS 54
            P P   PPPPPPPPPPP  PPPSSS
Sbjct: 3107 PPPPPPPPPPPPPPPPPPPPPPSSS 3131

HSP 5 Score: 45.8 bits (107), Expect = 4.8e-04
Identity = 21/30 (70.00%), Postives = 19/30 (63.33%), Query Frame = 1


Query: 24   LNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
            L  T P P   PPPPPPPPPPP  PPPSSS
Sbjct: 3103 LLQTPPPPPPPPPPPPPPPPPPP-PPPSSS 3131

HSP 6 Score: 45.4 bits (106), Expect = 6.3e-04
Identity = 24/45 (53.33%), Postives = 25/45 (55.56%), Query Frame = 1


Query: 9    SPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
            SP L   +    P+ L +  P P   PPPPPPPPPPP  PPPSSS
Sbjct: 3090 SPALSLSSAPSKPL-LQTPPPPPPPPPPPPPPPPPPP--PPPSSS 3131

HSP 7 Score: 44.7 bits (104), Expect = 1.1e-03
Identity = 26/51 (50.98%), Postives = 26/51 (50.98%), Query Frame = 1


Query: 3    AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
            ++APS  P L TP P           P P   PPPPPPPPPP   PPPSSS
Sbjct: 3096 SSAPS-KPLLQTPPP-----------PPPPPPPPPPPPPPPP---PPPSSS 3131

HSP 8 Score: 44.3 bits (103), Expect = 1.4e-03
Identity = 16/28 (57.14%), Postives = 17/28 (60.71%), Query Frame = 1


Query: 29   PDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            P    +PPPPPPPPPPP  PPP +  +P
Sbjct: 1937 PSSPETPPPPPPPPPPPPPPPPPTPSQP 1964

HSP 9 Score: 42.4 bits (98), Expect = 5.4e-03
Identity = 17/34 (50.00%), Postives = 19/34 (55.88%), Query Frame = 1


Query: 20   FPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
            +P++ +S    P   PPPPPPPPPPP  P   SS
Sbjct: 1933 YPISPSSPETPPPPPPPPPPPPPPPPPTPSQPSS 1966

HSP 10 Score: 42.4 bits (98), Expect = 5.4e-03
Identity = 18/38 (47.37%), Postives = 19/38 (50.00%), Query Frame = 1


Query: 13   PTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
            PT       ++L+S    P    PPPPPPPPPP  PPP
Sbjct: 3084 PTSATSSPALSLSSAPSKPLLQTPPPPPPPPPPPPPPP 3121

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BLAST of ClCG02G002030 vs. Swiss-Prot
Match: YPRO_OWEFU (Uncharacterized proline-rich protein (Fragment) OS=Owenia fusiformis PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 25/50 (50.00%), Postives = 23/50 (46.00%), Query Frame = 1


Query: 6  PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHR 56
          P P PP P P P   P       P P   PPPPPPPPPPP  PPP    R
Sbjct: 11 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRR 60

HSP 2 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 24/50 (48.00%), Postives = 24/50 (48.00%), Query Frame = 1


Query: 1  MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
          + +  P P PP P P P   P       P P   PPPPPPPPPPP  PPP
Sbjct: 4  LHSLTPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 53

HSP 3 Score: 43.5 bits (101), Expect = 2.4e-03
Identity = 17/29 (58.62%), Postives = 17/29 (58.62%), Query Frame = 1


Query: 22 VNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
          + L  +L  P   PPPPPPPPPPP  PPP
Sbjct: 1  IRLLHSLTPPPPPPPPPPPPPPPPPPPPP 29

[Close]

BLAST of ClCG02G002030 vs. TrEMBL
Match: A0A0V0S3U7_9BILA (Mediator of RNA polymerase II transcription subunit 26 (Fragment) OS=Trichinella nelsoni GN=med26 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-08
Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 1


Query: 4   AAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNF 63
           +AP+P PP P P P Q      S+ P    SPPPP P PPPP  PPP  S  P     + 
Sbjct: 260 SAPTPPPPPPPPPPPQ------SSPPPLPPSPPPPTPTPPPPPPPPPPPSTSPSLTTTSS 319

Query: 64  FPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCSDQSMVDDG-VSPNP 117
            P   K+   L A  +   P +L  N+NT + + +TN+    +  + G  +P+P
Sbjct: 320 RPPKLKTTAQLVADLTKCYPEELLVNINTSIGVDSTNALQQATASNSGDDAPSP 367

[Close]

BLAST of ClCG02G002030 vs. TrEMBL
Match: A0A0V0S3U7_9BILA (Mediator of RNA polymerase II transcription subunit 26 (Fragment) OS=Trichinella nelsoni GN=med26 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-05
Identity = 40/134 (29.85%), Postives = 56/134 (41.79%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNY-SPPPPPPPPPPPQI----------------- 65
           P P P  P   P + P      LP P+  +PPPPPPPPPPPQ                  
Sbjct: 235 PVPLPSAPASQP-RHPPPPQPPLPPPSAPTPPPPPPPPPPPQSSPPPLPPSPPPPTPTPP 294

Query: 66  ----PPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCS 117
               PPP  S  P     +  P   K+   L A  +   P +L  N+NT + + +TN+  
Sbjct: 295 PPPPPPPPPSTSPSLTTTSSRPPKLKTTAQLVADLTKCYPEELLVNINTSIGVDSTNALQ 354

