ClCG02G000790 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000790
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	(R)-limonene synthase, putative
Location	CG_Chr02 : 868314 .. 869115 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCCATGCCTTAAGAAAGCAGTATGAAGTTAATGATAAACTTTTAAAAGTTTACATTTGATTTACATTATTCTAAATCATTATTATCAAATTTAACTTAATTTTTACAGTGGGTAGATTTGTGCAAATCTTATATGTTGGAGCCAAAGTGGTACTACACCAATTGTAAACCTAACATTGGAAGAATATTTAGATAATGCATGGATTTCGATATCAGGACCAGTTATGTTAATTCATTCATATGTTTTCGTAACATCTCCAAAGATTGAAAATATGGAGAGCTTGGAACAATATATTGATATAATTCGTTGGGCATCAACAATTTTGTGACTTTGTGATGATCTTGGAATATCATCGGTATGTGAACTTTAATGTGTCTTGATACCTTGATTTAAGAAAAAAATATCATTTATCTTACCTTTTATTGTTTATGCATTTTGAAATTTTTATTAACTAATATAGTTATATGATGGATAAACTTTATTCAAGATGAATTAGAAAGAGGTGATGTCCCAAAATCAATACAATGTTATATGAATGACACAAGAGCTTTAGAGAGTAATGCTCGTGAACATATAAGGCATTTGATTGATGAAACATGGAAGAAGTTGAATAAGGTCGAAGTCGAAAATTCTGTCTTCCCTCAAGTTTTCATGGAGGGAGTTAAGAATCTTGCTAGAATGGCTCAATGCATGTATCAACATGGGGATGGACATGGCATAGGACATCAAGAAACAAAAAATCGTGTAATGTCTCTACTTATTCAACTGATTTCCATTCATCCATTGAGTGAATAA

mRNA sequence

ATGTCATTCCATGCCTTAAGAAAGCAGTATGAAGTTAATGATAAACTTTTAAAAATTTGTGCAAATCTTATATGTTGGAGCCAAAGTGGTACTACACCAATTGTAAACCTAACATTGGAAGAATATTTAGATAATGCATGGATTTCGATATCAGGACCAGTTATGTTAATTCATTCATATGTTTTCGTAACATCTCCAAAGATTGAAAATATGGAGAGCTTGGAACAATATATTGATATAATTCATGAATTAGAAAGAGGTGATGTCCCAAAATCAATACAATGTTATATGAATGACACAAGAGCTTTAGAGAGTAATGCTCGTGAACATATAAGGCATTTGATTGATGAAACATGGAAGAAGTTGAATAAGGTCGAAGTCGAAAATTCTGTCTTCCCTCAAGTTTTCATGGAGGGAGTTAAGAATCTTGCTAGAATGGCTCAATGCATGTATCAACATGGGGATGGACATGGCATAGGACATCAAGAAACAAAAAATCGTGTAATGTCTCTACTTATTCAACTGATTTCCATTCATCCATTGAGTGAATAA

Coding sequence (CDS)

ATGTCATTCCATGCCTTAAGAAAGCAGTATGAAGTTAATGATAAACTTTTAAAAATTTGTGCAAATCTTATATGTTGGAGCCAAAGTGGTACTACACCAATTGTAAACCTAACATTGGAAGAATATTTAGATAATGCATGGATTTCGATATCAGGACCAGTTATGTTAATTCATTCATATGTTTTCGTAACATCTCCAAAGATTGAAAATATGGAGAGCTTGGAACAATATATTGATATAATTCATGAATTAGAAAGAGGTGATGTCCCAAAATCAATACAATGTTATATGAATGACACAAGAGCTTTAGAGAGTAATGCTCGTGAACATATAAGGCATTTGATTGATGAAACATGGAAGAAGTTGAATAAGGTCGAAGTCGAAAATTCTGTCTTCCCTCAAGTTTTCATGGAGGGAGTTAAGAATCTTGCTAGAATGGCTCAATGCATGTATCAACATGGGGATGGACATGGCATAGGACATCAAGAAACAAAAAATCGTGTAATGTCTCTACTTATTCAACTGATTTCCATTCATCCATTGAGTGAATAA

Protein sequence

MSFHALRKQYEVNDKLLKICANLICWSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYIDIIHELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIHPLSE

Homology

[Close]

BLAST of ClCG02G000790 vs. Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.9e-41
Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 1


Query: 38  TLEEYLDNAWISISGPVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-------------- 97
           +L+EY++NAWISI  P +L+H+Y FVT+P   E ++ LE+Y +II               
Sbjct: 436 SLQEYIENAWISIGAPTILVHAYFFVTNPITKEALDCLEEYPNIIRWSSIIARLADDLGT 495

Query: 98  ---ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEG 157
              EL+RGDVPK+IQCYMN+T A E  ARE+I++LI  TWKK+NK    +S F  +F+E 
Sbjct: 496 STDELKRGDVPKAIQCYMNETGASEEGAREYIKYLISATWKKMNKDRAASSPFSHIFIEI 555

Query: 158 VKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIH 180
             NLARMAQC+YQHGDGHG+G++ETK+R++SLLIQ I ++
Sbjct: 556 ALNLARMAQCLYQHGDGHGLGNRETKDRILSLLIQPIPLN 595

[Close]

BLAST of ClCG02G000790 vs. Swiss-Prot
Match: ATESY_VITVI ((-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-39
Identity = 87/169 (51.48%), Postives = 111/169 (65.68%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-- 85
           W  S  TP    +L+EY+ N+WISISGPV+L+H+Y  V +P   E ++SLE+Y +II   
Sbjct: 420 WYYSRYTP----SLQEYISNSWISISGPVILVHAYFLVANPITKEALQSLERYHNIIRWS 479

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM +T A E +AR+H  +LI ETWKKLN+   
Sbjct: 480 SMILRLSDDLGTSLDELKRGDVPKSIQCYMYETGASEEDARKHTSYLIGETWKKLNEDGA 539

Query: 146 ENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLI 177
             S FP+ F+    NLARMAQCMYQHGDGHGI + ET++RV+SLL++ I
Sbjct: 540 VESPFPETFIGIAMNLARMAQCMYQHGDGHGIEYGETEDRVLSLLVEPI 584

[Close]

BLAST of ClCG02G000790 vs. Swiss-Prot
Match: TPS10_RICCO (Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.5e-39
Identity = 98/203 (48.28%), Postives = 125/203 (61.58%), Query Frame = 1


Query: 1   MSFHALRKQ-YEVNDKLLKICANLIC-------WSQSGTTPIVNLTLEEYLDNAWISISG 60
           M++ ALR+Q + +   L K  A+L         W   G TP    TL+EY+DNAWISIS 
Sbjct: 351 MAYDALREQGFHIIPYLKKAWADLCKSYLVEAKWYYIGYTP----TLQEYMDNAWISISA 410

Query: 61  PVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-----------------ELERGDVPKSIQ 120
           PV+L+H+Y    SP   E ++SL++Y DII                  EL+RGD PKSIQ
Sbjct: 411 PVILVHAYFLEGSPITNEALKSLKEYPDIIQWSSMILRFADDLGTSSDELKRGDNPKSIQ 470

Query: 121 CYMNDTRALESNAREHIRHLIDETWKKLNKV-EVENSVFPQVFMEGVKNLARMAQCMYQH 177
           CY+ +T   E  AREHI++LI ETWKK+NK  E  +S F ++F+E   NLARMAQCMYQH
Sbjct: 471 CYIYETGVSELKAREHIQYLIGETWKKINKEREYIDSPFSKIFIEVATNLARMAQCMYQH 530

[Close]

BLAST of ClCG02G000790 vs. Swiss-Prot
Match: ATESY_MAGGA (Alpha-terpineol synthase, chloroplastic OS=Magnolia grandiflora PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.3e-35
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYV----FVTSPK----IENMESLEQY 85
           W  SG TP    TL+EYL+NAWISI+GPV+L+H+YV     +T       + + ES+ Q+
Sbjct: 423 WYYSGYTP----TLDEYLNNAWISIAGPVILVHAYVSMIQMITKEALLDCVGSYESIMQW 482