HSP 2 Score: 62.8 bits (151), Expect = 4.3e-07
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPP 50
           + AP P PP P P P   PV+  S  P P+ +PPPPPPPPPPP  PP
Sbjct: 610 SGAPPPPPPPPPPPPPPAPVSAESAPPAPSGAPPPPPPPPPPPPQPP 656

[Close]

BLAST of ClCG02G002030 vs. TrEMBL
Match: A0A0D2X0C1_CAPO3 (Uncharacterized protein OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_000382 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-06
Identity = 26/51 (50.98%), Postives = 30/51 (58.82%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
           A  P P PP P P P   PV+  S    P+ +PPPPPPPPPPP  P P S+
Sbjct: 581 AGPPPPPPPPPPPPPPPAPVSAESAPLAPSGAPPPPPPPPPPPPPPAPVSA 631

HSP 2 Score: 48.5 bits (114), Expect = 8.3e-03
Identity = 26/62 (41.94%), Postives = 31/62 (50.00%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYS----PPPPPPPPPPPQI----PPPSSSH 57
           A  P P PP P P P   PV+  S    P+ +    PPPPPPPPPP  +     PP+ S 
Sbjct: 581 AGPPPPPPPPPPPPPPPAPVSAESAPLAPSGAPPPPPPPPPPPPPPAPVSAESAPPAPSG 640

HSP 3 Score: 44.3 bits (103), Expect = 1.6e-01
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 1


Query: 29  PDPNYSPPPPPPPPPPPQIPPP 51
           P P+  PPPPPPPPPPP  PPP
Sbjct: 439 PAPSGPPPPPPPPPPPPPPPPP 460

HSP 4 Score: 42.4 bits (98), Expect = 6.0e-01
Identity = 20/46 (43.48%), Postives = 22/46 (47.83%), Query Frame = 1


Query: 4   AAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPP 50
           A P+PS P P P                   PPPPPPPPPPP +PP
Sbjct: 437 APPAPSGPPPPP-------------------PPPPPPPPPPPPMPP 463

HSP 5 Score: 40.4 bits (93), Expect = 2.3e+00
Identity = 26/77 (33.77%), Postives = 30/77 (38.96%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNL------NSTLPDPNY--------------SPPPPPPPP 57
           A  P P PP P P P   PV +         +P P                +PPPPPP P
Sbjct: 641 APPPPPPPPPPPPQPPSAPVAVLPVVAPTGAVPAPPAFIPPPPPAPPASVGAPPPPPPGP 700

HSP 6 Score: 38.9 bits (89), Expect = 6.6e+00
Identity = 16/48 (33.33%), Postives = 22/48 (45.83%), Query Frame = 1


Query: 9   SPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           +PP+           + + +      PPPPPPPPPPP   P S+   P
Sbjct: 559 APPITAAAAAATTAAVTAGVAQAGPPPPPPPPPPPPPPPAPVSAESAP 606

HSP 7 Score: 62.0 bits (149), Expect = 7.3e-07
Identity = 26/52 (50.00%), Postives = 29/52 (55.77%), Query Frame = 1


Query: 5    APSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            AP+P+PP P P     P  L+   P P   PPPPPPPPPPP  PPP     P
Sbjct: 1027 APAPAPPPPPPPAPPMPPTLDGVAPPPAPPPPPPPPPPPPPPPPPPPPGPPP 1078

[Close]

BLAST of ClCG02G002030 vs. TrEMBL
Match: A0A0E9NG61_9ASCO (Uncharacterized protein OS=Saitoella complicata NRRL Y-17804 GN=G7K_2851-t1 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 30/79 (37.97%), Postives = 36/79 (45.57%), Query Frame = 1


Query: 1    MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDP----NYSPPPPPPPPP------PPQIPPP 60
            +D  AP P+PP P P P   P       P P       PPPPPPPPP      PP  PPP
Sbjct: 1046 LDGVAPPPAPPPPPPPPPPPPPPPPPPPPGPPPILGGPPPPPPPPPPPGMIGGPPPPPPP 1105

Query: 61   SSSHRPFFDEMNFFPADDK 70
                R     ++F P +D+
Sbjct: 1106 MPGMRTPVQMLSFTPVEDE 1124

HSP 2 Score: 61.2 bits (147), Expect = 1.2e-06
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 1


Query: 6    PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
            P P PP P P P+  P ++ ++ P P   PPPPPPPPPPP  PPP
Sbjct: 1158 PPPPPPPPPPPPVVVPTDVPTSPPPPPPPPPPPPPPPPPPPPPPP 1202

[Close]

BLAST of ClCG02G002030 vs. TrEMBL
Match: D3P6N3_AZOS1 (Uncharacterized protein OS=Azospirillum sp. (strain B510) GN=AZL_d04860 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.8e-05
Identity = 31/96 (32.29%), Postives = 39/96 (40.62%), Query Frame = 1


Query: 6    PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNFFP 65
            P P PP P P P+  P ++      P   PPPPPPPPPPP  PPP     P        P
Sbjct: 1158 PPPPPPPPPPPPVVVPTDV------PTSPPPPPPPPPPPPPPPPPPPPPPPPPPPPVVVP 1217

Query: 66   ADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNS 102
            + D   +  + S +    T        G N   T +
Sbjct: 1218 STDVPTIPPATSSTTSATTGAGSGAGDGTNTTGTTA 1247

HSP 2 Score: 49.7 bits (117), Expect = 3.7e-03
Identity = 23/51 (45.10%), Postives = 27/51 (52.94%), Query Frame = 1


Query: 1    MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPS 52
            + +  PSP PP P P P   P       P P   PPPPPPPPPPP +  P+
Sbjct: 1129 VSSTPPSPPPPPPPPPPPPPPPP-----PPPPPPPPPPPPPPPPPPVVVPT 1174

HSP 3 Score: 61.2 bits (147), Expect = 1.2e-06
Identity = 36/93 (38.71%), Postives = 46/93 (49.46%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPS---SSHRPFFDEMN 65
           P P PP P P P   P       P P+  PPPPPPPPPPP  PPP    +   P+ D ++
Sbjct: 287 PPPPPPSPPPPPPPPPPPPPPPPPPPHPPPPPPPPPPPPPPPPPPPVPLAPSSPYCDCLS 346

Query: 66  FFPADDKSRVLLSASHSNLTPTKLDFNVNTGLN 96
               +  SR  +S   SN+T  +L +N    LN
Sbjct: 347 PL-VNTNSRWAVSYVASNITNGELLYNFKISLN 378

[Close]

BLAST of ClCG02G002030 vs. TAIR10
Match: AT4G13340.1 (AT4G13340.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 28/56 (50.00%), Postives = 29/56 (51.79%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPN-YSPPPPPPPPPPPQI----PPPSSSHRP 57
           P P PP P P P+  P   +   P P  YSPPPPPPPPPPP +    PPP  S  P
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPP 522

HSP 2 Score: 55.5 bits (132), Expect = 3.4e-08
Identity = 26/47 (55.32%), Postives = 27/47 (57.45%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQI--PPP 51
           PSP PP+ +P P   P       P P YSPPPPPPPPPPP +  PPP
Sbjct: 429 PSPPPPVYSPPPPPPP-------PPPVYSPPPPPPPPPPPPVYSPPP 468

HSP 3 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 28/54 (51.85%), Postives = 27/54 (50.00%), Query Frame = 1


Query: 7   SPSPPLPTPTPLQFPVNLNSTLPDPN-YSPPPPPPPPPPP---QIPPPSSSHRP 57
           SP PP P P P+  P       P P  YSPPPPPPPPPPP     PPP S   P
Sbjct: 437 SPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPP 490

HSP 4 Score: 51.6 bits (122), Expect = 5.0e-07
Identity = 25/50 (50.00%), Postives = 26/50 (52.00%), Query Frame = 1


Query: 5   APSPSPPLPTPTPLQFPVNLNSTLPDPN--YSPPPPPPPPPPPQI--PPP 51
           +P P PP P P P+  P       P P   YSPPPP PPPPPP +  PPP
Sbjct: 450 SPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPP 499

[Close]

BLAST of ClCG02G002030 vs. TAIR10
Match: AT4G18670.1 (AT4G18670.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 30/63 (47.62%), Postives = 34/63 (53.97%), Query Frame = 1


Query: 6   PSPSPPLP-TPTPLQFPVNLNSTLPDP----NYSPPPPPPPPPP-----PQI-PPPSSSH 58
           P+PS P P TPTP+  P   ++  P P     YSPP PPPPPPP     P I PPP  ++
Sbjct: 611 PTPSSPPPSTPTPVYSPPPPSTGYPPPPPFTGYSPPSPPPPPPPTFSPSPSIPPPPPQTY 670

HSP 2 Score: 45.1 bits (105), Expect = 4.7e-05
Identity = 23/46 (50.00%), Postives = 21/46 (45.65%), Query Frame = 1


Query: 8   PSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSS 54
           PSPP P P P   P       P   YSP PPPPPPPP    PP  S
Sbjct: 646 PSPP-PPPPPTFSPSPSIPPPPPQTYSPFPPPPPPPPQTYYPPQPS 690

HSP 3 Score: 39.3 bits (90), Expect = 2.6e-03
Identity = 25/60 (41.67%), Postives = 25/60 (41.67%), Query Frame = 1


Query: 6   PSPSP------PLPTPTPLQFPVNLNSTLPDPNYSPP--------PPPPPPPPPQIPPPS 52
           P P+P      P P PTP+  P    S  P   YSPP        PPPPP P    PPPS
Sbjct: 742 PPPTPTYHYISPPPPPTPIHSPPP-QSHPPCIEYSPPPPPTVHYNPPPPPSPAHYSPPPS 800

[Close]

BLAST of ClCG02G002030 vs. TAIR10
Match: AT1G70460.1 (AT1G70460.1 root hair specific 10)

HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07
Identity = 28/71 (39.44%), Postives = 32/71 (45.07%), Query Frame = 1


Query: 2   DAAAPSPSPP---LPTPTPLQFPVNLNSTLPDPNYSPPP----------------PPPPP 54
           D   P  SPP    P P P+ FP  ++S  P+   SPPP                PP PP
Sbjct: 82  DLTPPPSSPPPPDAPPPIPIVFPPPIDSPPPESTNSPPPPEVFEPPPPPADEDESPPAPP 141