Query: 86  IDII-----------HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVE 145
             +I            ELERGDVPKSIQCYM++  A E  ARE +R  I + WKK+NK +
Sbjct: 483 SSMILRLADDLATSTDELERGDVPKSIQCYMHENTASEVVAREQMRARISDIWKKMNK-D 542

Query: 146 VENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISI 179
           V  S  PQ F     NLARMAQCMYQHGDGHG  H+E+K+ ++SL+++ I +
Sbjct: 543 VALSPLPQPFKAAAVNLARMAQCMYQHGDGHGNPHRESKDHILSLVVEPIQL 589

[Close]

BLAST of ClCG02G000790 vs. Swiss-Prot
Match: GTPS_CITLI (Gamma-terpinene synthase, chloroplastic OS=Citrus limon PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 81/170 (47.65%), Postives = 101/170 (59.41%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-- 85
           W  SG  P    TL+EY++NAWIS++ PVML+H+Y F  +P   E +E L+   DII   
Sbjct: 435 WYNSGYIP----TLQEYMENAWISVTAPVMLLHAYAFTANPITKEALEFLQDSPDIIRIS 494

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM++T   E  AREHIR LI ETW K+N    
Sbjct: 495 SMIVRLEDDLGTSSDELKRGDVPKSIQCYMHETGVSEDEAREHIRDLIAETWMKMNSARF 554

Query: 146 ENSVF-PQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLI 177
            N  + P VF+    NL RM+QCMY +GDGHG+  + TK+RV+SL I  I
Sbjct: 555 GNPPYLPDVFIGIAMNLVRMSQCMYLYGDGHGV-QENTKDRVLSLFIDPI 599

[Close]

BLAST of ClCG02G000790 vs. TrEMBL
Match: F6HV95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00010 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41
Identity = 93/167 (55.69%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKIEN-MESLEQYIDIIH-- 85
           W  SG  P    TL+EY+ NAWISISGPV+L+HSY FV +P  E  ++SLE+Y +IIH  
Sbjct: 381 WYYSGYKP----TLQEYISNAWISISGPVLLVHSYFFVANPITEEALQSLERYHNIIHWS 440

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM +T A E +AR+HI +LI ETWKKLN+   
Sbjct: 441 SMILRLSDDLGTSLDELKRGDVPKSIQCYMYETGASEEDARKHISYLIGETWKKLNEDRA 500

Query: 146 ENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQ 175
             S FP+ F+    NLARMAQCMYQHGDGHGI + ETK+RV+SLL++
Sbjct: 501 VESPFPETFIGIATNLARMAQCMYQHGDGHGIEYGETKDRVLSLLVE 543

[Close]

BLAST of ClCG02G000790 vs. TrEMBL
Match: E5GAG7_VITVI ((E)-beta-ocimene/myrcene synthase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-40
Identity = 92/172 (53.49%), Postives = 117/172 (68.02%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-- 85
           W  SG  P    TL+EY+ NAWIS+SGPV+L+H+Y FVT+P   E ++SLE+Y +II   
Sbjct: 420 WYYSGYKP----TLQEYISNAWISMSGPVVLVHAYFFVTNPITKEALQSLERYHNIIRWS 479

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM +T A E +AR+HI +LI+ TWKKLN+   
Sbjct: 480 SMISRLSDDLGTSLDELKRGDVPKSIQCYMYETGASEEDARKHISYLIEGTWKKLNEDGA 539

Query: 146 ENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIH 180
             S FP++F+    N ARMAQCMYQHGDGHGI   ETK+RV+SLLI+ I +H
Sbjct: 540 VESPFPEIFIRIATNFARMAQCMYQHGDGHGIEDGETKDRVLSLLIEPIPVH 587

[Close]