HSP 2 Score: 45.4 bits (106), Expect = 3.6e-05
Identity = 25/56 (44.64%), Postives = 28/56 (50.00%), Query Frame = 1


Query: 4  AAPSPSPPLPTPTPLQF--PVNLNSTLPDP-NYSPPPPPPPPPPPQIPPPSSSHRP 57
          A  SP P LP+  P  F  P  ++S  P P + SPPPPP   PPP  PPP  +  P
Sbjct: 43 ADSSPPPALPSLPPAVFSPPPTVSSPPPPPLDSSPPPPPDLTPPPSSPPPPDAPPP 98

[Close]

BLAST of ClCG02G002030 vs. TAIR10
Match: AT5G07740.1 (AT5G07740.1 actin binding)

HSP 1 Score: 52.0 bits (123), Expect = 3.8e-07
Identity = 31/63 (49.21%), Postives = 35/63 (55.56%), Query Frame = 1


Query: 3    AAAPSP----SPPLPTPTPLQFPVNLNSTL--PDPNY-SPPPPPPPPP----PPQIPPPS 55
            ++APSP    +PP P P P     N +S L  P P+Y SPPPPPPPPP    PP  PPP 
Sbjct: 941  SSAPSPPVKTAPPPPPPPPFS---NAHSVLSPPPPSYGSPPPPPPPPPSYGSPPPPPPPP 1000

HSP 2 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 26/51 (50.98%), Postives = 25/51 (49.02%), Query Frame = 1


Query: 9    SPPLPTPTPLQFPVNLNSTLPDPNY-SPPPPPPPPP----PPQIPPPSSSH 55
            SPP P P P  +        P P Y SPPPPPPPPP    PP  PPP  SH
Sbjct: 989  SPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSYGSPPPPPPPPFSH 1039

HSP 3 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 25/51 (49.02%), Postives = 26/51 (50.98%), Query Frame = 1


Query: 9    SPPLPTPTPLQFPVNLNSTLPDPNY-SPPPPPPPPP----PPQIPPPSSSH 55
            SPP P P P  +        P P+Y SPPPPPPPPP    PP  PPP  S+
Sbjct: 976  SPPPPPPPPPSYGSPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSY 1026

HSP 4 Score: 45.4 bits (106), Expect = 3.6e-05
Identity = 30/72 (41.67%), Postives = 33/72 (45.83%), Query Frame = 1


Query: 3    AAAPSP----SPPLPTPTPLQFPVNLNSTL--PDPNY--------------SPPPPPPPP 51
            ++APSP    +PP P P P     N +S L  P P+Y              SPPPPPPPP
Sbjct: 941  SSAPSPPVKTAPPPPPPPPFS---NAHSVLSPPPPSYGSPPPPPPPPPSYGSPPPPPPPP 1000

HSP 5 Score: 41.6 bits (96), Expect = 5.1e-04
Identity = 28/77 (36.36%), Postives = 31/77 (40.26%), Query Frame = 1


Query: 4   AAPSPSPP-LPTPTPLQFPVNLNSTLPDPNY---------SPPPPPPP------------ 57
           ++P  +P  LP  +P Q P  L S   +            SPPPPPPP            
Sbjct: 640 SSPKETPSSLPPASPHQAPPPLPSLTSEAKTVLHSSQAVASPPPPPPPPPLPTYSHYQTS 699

HSP 6 Score: 39.7 bits (91), Expect = 2.0e-03
Identity = 20/38 (52.63%), Postives = 18/38 (47.37%), Query Frame = 1


Query: 8   PSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPP 46
           PSPP P P P    V  NS         PPPPPPPPPP
Sbjct: 821 PSPPPPPPPPPFASVRRNSET-----LLPPPPPPPPPP 853

HSP 7 Score: 34.7 bits (78), Expect = 6.3e-02
Identity = 28/92 (30.43%), Postives = 31/92 (33.70%), Query Frame = 1


Query: 2   DAAAPSPSPPLPTPTPLQFPVNLNST----LPDP---------------------NYSPP 57
           +A + S SPP P P P   P+N        LP P                     + +P 
Sbjct: 886 EACSTSSSPPPPPPPPPFSPLNTTKANDYILPPPPLPYTSIAPSPSVKILPLHGISSAPS 945

HSP 8 Score: 32.3 bits (72), Expect = 3.1e-01
Identity = 15/37 (40.54%), Postives = 16/37 (43.24%), Query Frame = 1


Query: 8   PSPPLPTPTPLQFPVNLNS-TLPDPNYSPPPPPPPPP 44
           P PP P P    +     +      + SPPPPPPPPP
Sbjct: 866 PPPPPPPPWKSLYASTFETHEACSTSSSPPPPPPPPP 902

[Close]

BLAST of ClCG02G002030 vs. TAIR10
Match: AT3G22800.1 (AT3G22800.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.8e-07
Identity = 26/56 (46.43%), Postives = 26/56 (46.43%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQI----PPPSSSHRPF 58
           PSP PP P P P           P P   PPPPPPPPPPP +    PPP  S  P+
Sbjct: 377 PSPPPPPPPPPPPP---------PPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPY 423