BLAST of ClCG02G000790 vs. TrEMBL
Match: A0A0A0LQ61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299910 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.5e-40
Identity = 82/102 (80.39%), Postives = 92/102 (90.20%), Query Frame = 1


Query: 82  HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEGVK 141
           +EL RGDVPKSIQCYM DT   ES+AR+HIRHLIDETWKKLNKV+VENS+FP+VF+E  K
Sbjct: 10  NELARGDVPKSIQCYMKDTGGSESDARKHIRHLIDETWKKLNKVQVENSIFPKVFIERAK 69

Query: 142 NLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIHPLSE 184
           N+ARMAQCMYQ+GDGHGI HQETK+RVMSLLIQ ISIHP SE
Sbjct: 70  NVARMAQCMYQYGDGHGIVHQETKDRVMSLLIQQISIHPYSE 111

[Close]

BLAST of ClCG02G000790 vs. TrEMBL
Match: F6I6J8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g00090 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.8e-40
Identity = 90/167 (53.89%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKIEN-MESLEQYIDIIH-- 85
           W  SG  P    TL+EY+ NAWISISGPV+L+H+Y FVT+P  E  ++SLE+Y +II   
Sbjct: 180 WYYSGYKP----TLQEYISNAWISISGPVVLVHAYFFVTNPITEEALQSLERYHNIIRWS 239

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM++T A E  AR+HI +LI +TWKKLN+   
Sbjct: 240 SMISRLSDDLGTSLDELKRGDVPKSIQCYMHETGASEEEARKHISYLIGDTWKKLNEDRA 299

Query: 146 ENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQ 175
             S FP+ F+    NLARMAQCMYQHGDG+GI + ETK+RV+SLL++
Sbjct: 300 VESPFPETFIGIATNLARMAQCMYQHGDGYGIEYGETKDRVLSLLVE 342

[Close]

BLAST of ClCG02G000790 vs. TrEMBL
Match: A5AR04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003091 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.9e-39
Identity = 92/172 (53.49%), Postives = 115/172 (66.86%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKI-ENMESLEQYIDIIH-- 85
           W  SG  P    TL+EY+ NAWIS+SGPV+L+H+Y FVT+P   E ++SLE+Y +II   
Sbjct: 416 WYYSGYKP----TLQEYISNAWISMSGPVVLVHAYFFVTNPITKEALQSLERYHNIIRWS 475

Query: 86  ---------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEV 145
                          EL+RGDVPKSIQCYM +T A E +AR+HI +LI  TWKKLN+   
Sbjct: 476 SMISRLSDDLGTSLDELKRGDVPKSIQCYMYETGASEEDARKHISYLIXGTWKKLNEDGA 535

Query: 146 ENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIH 180
             S FP+ F+    N ARMAQCMYQHGDGHGI   ETK+RV+SLLI+ I I+
Sbjct: 536 VESPFPETFIRIATNFARMAQCMYQHGDGHGIEDGETKDRVLSLLIEPIPIN 583

[Close]

BLAST of ClCG02G000790 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-28
Identity = 73/176 (41.48%), Postives = 97/176 (55.11%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSY-VFVTSPKIENMESLEQYIDII--- 85
           W + G  P    +LEEY+ NAWISIS P +LIH Y VF     ++N+E+L Q+   I   
Sbjct: 423 WYKRGYKP----SLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRC 482

Query: 86  ---------------HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLN--- 145
                           EL RGDV KS+QCYM++T A E  AR+H+  +I + W  +N   
Sbjct: 483 SATVLRLANDLGTSPTELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSET 542

Query: 146 KVEVENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQ-ETKNRVMSLLIQLISI 179
           K    +S   + F E   NLARM+QCMYQ+GDGHG   + +T +RV SLL+  I +
Sbjct: 543 KTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIPL 594

[Close]

BLAST of ClCG02G000790 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-28
Identity = 73/176 (41.48%), Postives = 97/176 (55.11%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSY-VFVTSPKIENMESLEQYIDII--- 85
           W + G  P    +LEEY+ NAWISIS P +LIH Y VF     ++N+E+L Q+   I   
Sbjct: 423 WYKRGYKP----SLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRC 482

Query: 86  ---------------HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLN--- 145
                           EL RGDV KS+QCYM++T A E  AR+H+  +I + W  +N   
Sbjct: 483 SATVLRLANDLGTSPTELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSET 542

Query: 146 KVEVENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQ-ETKNRVMSLLIQLISI 179
           K    +S   + F E   NLARM+QCMYQ+GDGHG   + +T +RV SLL+  I +
Sbjct: 543 KTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIPL 594

[Close]

BLAST of ClCG02G000790 vs. TAIR10
Match: AT2G24210.1 (AT2G24210.1 terpene synthase 10)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 74/175 (42.29%), Postives = 98/175 (56.00%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSY-VFVTSPKIENMESLEQY------- 85
           W +SG  P     LEEY+ NA ISIS P + +H Y VF     I+ +E+L Q+       
Sbjct: 420 WYKSGHKP----NLEEYMQNARISISSPTIFVHFYCVFSDQLSIQVLETLSQHQQNVVRC 479

Query: 86  -----------IDIIHELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLN--K 145
                      +    EL RGDV KSIQCYM++T A E  AR H+R +I++ W ++N  K
Sbjct: 480 SSSVFRLANDLVTSPDELARGDVCKSIQCYMSETGASEDKARSHVRQMINDLWDEMNYEK 539

Query: 146 VEVENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQ-ETKNRVMSLLIQLISI 179
           +   +S+    FME V NLARM+QCMYQ+GDGHG   + +  +RVMSLL   I +
Sbjct: 540 MAHSSSILHHDFMETVINLARMSQCMYQYGDGHGSPEKAKIVDRVMSLLFNPIPL 590

[Close]

BLAST of ClCG02G000790 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 8.8e-27
Identity = 71/177 (40.11%), Postives = 96/177 (54.24%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSY-VFVTSPKIENMESL-EQYIDIIH- 85
           W + G  P V    EEY+ NAWISIS P MLIH Y  F     ++ +ESL +Q  D++  
Sbjct: 425 WYKGGYKPSV----EEYMQNAWISISAPTMLIHFYCAFSGQISVQILESLVQQQQDVVRC 484

Query: 86  ----------------ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLN--- 145
                           EL RGDV KS+QCYM++T   E  AR H++ +I  TW ++N   
Sbjct: 485 SATVLRLANDLATSPDELARGDVLKSVQCYMHETGVSEEEARTHVQQMISHTWDEMNYEA 544

Query: 146 -KVEVENSVFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQ-ETKNRVMSLLIQLISI 179
                 +S+  + F+E   NLARM+QCMYQHGDGHG   + +  +RV +LL+  I +
Sbjct: 545 RTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCPDKAKIVDRVQTLLVDPIPL 597

[Close]

BLAST of ClCG02G000790 vs. TAIR10
Match: AT4G16740.1 (AT4G16740.1 terpene synthase 03)

HSP 1 Score: 100.9 bits (250), Expect = 8.5e-22
Identity = 62/172 (36.05%), Postives = 91/172 (52.91%), Query Frame = 1


Query: 26  WSQSGTTPIVNLTLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYI------- 85
           W +SG  P      EEY+ N WIS S P +L+H +  ++   ++ + S    +       
Sbjct: 401 WYKSGYKP----NFEEYMQNGWISSSVPTILLHLFCLLSDQTLDILGSYNHSVVRSSATI 460

Query: 86  -----DII---HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENS 145
                D+     EL RGD  KS+QC+M++T A E+ +R +I+ +I   W  LN +E ++ 
Sbjct: 461 LRLANDLATSSEELARGDTMKSVQCHMHETGASEAESRAYIQGIIGVAWDDLN-MEKKSC 520