HSP 2 Score: 45.8 bits (107), Expect = 2.7e-05
Identity = 23/57 (40.35%), Postives = 24/57 (42.11%), Query Frame = 1


Query: 1   MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPF 58
           +D A+   SPP P P P                 PPPPPPPPPPP  PPP     P+
Sbjct: 367 IDCASFGCSPPSPPPPPPP---------------PPPPPPPPPPPPPPPPPPPPPPY 408

[Close]

BLAST of ClCG02G002030 vs. NCBI nr
Match: gi|954479169|gb|KRZ09095.1| (Mediator of RNA polymerase II transcription subunit 26, partial [Trichinella zimbabwensis])

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-08
Identity = 39/114 (34.21%), Postives = 53/114 (46.49%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMN 62
           A  P P PP P P P   P    S+ P P  SPPPPPPPPPPP  P  S S        +
Sbjct: 314 APTPPPPPPPPPPPPSSPPPLPPSSPPPPPSSPPPPPPPPPPPPPPSTSPSLITTTTPSS 373

Query: 63  FFPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCSDQSMVDDGVSPNP 117
             P   K+   L A  +   P +L  N++T + + +TN+    +      +P+P
Sbjct: 374 SRPPKLKTTAELVADLTKCYPEELLVNISTSIGVDSTNALQQATSNSGDDAPSP 427

[Close]

BLAST of ClCG02G002030 vs. NCBI nr
Match: gi|954479169|gb|KRZ09095.1| (Mediator of RNA polymerase II transcription subunit 26, partial [Trichinella zimbabwensis])

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-04
Identity = 25/54 (46.30%), Postives = 30/54 (55.56%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           A+   PS P+P   P   P    + LP    SPPPPP PP PP +PPPSS+  P
Sbjct: 268 ASCSRPSQPVPFTRPRPRP----APLPSAKTSPPPPPTPPQPPPLPPPSSAPTP 317

HSP 2 Score: 48.5 bits (114), Expect = 1.2e-02
Identity = 27/53 (50.94%), Postives = 29/53 (54.72%), Query Frame = 1


Query: 5   APSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPP-PSSSHRP 57
           +P P P  P P PL  P    S+ P P   PPPPPPPPPP   PP P SS  P
Sbjct: 295 SPPPPPTPPQPPPLPPP----SSAPTP--PPPPPPPPPPPSSPPPLPPSSPPP 341

HSP 3 Score: 48.1 bits (113), Expect = 1.6e-02
Identity = 27/51 (52.94%), Postives = 29/51 (56.86%), Query Frame = 1


Query: 5   APSPSP---PLPTPTPLQFPVNLNSTLPDPNY--SPPPPPPPPPPPQIPPP 51
           AP PS    P P PTP Q P      LP P+   +PPPPPPPPPPP   PP
Sbjct: 287 APLPSAKTSPPPPPTPPQPP-----PLPPPSSAPTPPPPPPPPPPPPSSPP 332

HSP 4 Score: 63.9 bits (154), Expect = 2.7e-07
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 1


Query: 2   DAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           +AA P P PP P P P   P       P+P ++PPPPPPPPPPP  PPP     P
Sbjct: 386 EAAPPPPPPPPPPPPPPPPPPAAPEPEPEPEFAPPPPPPPPPPPPPPPPPPPPAP 440

[Close]

BLAST of ClCG02G002030 vs. NCBI nr
Match: gi|749885730|gb|KIJ55098.1| (hypothetical protein M422DRAFT_73197 [Sphaerobolus stellatus SS14])

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-03
Identity = 25/64 (39.06%), Postives = 29/64 (45.31%), Query Frame = 1


Query: 2   DAAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYS---------PPPPPPPPPPPQIPPPSS 57
           +AA P P PP P P P   P       P+P ++         PPPPPPPPPPP    P  
Sbjct: 386 EAAPPPPPPPPPPPPPPPPPPAAPEPEPEPEFAPPPPPPPPPPPPPPPPPPPPAPAAPEP 445

HSP 2 Score: 42.4 bits (98), Expect = 8.5e-01
Identity = 17/34 (50.00%), Postives = 19/34 (55.88%), Query Frame = 1


Query: 17  PLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
           P + P    +  P P   PPPPPPPPPPP  P P
Sbjct: 378 PEEAPPASEAAPPPPPPPPPPPPPPPPPPAAPEP 411

HSP 3 Score: 40.0 bits (92), Expect = 4.2e+00
Identity = 15/28 (53.57%), Postives = 17/28 (60.71%), Query Frame = 1


Query: 29  PDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
           P  + + PPPPPPPPPP  PPP     P
Sbjct: 382 PPASEAAPPPPPPPPPPPPPPPPPPAAP 409

HSP 4 Score: 38.1 bits (87), Expect = 1.6e+01
Identity = 18/42 (42.86%), Postives = 20/42 (47.62%), Query Frame = 1


Query: 17  PLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFF 59
           P + P    +  P P   PPPPPPPPPPP    P     P F
Sbjct: 378 PEEAPPASEAAPPPP--PPPPPPPPPPPPPPAAPEPEPEPEF 417

HSP 5 Score: 33.5 bits (75), Expect = 4.0e+02
Identity = 14/33 (42.42%), Postives = 15/33 (45.45%), Query Frame = 1


Query: 28  LPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDE 61
           +P P  SPPP P PPP P  P          DE
Sbjct: 541 IPPPPPSPPPAPSPPPAPPAPAAGPEQHEAADE 573

HSP 6 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 1


Query: 5    APSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            +P PSPPLP+P P   P +L    P P+ SPPP P PPPPP  PPP S   P
Sbjct: 1553 SPPPSPPLPSPPPSPPPPSLPPPSPPPSPSPPPSPSPPPPPSPPPPPSPPPP 1604

[Close]

BLAST of ClCG02G002030 vs. NCBI nr
Match: gi|612387327|ref|XP_007509184.1| (predicted protein [Bathycoccus prasinos])

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06
Identity = 30/58 (51.72%), Postives = 34/58 (58.62%), Query Frame = 1


Query: 5    APSPSPPLPTPTPLQFPVNLN------STLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            +P PSPPLP+P P   P +L       S  P P+ SPPPPP PPPPP  PPP S   P
Sbjct: 1553 SPPPSPPLPSPPPSPPPPSLPPPSPPPSPSPPPSPSPPPPPSPPPPPSPPPPPSPPPP 1610

HSP 2 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 28/52 (53.85%), Postives = 30/52 (57.69%), Query Frame = 1


Query: 6    PSPSPP-LPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRP 57
            PSP PP LP P+P   P    S  P P  SPPPPP PPPPP  PPP+    P
Sbjct: 1565 PSPPPPSLPPPSPPPSPSPPPSPSPPPPPSPPPPPSPPPPPSPPPPNPPPSP 1616

HSP 3 Score: 56.2 bits (134), Expect = 5.7e-05
Identity = 31/72 (43.06%), Postives = 35/72 (48.61%), Query Frame = 1


Query: 5    APSPSPPLPTPTPLQFPVNLNSTLPDPNYSPP----------------PPPPPPPPPQIP 60
            +P PSPPLP+P P   P +L    P P+ SPP                PPPPP PPP  P
Sbjct: 1553 SPPPSPPLPSPPPSPPPPSLPPPSPPPSPSPPPSPSPPPPPSPPPPPSPPPPPSPPPPNP 1612

HSP 4 Score: 41.6 bits (96), Expect = 1.5e+00
Identity = 25/73 (34.25%), Postives = 34/73 (46.58%), Query Frame = 1


Query: 32  NYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNLTPTKLDFNVN 91
           ++S PPPPPPP PP +PPPS    P     N  P      V +      +T  + DF + 
Sbjct: 149 SHSCPPPPPPPSPPPLPPPS----PPPPGSNGVPT-----VAIGVQALQVTDREFDFQIT 207

Query: 92  TGLNLLTTNSCSD 105
                ++ N CSD
Sbjct: 209 -----VSDNDCSD 207

HSP 5 Score: 40.0 bits (92), Expect = 4.2e+00
Identity = 28/83 (33.73%), Postives = 37/83 (44.58%), Query Frame = 1


Query: 22  VNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNL 81
           V+ NS      +S PPPPPPP PP +PPPS    P     N  P      V +      +
Sbjct: 145 VDCNS------HSCPPPPPPPSPPPLPPPS----PPPPGSNGVPT-----VAIGVQALQV 204

Query: 82  TPTKLDFNVNTGLNLLTTNSCSD 105
           T  + DF +      ++ N CSD
Sbjct: 205 TDREFDFQIT-----VSDNDCSD 207

HSP 6 Score: 36.2 bits (82), Expect = 6.1e+01
Identity = 21/58 (36.21%), Postives = 27/58 (46.55%), Query Frame = 1


Query: 12   LPTPTPLQFP-VNLNSTLPDPNYSPPPPPPPPPPPQIPPPSSSHRPFFDEMNFFPADD 69
            +P P P Q   V L        + PPPPPPP      PPPS  + P  D++ F   +D
Sbjct: 1319 IPGPFPTQVSEVKLYVKTTGEVFCPPPPPPP------PPPSPLYSPVTDDVFFSAIED 1370

HSP 7 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 28/45 (62.22%), Postives = 30/45 (66.67%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
           PSPSPP P+P P   P  + S  P P  SPPPPPPPPPPP  PPP
Sbjct: 587 PSPSPPPPSPPP---PTPVPSPAPSPAPSPPPPPPPPPPPPPPPP 628

[Close]

BLAST of ClCG02G002030 vs. NCBI nr
Match: gi|551609592|ref|XP_005785990.1| (hypothetical protein EMIHUDRAFT_111701 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06
Identity = 25/45 (55.56%), Postives = 26/45 (57.78%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
           PSP PP P P+P   P       P P   PPPPPPPPPPP  PPP
Sbjct: 594 PSPPPPTPVPSPAPSPAPSPPPPPPPPPPPPPPPPPPPPPLPPPP 638

HSP 2 Score: 52.8 bits (125), Expect = 6.3e-04
Identity = 27/54 (50.00%), Postives = 28/54 (51.85%), Query Frame = 1


Query: 3   AAAPSPSPPLPT------PTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPPP 51
           A  P PSPPLP       PTP   P    +  P P    PPPPPP PPPQ PPP
Sbjct: 527 ANPPPPSPPLPPLPAAPPPTPAPPPPFAPAAPPSPQPPYPPPPPPLPPPQPPPP 580