Query: 146 VFPQVFMEGVKNLARMAQCMYQHGDGHGIGHQ-ETKNRVMSLLIQLISIHPL 182
              Q F+E   NL R+AQC+YQ+GDGHG   + +T N V SLL     +HPL
Sbjct: 521 RLHQGFLEAAANLGRVAQCVYQYGDGHGCPDKAKTVNHVRSLL-----VHPL 562

[Close]

BLAST of ClCG02G000790 vs. NCBI nr
Match: gi|778670174|ref|XP_011649391.1| (PREDICTED: terpene synthase 10 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 4.4e-60
Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 38  TLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYIDII---------------- 97
           TLEEYLDNAWISISGPV+LIH+YVFVTSP +ENMESL+QY+D++                
Sbjct: 389 TLEEYLDNAWISISGPVVLIHAYVFVTSPTLENMESLKQYVDMVRWSSTILRLADDLGTS 448

Query: 98  -HELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEGV 157
            +EL RGDVPKSIQCYM DT   ES+AR+HIRHLIDETWKKLNKV+VENS+FP+VF+E  
Sbjct: 449 SNELARGDVPKSIQCYMKDTGGSESDARKHIRHLIDETWKKLNKVQVENSIFPKVFIERA 508

Query: 158 KNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIHPLSE 184
           KN+ARMAQCMYQ+GDGHGI HQETK+RVMSLLIQ ISIHP SE
Sbjct: 509 KNVARMAQCMYQYGDGHGIVHQETKDRVMSLLIQQISIHPYSE 551

[Close]

BLAST of ClCG02G000790 vs. NCBI nr
Match: gi|659122221|ref|XP_008461028.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 2.8e-59
Identity = 116/163 (71.17%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 38  TLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYIDIIH--------------- 97
           TLEEYLDNAWISISGPV+L+H+YVFVT+P +ENMESL+QY+D+I                
Sbjct: 430 TLEEYLDNAWISISGPVVLVHAYVFVTTPTLENMESLKQYVDVIRWSSTILRLADDLGTS 489

Query: 98  --ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEGV 157
             EL RGDVPKSIQCYMNDT + ES+AR+HIRHLIDETWKKLNKV+V+NS+FPQVF+E  
Sbjct: 490 SDELARGDVPKSIQCYMNDTGSSESDARKHIRHLIDETWKKLNKVQVQNSIFPQVFIERA 549

Query: 158 KNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIHPLSE 184
           KN+AR AQ MYQ+GDGHGIGHQETK+RVMSLLIQ ISIHP  E
Sbjct: 550 KNVARTAQFMYQYGDGHGIGHQETKDRVMSLLIQQISIHPYCE 592

[Close]

BLAST of ClCG02G000790 vs. NCBI nr
Match: gi|449465932|ref|XP_004150681.1| (PREDICTED: terpene synthase 10-like [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 116/161 (72.05%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 38  TLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYIDIIH--------------- 97
           TLEEYLDNAWISISG V+L+H+YVFVTS  +ENMESL+Q+ID+I                
Sbjct: 435 TLEEYLDNAWISISGTVLLVHTYVFVTSSTLENMESLKQHIDMIRWSSTILRLADDLGTS 494

Query: 98  --ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVEN--SVFPQVFME 157
             ELERGDVPKSIQCYMNDT A ESNARE+IRHLIDETWKKLNK EVEN  S+FP+VF+E
Sbjct: 495 SDELERGDVPKSIQCYMNDTGASESNAREYIRHLIDETWKKLNKTEVENNYSIFPRVFVE 554

Query: 158 GVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIH 180
             KNLARMAQCMYQ+GDGHG+G+QETK+RVMSLLI+ ISIH
Sbjct: 555 RAKNLARMAQCMYQYGDGHGMGYQETKDRVMSLLIEPISIH 595

[Close]

BLAST of ClCG02G000790 vs. NCBI nr
Match: gi|659122225|ref|XP_008461030.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-55
Identity = 118/208 (56.73%), Postives = 145/208 (69.71%), Query Frame = 1