HSP 3 Score: 48.9 bits (115), Expect = 9.1e-03
Identity = 26/55 (47.27%), Postives = 27/55 (49.09%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSP-PPPPPPPPPPQIPPPSSSHRP 57
           AA PSP PP P P P   P       P P   P PPP P PPPP  PPP+    P
Sbjct: 556 AAPPSPQPPYPPPPPPLPPPQ-----PPPPLPPSPPPSPSPPPPSPPPPTPVPSP 605

HSP 4 Score: 46.6 bits (109), Expect = 4.5e-02
Identity = 25/54 (46.30%), Postives = 28/54 (51.85%), Query Frame = 1


Query: 6   PSPSPPLPTPTPLQFPVNLNST-----LPDPNYSP----PPPPPPPPPPQIPPP 51
           P P  PL  P PL  P +L S      LP P+  P    PPP PPP PP +PPP
Sbjct: 702 PGPPGPLAVPPPLLPPPSLPSPSLPSLLPPPSLPPLALPPPPLPPPSPPPLPPP 755

HSP 5 Score: 45.8 bits (107), Expect = 7.7e-02
Identity = 29/67 (43.28%), Postives = 31/67 (46.27%), Query Frame = 1


Query: 3   AAAPSPSPPLPT------PTPLQFPVNLNSTLPDPNYS----PPPPPPPPPPPQI---PP 57
           A  P PSPPLP       PTP   P    +  P P       PPP PPP PPP +   PP
Sbjct: 527 ANPPPPSPPLPPLPAAPPPTPAPPPPFAPAAPPSPQPPYPPPPPPLPPPQPPPPLPPSPP 586

HSP 6 Score: 43.1 bits (100), Expect = 5.0e-01
Identity = 25/58 (43.10%), Postives = 27/58 (46.55%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPP----PPPPPPPPQIPPPSSSHRP 57
           AAA S  PP P+P+PL          P P   PPP    P PPPPPP  P      RP
Sbjct: 392 AAALSNQPPSPSPSPLP---------PRPPPPPPPSLPHPEPPPPPPSAPCAEQDLRP 440

HSP 7 Score: 62.8 bits (151), Expect = 6.1e-07
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 1


Query: 3   AAAPSPSPPLPTPTPLQFPVNLNSTLPDPNYSPPPPPPPPPPPQIPP 50
           + AP P PP P P P   PV+  S  P P+ +PPPPPPPPPPP  PP
Sbjct: 610 SGAPPPPPPPPPPPPPPAPVSAESAPPAPSGAPPPPPPPPPPPPQPP 656

The following BLAST results are available for this feature:

BLAST of ClCG02G002030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SSGP_VOLCA	1.5e-08	56.25	Sulfated surface glycoprotein 185 OS=Volvox carteri PE=1 SV=1	[more]
LRX3_ARATH	2.7e-07	50.00	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1...	[more]
ZFHX4_HUMAN	3.6e-07	32.35	Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1	[more]
ZFHX4_CHICK	6.1e-07	51.02	Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2	[more]
YPRO_OWEFU	1.0e-06	50.00	Uncharacterized proline-rich protein (Fragment) OS=Owenia fusiformis PE=4 SV=1	[more]

BLAST of ClCG02G002030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0V0S3U7_9BILA	3.9e-08	35.09	Mediator of RNA polymerase II transcription subunit 26 (Fragment) OS=Trichinella...	[more]
A0A0V0S3U7_9BILA	8.9e-05	29.85	Mediator of RNA polymerase II transcription subunit 26 (Fragment) OS=Trichinella...	[more]
A0A0D2X0C1_CAPO3	6.2e-06	50.98	Uncharacterized protein OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_000...	[more]
A0A0E9NG61_9ASCO	2.0e-04	37.97	Uncharacterized protein OS=Saitoella complicata NRRL Y-17804 GN=G7K_2851-t1 PE=4...	[more]
D3P6N3_AZOS1	6.8e-05	32.29	Uncharacterized protein OS=Azospirillum sp. (strain B510) GN=AZL_d04860 PE=4 SV=...	[more]

BLAST of ClCG02G002030 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13340.1	1.5e-08	50.00	Leucine-rich repeat (LRR) family protein	[more]
AT4G18670.1	1.3e-07	47.62	Leucine-rich repeat (LRR) family protein	[more]
AT1G70460.1	2.9e-07	39.44	root hair specific 10	[more]
AT5G07740.1	3.8e-07	49.21	actin binding	[more]
AT3G22800.1	3.8e-07	46.43	Leucine-rich repeat (LRR) family protein	[more]