Query: 1   MSFHALRKQ-YEVNDKLLKICANLI-------CWSQSGTTPIVNLTLEEYLDNAWISISG 60
           M+F  LR Q   V   L K+  +L         W   G  P    TL+EYLDNAW SISG
Sbjct: 389 MAFDVLRDQGINVIQYLKKVWVDLCKTYMVEATWYHDGYKP----TLKEYLDNAWTSISG 448

Query: 61  PVMLIHSYVFVTSPKIENMESLEQYIDIIH-----------------ELERGDVPKSIQC 120
           PV+L+H+YVFVTSP +++ME+L+QY D+I                  EL+RGDVPKSIQC
Sbjct: 449 PVILVHAYVFVTSPTLKDMENLKQYFDLIRYSSTILRLADDLGTSSDELKRGDVPKSIQC 508

Query: 121 YMNDTRALESNAREHIRHLIDETWKKLNKVEVENSVFPQVFMEGVKNLARMAQCMYQHGD 180
           YMNDT A ESNAR++I+HLIDETWKK+NK+EVEN + P+VF++  KNLARMAQCMYQ+GD
Sbjct: 509 YMNDTGASESNARKYIKHLIDETWKKMNKIEVENPIIPRVFVDRAKNLARMAQCMYQYGD 568

Query: 181 GHGIGHQETKNRVMSLLIQLISIHPLSE 184
           GHG  H+ETK+RVMSLLIQ IS+H   E
Sbjct: 569 GHGTAHEETKDRVMSLLIQPISVHSYGE 592

[Close]

BLAST of ClCG02G000790 vs. NCBI nr
Match: gi|659122004|ref|XP_008460926.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 4.2e-55
Identity = 112/161 (69.57%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 38  TLEEYLDNAWISISGPVMLIHSYVFVTSPKIENMESLEQYIDIIH--------------- 97
           TLEEYLDNAWISISGP +L+H+YVFVTSP +ENMESL+QY+D+I                
Sbjct: 432 TLEEYLDNAWISISGPAILVHAYVFVTSPTLENMESLKQYVDMIRWSSTILRLADDLGTS 491

Query: 98  --ELERGDVPKSIQCYMNDTRALESNAREHIRHLIDETWKKLNKVEVEN--SVFPQVFME 157
             ELERGDVPKSIQCYMNDT A E+ ARE+I HLIDETWKKLNK E EN  S++P+VF+E
Sbjct: 492 SDELERGDVPKSIQCYMNDTGASENIAREYIGHLIDETWKKLNKTEFENNYSIYPRVFIE 551

Query: 158 GVKNLARMAQCMYQHGDGHGIGHQETKNRVMSLLIQLISIH 180
             KNLARMAQCMYQ+GDGHG+G+QETK+RVMSLLI+ ISIH
Sbjct: 552 RAKNLARMAQCMYQYGDGHGMGYQETKDRVMSLLIEPISIH 592

The following BLAST results are available for this feature:

BLAST of ClCG02G000790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYRS_QUEIL	5.9e-41	51.88	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	[more]
ATESY_VITVI	5.5e-39	51.48	(-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1	[more]
TPS10_RICCO	9.5e-39	48.28	Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1	[more]
ATESY_MAGGA	6.3e-35	48.26	Alpha-terpineol synthase, chloroplastic OS=Magnolia grandiflora PE=1 SV=1	[more]
GTPS_CITLI	1.2e-33	47.65	Gamma-terpinene synthase, chloroplastic OS=Citrus limon PE=1 SV=1	[more]

BLAST of ClCG02G000790 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HV95_VITVI	1.9e-41	55.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00010 PE=3 SV=...	[more]
E5GAG7_VITVI	1.6e-40	53.49	(E)-beta-ocimene/myrcene synthase OS=Vitis vinifera PE=2 SV=1	[more]
A0A0A0LQ61_CUCSA	3.5e-40	80.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299910 PE=4 SV=1	[more]
F6I6J8_VITVI	7.8e-40	53.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g00090 PE=4 SV=...	[more]
A5AR04_VITVI	3.9e-39	53.49	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003091 PE=3 SV=1	[more]

BLAST of ClCG02G000790 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25820.1	2.1e-28	41.48	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25830.1	2.1e-28	41.48	terpene synthase-like sequence-1,8-cineole	[more]
AT2G24210.1	1.8e-27	42.29	terpene synthase 10	[more]
AT3G25810.1	8.8e-27	40.11	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G16740.1	8.5e-22	36.05	terpene synthase 03	[more]

BLAST of ClCG02G000790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670174\|ref\|XP_011649391.1\|	4.4e-60	72.39	PREDICTED: terpene synthase 10 [Cucumis sativus]	[more]
gi\|659122221\|ref\|XP_008461028.1\|	2.8e-59	71.17	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]
gi\|449465932\|ref\|XP_004150681.1\|	1.7e-56	72.05	PREDICTED: terpene synthase 10-like [Cucumis sativus]	[more]
gi\|659122225\|ref\|XP_008461030.1\|	1.5e-55	56.73	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]
gi\|659122004\|ref\|XP_008460926.1\|	4.2e-55	69.57	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005630	Terpene_synthase_metal-bd
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0016829	lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000790.1	ClCG02G000790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 83..121 score: 8.6E-7coord: 14..81 score: 4.
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 15..176 score: 5.2
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 19..174 score: 1.61
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 26..178 score: 5.5
None	No IPR available	PANTHER	PTHR31225:SF16	1,8-CINEOLE SYNTHASE 1, CHLOROPLASTIC-RELATED	coord: 26..178 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G000790	Cla007777	Watermelon (97103) v1	wcgwmB206

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G000790	Bottle gourd (USVL1VR-Ls)	lsiwcgB056
ClCG02G000790	Cucumber (Gy14) v2	cgybwcgB121
ClCG02G000790	Cucumber (Gy14) v2	cgybwcgB411
ClCG02G000790	Melon (DHL92) v3.6.1	medwcgB089
ClCG02G000790	Silver-seed gourd	carwcgB0785
ClCG02G000790	Silver-seed gourd	carwcgB1028
ClCG02G000790	Cucumber (Chinese Long) v3	cucwcgB139
ClCG02G000790	Cucumber (Chinese Long) v3	cucwcgB467
ClCG02G000790	Watermelon (97103) v2	wcgwmbB130
ClCG02G000790	Watermelon (97103) v2	wcgwmbB138
ClCG02G000790	Wax gourd	wcgwgoB289
ClCG02G000790	Wax gourd	wcgwgoB309
ClCG02G000790	Watermelon (Charleston Gray)	wcgwcgB087
ClCG02G000790	Cucumber (Gy14) v1	cgywcgB135
ClCG02G000790	Cucumber (Gy14) v1	cgywcgB440
ClCG02G000790	Cucurbita maxima (Rimu)	cmawcgB482
ClCG02G000790	Cucurbita maxima (Rimu)	cmawcgB534
ClCG02G000790	Cucurbita maxima (Rimu)	cmawcgB581
ClCG02G000790	Cucurbita moschata (Rifu)	cmowcgB480
ClCG02G000790	Cucurbita moschata (Rifu)	cmowcgB531
ClCG02G000790	Cucurbita moschata (Rifu)	cmowcgB579
ClCG02G000790	Wild cucumber (PI 183967)	cpiwcgB130
ClCG02G000790	Wild cucumber (PI 183967)	cpiwcgB468
ClCG02G000790	Cucumber (Chinese Long) v2	cuwcgB124
ClCG02G000790	Cucumber (Chinese Long) v2	cuwcgB447
ClCG02G000790	Melon (DHL92) v3.5.1	mewcgB091
ClCG02G000790	Watermelon (97103) v1	wcgwmB193
ClCG02G000790	Cucurbita pepo (Zucchini)	cpewcgB066
ClCG02G000790	Cucurbita pepo (Zucchini)	cpewcgB268
ClCG02G000790	Cucurbita pepo (Zucchini)	cpewcgB647
ClCG02G000790	Cucurbita pepo (Zucchini)	cpewcgB664