BLAST of ClCG02G002030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|954479169\|gb\|KRZ09095.1\|	4.2e-08	34.21	Mediator of RNA polymerase II transcription subunit 26, partial [Trichinella zim...	[more]
gi\|954479169\|gb\|KRZ09095.1\|	6.3e-04	46.30	Mediator of RNA polymerase II transcription subunit 26, partial [Trichinella zim...	[more]
gi\|749885730\|gb\|KIJ55098.1\|	1.8e-03	39.06	hypothetical protein M422DRAFT_73197 [Sphaerobolus stellatus SS14]	[more]
gi\|612387327\|ref\|XP_007509184.1\|	1.0e-06	51.72	predicted protein [Bathycoccus prasinos]	[more]
gi\|551609592\|ref\|XP_005785990.1\|	4.0e-06	55.56	hypothetical protein EMIHUDRAFT_111701 [Emiliania huxleyi CCMP1516]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G002030.1	ClCG02G002030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31429	FAMILY NOT NAMED	coord: 44..127 score: 1.7
None	No IPR available	PANTHER	PTHR31429:SF10	SUBFAMILY NOT NAMED	coord: 44..127 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G002030	Csa7G043020	Cucumber (Chinese Long) v2	cuwcgB546
ClCG02G002030	Cla007656	Watermelon (97103) v1	wcgwmB206
ClCG02G002030	Cla97C02G028430	Watermelon (97103) v2	wcgwmbB138
ClCG02G002030	Bhi05G001189	Wax gourd	wcgwgoB266
ClCG02G002030	CSPI07G03600	Wild cucumber (PI 183967)	cpiwcgB574
ClCG02G002030	CmaCh11G018140	Cucurbita maxima (Rimu)	cmawcgB102
ClCG02G002030	CmaCh19G009120	Cucurbita maxima (Rimu)	cmawcgB460
ClCG02G002030	CmoCh11G018890	Cucurbita moschata (Rifu)	cmowcgB094
ClCG02G002030	Lsi11G014390	Bottle gourd (USVL1VR-Ls)	lsiwcgB097
ClCG02G002030	Cp4.1LG15g07340	Cucurbita pepo (Zucchini)	cpewcgB233
ClCG02G002030	Cp4.1LG04g03650	Cucurbita pepo (Zucchini)	cpewcgB596
ClCG02G002030	CsGy7G003250	Cucumber (Gy14) v2	cgybwcgB506
ClCG02G002030	Carg19164	Silver-seed gourd	carwcgB0851
ClCG02G002030	Carg27147	Silver-seed gourd	carwcgB0296
ClCG02G002030	CsaV3_7G003470	Cucumber (Chinese Long) v3	cucwcgB571

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G002030	Cucumber (Chinese Long) v3	cucwcgB141
ClCG02G002030	Cucumber (Chinese Long) v3	cucwcgB219
ClCG02G002030	Cucumber (Chinese Long) v3	cucwcgB476
ClCG02G002030	Watermelon (97103) v2	wcgwmbB139
ClCG02G002030	Watermelon (97103) v2	wcgwmbB135
ClCG02G002030	Wax gourd	wcgwgoB305
ClCG02G002030	Wax gourd	wcgwgoB310
ClCG02G002030	Watermelon (Charleston Gray)	wcgwcgB047
ClCG02G002030	Watermelon (Charleston Gray)	wcgwcgB088
ClCG02G002030	Watermelon (Charleston Gray)	wcgwcgB116
ClCG02G002030	Cucumber (Gy14) v1	cgywcgB023
ClCG02G002030	Cucumber (Gy14) v1	cgywcgB072
ClCG02G002030	Cucumber (Gy14) v1	cgywcgB248
ClCG02G002030	Cucurbita maxima (Rimu)	cmawcgB494
ClCG02G002030	Cucurbita maxima (Rimu)	cmawcgB532
ClCG02G002030	Cucurbita moschata (Rifu)	cmowcgB459
ClCG02G002030	Cucurbita moschata (Rifu)	cmowcgB484
ClCG02G002030	Cucurbita moschata (Rifu)	cmowcgB529
ClCG02G002030	Cucurbita moschata (Rifu)	cmowcgB576
ClCG02G002030	Wild cucumber (PI 183967)	cpiwcgB134
ClCG02G002030	Wild cucumber (PI 183967)	cpiwcgB218
ClCG02G002030	Wild cucumber (PI 183967)	cpiwcgB478
ClCG02G002030	Cucumber (Chinese Long) v2	cuwcgB128
ClCG02G002030	Cucumber (Chinese Long) v2	cuwcgB456
ClCG02G002030	Melon (DHL92) v3.5.1	mewcgB092
ClCG02G002030	Melon (DHL92) v3.5.1	mewcgB195
ClCG02G002030	Melon (DHL92) v3.5.1	mewcgB519
ClCG02G002030	Watermelon (97103) v1	wcgwmB211
ClCG02G002030	Watermelon (97103) v1	wcgwmB178
ClCG02G002030	Watermelon (97103) v1	wcgwmB194
ClCG02G002030	Cucurbita pepo (Zucchini)	cpewcgB267
ClCG02G002030	Cucurbita pepo (Zucchini)	cpewcgB665
ClCG02G002030	Bottle gourd (USVL1VR-Ls)	lsiwcgB058
ClCG02G002030	Bottle gourd (USVL1VR-Ls)	lsiwcgB128
ClCG02G002030	Cucumber (Gy14) v2	cgybwcgB123
ClCG02G002030	Cucumber (Gy14) v2	cgybwcgB198
ClCG02G002030	Melon (DHL92) v3.6.1	medwcgB190
ClCG02G002030	Melon (DHL92) v3.6.1	medwcgB514
ClCG02G002030	Silver-seed gourd	carwcgB0032
ClCG02G002030	Silver-seed gourd	carwcgB0329
ClCG02G002030	Silver-seed gourd	carwcgB0624